Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A81T87 Lonicera japonica HOM05D053520 ORTHO05D001590 9.4e-195 683.3 343 100.0
Lj2P970T52 Lonicera japonica HOM05D053520 ORTHO05D001590 1.9e-14 84.3 77 57.1
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 6.4e-10 69.3 135 28.1
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.2e-09 67.0 90 37.8
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.2e-09 66.6 90 37.8
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.2e-09 66.6 90 37.8
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-09 66.6 95 33.7
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-09 66.6 95 33.7
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 5.4e-09 66.2 182 27.5
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 4.6e-08 63.2 90 36.7
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 6.0e-08 62.8 96 35.4
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-07 62.0 99 33.3
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 1.0e-07 62.0 114 31.6
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-07 62.0 95 32.6
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.3e-07 61.6 87 36.8
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.8e-07 61.2 90 36.7
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-07 59.7 141 28.4
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-07 59.7 90 32.2
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.1e-07 59.7 141 27.7
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-07 59.3 94 31.9
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-07 59.3 94 31.9
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-07 59.3 95 32.6
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.7e-07 59.3 58 37.9
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.7e-07 58.9 103 34.0
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-07 58.9 95 32.6
RcHm_v2.0_Chr3g0460221 Rosa chinensis HOM05D001313 ORTHO05D001590 8.7e-07 58.9 93 30.1
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 1.1e-06 58.5 91 34.1
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.1e-06 58.5 90 34.4
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-06 58.5 91 34.1
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.1e-06 58.5 141 28.4
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 1.5e-06 58.2 83 36.1
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-06 58.2 141 27.0
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-06 58.2 94 31.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-06 58.2 141 27.0
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-06 58.2 141 27.0
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-06 57.8 94 30.9
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 1.9e-06 57.8 250 25.6
RcHm_v2.0_Chr4g0421591 Rosa chinensis HOM05D001313 ORTHO05D001590 1.9e-06 57.8 112 27.7
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 4.3e-06 56.6 91 34.1
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.6e-06 56.2 94 31.9
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.4e-06 55.8 100 30.0


User provided reference genes

Program Settings