Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 2.2e-47 191.8 87 100.0
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 4.0e-25 117.9 62 88.7
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 7.5e-24 113.6 62 83.9
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 9.9e-24 113.2 70 77.1
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 1.3e-23 112.8 63 82.5
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 1.7e-23 112.5 61 85.2
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 1.7e-23 112.5 62 82.3
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 2.9e-23 111.7 61 83.6
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.9e-23 111.7 70 75.7
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 4.9e-23 110.9 61 82.0
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 4.9e-23 110.9 61 83.6
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 4.9e-23 110.9 61 82.0
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 6.4e-23 110.5 62 79.0
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 6.4e-23 110.5 61 82.0
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 6.4e-23 110.5 61 82.0
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 8.3e-23 110.2 61 80.3
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.1e-22 109.8 61 83.6
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 1.4e-22 109.4 62 79.0
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 1.9e-22 109.0 61 83.6
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 1.9e-22 109.0 61 80.3
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 2.4e-22 108.6 61 78.7
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 2.4e-22 108.6 62 79.0
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 3.2e-22 108.2 62 77.4
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 3.2e-22 108.2 61 80.3
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 3.2e-22 108.2 62 79.0
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 4.1e-22 107.8 61 82.0
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 5.4e-22 107.5 71 73.2
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 5.4e-22 107.5 61 82.0
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 5.4e-22 107.5 70 71.4
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 7.1e-22 107.1 70 68.6
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 7.1e-22 107.1 61 77.0
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 9.2e-22 106.7 61 78.7
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 9.2e-22 106.7 63 77.8
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 9.2e-22 106.7 63 77.8
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 9.2e-22 106.7 62 75.8
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 9.2e-22 106.7 61 78.7
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 9.2e-22 106.7 61 78.7
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 1.2e-21 106.3 61 78.7
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.2e-21 106.3 61 77.0
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.2e-21 106.3 62 79.0
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 1.6e-21 105.9 62 75.8
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.6e-21 105.9 62 75.8
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.6e-21 105.9 62 75.8
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 1.6e-21 105.9 62 75.8
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 2.1e-21 105.5 62 74.2
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 2.1e-21 105.5 61 80.3
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 2.1e-21 105.5 61 77.0
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 2.7e-21 105.1 61 75.4
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 2.7e-21 105.1 71 71.8
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 2.7e-21 105.1 61 78.7
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 2.7e-21 105.1 61 80.3
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 3.5e-21 104.8 71 70.4
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 3.5e-21 104.8 61 75.4
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 3.5e-21 104.8 61 75.4
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 4.6e-21 104.4 61 80.3
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 4.6e-21 104.4 61 75.4
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.6e-21 104.4 62 74.2
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 4.6e-21 104.4 61 75.4
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 6.0e-21 104.0 61 73.8
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 7.8e-21 103.6 71 70.4
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 7.8e-21 103.6 61 73.8
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 7.8e-21 103.6 61 75.4
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 1.0e-20 103.2 61 75.4
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 1.3e-20 102.8 71 69.0
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.3e-20 102.8 61 73.8
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 1.3e-20 102.8 71 69.0
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.7e-20 102.4 61 73.8
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.7e-20 102.4 61 72.1
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 3.0e-20 101.7 61 73.8
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 5.1e-20 100.9 61 75.4
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 6.6e-20 100.5 61 75.4
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 6.6e-20 100.5 61 75.4
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 6.6e-20 100.5 61 75.4
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 8.6e-20 100.1 61 73.8
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 1.5e-19 99.4 61 72.1
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.9e-19 99.0 61 72.1
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 2.5e-19 98.6 66 68.2
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 2.5e-19 98.6 61 70.5
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 4.3e-19 97.8 61 70.5
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 4.3e-19 97.8 61 72.1
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 5.6e-19 97.4 62 69.4
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 5.6e-19 97.4 62 66.1
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 5.6e-19 97.4 62 66.1
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.3e-15 86.3 61 57.4
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 1.3e-15 86.3 67 50.7
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 3.2e-14 81.6 61 54.1
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 1.4e-09 66.2 37 75.7
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 1.4e-09 66.2 60 45.0
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.4e-09 65.5 60 45.0
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 6.4e-07 57.4 62 37.1
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.1e-06 56.6 62 37.1


User provided reference genes

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