Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 9.6e-107 390.2 199 100.0
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 2.1e-90 335.9 207 86.5
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 3.1e-41 172.6 231 49.8
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 1.6e-32 143.7 231 41.6
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 2.0e-32 143.3 145 52.4
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 4.5e-32 142.1 236 43.2
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 5.9e-32 141.7 224 44.6
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 1.0e-31 141.0 219 42.9
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 2.2e-31 139.8 213 41.8
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.2e-31 139.8 238 41.6
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.2e-31 139.8 237 40.1
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 1.1e-30 137.5 239 41.8
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 3.2e-30 136.0 121 56.2
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.2e-30 135.6 121 55.4
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 4.2e-30 135.6 121 55.4
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 4.2e-30 135.6 230 42.2
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 1.6e-29 133.7 203 43.3
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 2.1e-29 133.3 214 39.7
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 6.1e-29 131.7 235 39.6
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 1.4e-28 130.6 241 38.6
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 3.0e-28 129.4 121 52.9
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 3.0e-28 129.4 236 37.7
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 5.2e-28 128.6 125 52.8
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 8.8e-28 127.9 218 40.8
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 8.8e-28 127.9 219 40.6
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 1.2e-27 127.5 230 38.3
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 2.6e-27 126.3 232 37.9
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 2.6e-27 126.3 160 50.0
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.6e-27 126.3 231 39.8
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 3.4e-27 125.9 205 42.0
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 4.4e-27 125.6 110 59.1
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 9.8e-27 124.4 234 40.2
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 1.3e-26 124.0 231 37.7
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.8e-26 122.9 228 39.0
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 3.7e-26 122.5 209 36.8
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 3.7e-26 122.5 191 42.9
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 4.9e-26 122.1 124 50.8
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 8.3e-26 121.3 195 38.5
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.8e-25 120.2 200 38.0
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 1.8e-25 120.2 128 52.3
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 2.4e-25 119.8 211 37.0
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.4e-25 119.8 235 35.3
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.4e-25 119.8 233 36.1
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.4e-25 119.8 235 35.7
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 2.4e-25 119.8 208 41.3
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 3.1e-25 119.4 209 37.8
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 3.1e-25 119.4 220 39.5
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 4.1e-25 119.0 235 37.0
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 4.1e-25 119.0 212 40.6
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 4.1e-25 119.0 124 53.2
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 1.2e-24 117.5 249 38.6
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 1.6e-24 117.1 235 35.3
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.6e-24 117.1 235 35.3
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 1.6e-24 117.1 218 39.0
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 2.0e-24 116.7 220 41.4
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 2.7e-24 116.3 153 43.1
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 3.5e-24 115.9 221 38.5
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 3.5e-24 115.9 128 50.8
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 7.8e-24 114.8 231 36.4
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.7e-23 113.6 229 38.0
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 1.7e-23 113.6 221 40.3
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 2.3e-23 113.2 232 37.1
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.9e-23 112.8 231 37.2
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 3.8e-23 112.5 216 38.0
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 3.8e-23 112.5 214 39.7
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 3.8e-23 112.5 119 52.1
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 5.0e-23 112.1 217 37.8
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 1.9e-22 110.2 185 39.5
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 3.3e-22 109.4 211 38.4
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 5.6e-22 108.6 211 35.5
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 7.3e-22 108.2 224 36.6
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 9.5e-22 107.8 211 35.1
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 9.5e-22 107.8 211 38.9
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 9.5e-22 107.8 210 37.1
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.6e-21 107.1 201 37.3
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 2.1e-21 106.7 130 48.5
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 2.1e-21 106.7 212 38.7
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 8.0e-21 104.8 234 38.0
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 1.4e-20 104.0 222 36.5
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 1.8e-20 103.6 124 49.2
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 1.8e-20 103.6 222 37.4
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 4.0e-20 102.4 118 50.0
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 5.2e-20 102.1 213 36.6
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 5.2e-20 102.1 100 56.0
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 5.2e-20 102.1 100 56.0
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 5.2e-20 102.1 209 35.9
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 8.9e-20 101.3 123 44.7
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 8.9e-20 101.3 132 49.2
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 8.9e-20 101.3 136 41.2
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 8.9e-20 101.3 168 39.9
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 1.2e-19 100.9 222 36.9
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 1.5e-19 100.5 217 35.9
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 2.6e-19 99.8 152 39.5
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 2.6e-19 99.8 210 34.3
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 2.6e-19 99.8 96 52.1
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 2.6e-19 99.8 136 41.2
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 3.4e-19 99.4 215 34.4
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 4.4e-19 99.0 223 35.4
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 7.5e-19 98.2 104 49.0
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 7.5e-19 98.2 136 40.4
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 7.5e-19 98.2 220 35.0
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 3.7e-18 95.9 119 48.7
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 3.7e-18 95.9 119 48.7
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 6.4e-18 95.1 133 43.6
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 6.4e-18 95.1 133 43.6
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 7.0e-17 91.7 119 47.1
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 1.6e-16 90.5 124 39.5
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 2.0e-16 90.1 121 44.6
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 2.7e-16 89.7 241 35.7
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 4.6e-16 89.0 114 47.4
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 1.0e-15 87.8 167 37.1
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 2.3e-15 86.7 209 32.5
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 5.0e-15 85.5 205 32.7
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 1.1e-14 84.3 169 37.3
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 4.3e-14 82.4 201 33.3
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 1.6e-13 80.5 197 35.5
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 1.4e-12 77.4 92 46.7
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 1.4e-12 77.4 99 43.4
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 1.8e-12 77.0 121 34.7
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 2.3e-12 76.6 111 41.4
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 3.1e-12 76.3 119 41.2
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 8.9e-12 74.7 102 37.3
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 1.5e-11 73.9 63 54.0
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 2.0e-11 73.6 107 40.2
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.4e-11 72.8 185 33.0
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 5.8e-11 72.0 91 49.5
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 7.5e-11 71.6 116 32.8
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 1.4e-09 67.4 57 57.9
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 5.4e-09 65.5 61 55.7
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 2.7e-08 63.2 143 30.8
BcaB06g26464 Brassica carinata HOM05D001447 ORTHO05D005923 8.6e-07 58.2 140 37.1


User provided reference genes

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