Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A834T31 Lonicera japonica HOM05D029725 ORTHO05D003000 3.1e-84 315.1 158 100.0
Lj5A829G20 Lonicera japonica HOM05D029725 ORTHO05D003000 1.2e-16 90.5 143 37.8
Lj5A830G8 Lonicera japonica HOM05D029725 ORTHO05D003000 2.1e-16 89.7 125 40.8
DCAR_002571 Daucus carota HOM05D002658 ORTHO05D003000 2.8e-08 62.8 148 31.8
CSS0029052 Camellia sinensis var. sinensis HOM05D002658 ORTHO05D003000 3.6e-08 62.4 145 31.0
Lj3C850T20 Lonicera japonica HOM05D002658 ORTHO05D003000 3.6e-08 62.4 144 31.9
Hma1.2p1_1683F.1_g297380 Hydrangea macrophylla HOM05D002658 ORTHO05D003000 6.2e-08 61.6 152 31.6
DCAR_023453 Daucus carota HOM05D002658 ORTHO05D003000 1.4e-07 60.5 146 30.1
Lj5A831G12 Lonicera japonica HOM05D029725 ORTHO05D234351 1.8e-07 60.1 83 38.6
Phvul.011G030600 Phaseolus vulgaris HOM05D002658 ORTHO05D003000 2.3e-07 59.7 143 30.1
Actinidia04307 Actinidia chinensis HOM05D002658 ORTHO05D003000 4.0e-07 58.9 137 29.2
BcaB06g25912 Brassica carinata HOM05D002658 ORTHO05D003000 5.2e-07 58.5 147 29.9
SalBow2G3648 Salvia bowleyana HOM05D002658 ORTHO05D003000 5.2e-07 58.5 147 27.9
Manes.04G057000 Manihot esculenta HOM05D002658 ORTHO05D003000 6.8e-07 58.2 149 28.9
CARHR093990 Cardamine hirsuta HOM05D002658 ORTHO05D003000 1.2e-06 57.4 139 28.1
Dinv17606 Davidia involucrata HOM05D002658 ORTHO05D003000 1.2e-06 57.4 139 30.9
Nitab4.5_0000739g0010 Nicotiana tabacum HOM05D002658 ORTHO05D003000 1.5e-06 57.0 153 29.4
Nitab4.5_0002873g0020 Nicotiana tabacum HOM05D002658 ORTHO05D003000 1.5e-06 57.0 153 29.4
Sabra07G0059800 Salix brachista HOM05D002658 ORTHO05D003000 2.6e-06 56.2 141 29.1
SalBow6G5085 Salvia bowleyana HOM05D002658 ORTHO05D003000 2.6e-06 56.2 151 27.8
Solyc02g014310.4 Solanum lycopersicum HOM05D002658 ORTHO05D003000 2.6e-06 56.2 152 28.9
Sopen02g003410 Solanum pennellii HOM05D002658 ORTHO05D003000 2.6e-06 56.2 152 28.9
TPR.G32352 Trifolium pratense HOM05D002658 ORTHO05D003000 2.6e-06 56.2 137 30.7
Carub.0003s1839 Capsella rubella HOM05D002658 ORTHO05D003000 3.4e-06 55.8 143 27.3
Psat7g173280 Pisum sativum HOM05D002658 ORTHO05D003000 3.4e-06 55.8 141 29.1
Ca_19028_v3 Cicer arietinum L. HOM05D002658 ORTHO05D003000 4.4e-06 55.5 140 27.9
Thhalv10020940m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 5.8e-06 55.1 150 28.0
Manes.04G053300 Manihot esculenta HOM05D002658 ORTHO05D003000 5.8e-06 55.1 149 28.2
PSO063G2038 Papaver somniferum HOM05D002658 ORTHO05D003000 5.8e-06 55.1 146 29.5
Potri.007G071100 Populus trichocarpa HOM05D002658 ORTHO05D003000 5.8e-06 55.1 144 27.8
Sc06g0007980 Simmondsia chinensis HOM05D002658 ORTHO05D003000 9.9e-06 54.3 146 29.5


User provided reference genes

Program Settings