Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 2.1e-116 422.5 238 100.0
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.8e-80 303.1 205 76.6
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 2.0e-79 299.7 204 77.0
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 3.5e-79 298.9 205 76.1
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 5.9e-79 298.1 205 76.1
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 7.7e-79 297.7 194 78.9
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 7.7e-79 297.7 209 75.6
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.7e-78 296.6 208 75.0
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 1.5e-77 293.5 194 75.3
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.9e-77 293.1 187 76.5
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.2e-76 290.4 196 74.0
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 3.6e-76 288.9 222 69.8
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 8.0e-76 287.7 206 71.8
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 1.0e-75 287.3 194 73.7
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.0e-75 287.3 196 73.0
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.0e-75 287.3 194 72.7
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 1.8e-75 286.6 194 75.3
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 8.8e-75 284.3 190 76.3
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.0e-74 283.1 192 75.0
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 5.7e-74 281.6 202 71.8
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 7.5e-74 281.2 195 71.8
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 9.8e-74 280.8 204 71.1
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 2.2e-73 279.6 246 63.8
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.2e-73 279.6 196 71.4
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 6.3e-73 278.1 205 69.8
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 6.3e-73 278.1 196 73.0
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 8.3e-73 277.7 195 72.8
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.1e-72 277.3 198 72.2
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.4e-72 276.9 187 77.5
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.4e-72 276.9 196 73.5
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.4e-72 276.9 199 71.9
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.8e-72 276.6 187 73.8
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.8e-72 276.6 199 73.4
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.4e-72 276.2 187 77.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.1e-72 275.8 200 69.0
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 3.1e-72 275.8 206 69.9
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 7.0e-72 274.6 206 69.4
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 7.0e-72 274.6 193 72.0
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 7.0e-72 274.6 193 72.5
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 7.0e-72 274.6 199 70.4
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 7.0e-72 274.6 188 73.9
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 7.0e-72 274.6 217 67.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 9.1e-72 274.2 195 74.4
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-71 273.9 193 71.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-71 273.9 193 71.0
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 2.0e-71 273.1 198 70.2
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.7e-71 272.7 211 67.8
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 3.5e-71 272.3 192 72.4
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 1.0e-70 270.8 201 67.7
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.3e-70 270.4 193 70.5
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.3e-70 270.4 174 77.6
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 5.0e-70 268.5 188 73.9
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 5.0e-70 268.5 187 73.8
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 6.6e-70 268.1 207 68.6
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.6e-70 267.7 199 69.3
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.1e-69 267.3 189 73.0
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 5.5e-69 265.0 195 68.7
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 1.2e-68 263.8 200 71.5
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.0e-67 260.8 194 68.6
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 1.0e-67 260.8 187 70.6
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.8e-67 260.0 190 72.1
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.3e-67 259.6 172 73.3
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 5.2e-67 258.5 159 80.5
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 8.9e-67 257.7 201 66.2
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 4.4e-66 255.4 188 67.6
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 7.5e-66 254.6 191 70.7
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.3e-65 253.8 194 64.9
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 2.2e-65 253.1 205 65.4
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.2e-63 247.3 179 70.4
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.0e-63 246.5 177 70.6
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 2.3e-62 243.0 177 70.1
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 6.6e-62 241.5 197 64.0
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.1e-61 240.7 230 60.0
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.9e-61 240.0 206 62.6
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 5.6e-61 238.4 184 67.4
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 7.3e-61 238.0 199 63.8
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 1.2e-60 237.3 206 60.7
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 2.1e-60 236.5 197 61.9
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 2.8e-60 236.1 134 82.8
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 3.6e-60 235.7 196 63.3
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 4.0e-59 232.3 187 66.3
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 8.9e-59 231.1 197 63.5
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.2e-58 230.7 152 75.0
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.6e-58 229.6 200 59.5
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 4.4e-58 228.8 198 63.6
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.3e-57 227.3 272 50.0
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 1.7e-57 226.9 198 63.1
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 1.7e-57 226.9 198 63.1
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.2e-57 226.5 202 62.4
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.0e-55 219.9 201 60.7
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 2.1e-44 183.3 207 53.1
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 5.4e-40 168.7 167 54.5
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 1.2e-39 167.5 99 77.8
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 3.9e-38 162.5 99 76.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.3e-37 159.5 160 53.8
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 3.1e-35 152.9 225 44.0
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 4.4e-34 149.1 130 63.1
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.6e-31 140.6 153 49.0
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 2.1e-31 140.2 127 60.6
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.3e-30 137.5 136 59.6
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.1e-24 117.9 64 84.4
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 7.1e-24 115.2 62 87.1
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 2.7e-23 113.2 96 66.7
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 4.0e-19 99.4 102 54.9
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 4.5e-18 95.9 113 46.0
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.9e-13 80.5 105 47.6
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.5e-13 80.1 60 70.0
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 5.6e-13 79.0 93 52.7
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 7.4e-13 78.6 157 35.0
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 2.1e-12 77.0 159 28.9
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.2e-12 75.5 73 57.5
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 5.3e-11 72.4 59 62.7
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 4.2e-08 62.8 138 30.4
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.3e-06 57.8 50 60.0


User provided reference genes

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