Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A773T44 Lonicera japonica HOM05D046481 ORTHO05D018013 4.8e-67 257.7 128 100.0
Lj5A806T26 Lonicera japonica HOM05D046481 ORTHO05D018013 5.9e-33 144.4 76 97.4
Lj4A323T38 Lonicera japonica HOM05D000092 ORTHO05D000042 2.3e-29 132.5 125 56.0
Lj5A772G60 Lonicera japonica HOM05D000092 ORTHO05D000042 1.7e-27 126.3 124 54.8
Lj5C778T2 Lonicera japonica HOM05D000092 ORTHO05D000042 3.7e-27 125.2 127 52.8
Lj5A774G52 Lonicera japonica HOM05D000092 ORTHO05D000042 1.1e-26 123.6 124 54.0
Lj5C775T1 Lonicera japonica HOM05D000092 ORTHO05D000042 2.6e-25 119.0 126 51.6
Lj4C322T4 Lonicera japonica HOM05D000092 ORTHO05D000042 7.7e-25 117.5 112 56.2
Lj5C545T1 Lonicera japonica HOM05D000092 ORTHO05D000042 7.2e-23 110.9 121 51.2
Lj5C780T0 Lonicera japonica HOM05D000092 ORTHO05D000042 2.7e-22 109.0 123 51.2
Lj5C803T8 Lonicera japonica HOM05D000092 ORTHO05D000042 4.7e-22 108.2 124 49.2
Lj4C326T4 Lonicera japonica HOM05D000092 ORTHO05D000042 1.0e-21 107.1 107 54.2
Lju124A44G40 Lonicera japonica HOM05D000092 ORTHO05D000042 1.5e-20 103.2 145 42.8
Lj5P706T49 Lonicera japonica HOM05D000092 ORTHO05D018013 3.3e-20 102.1 94 53.2
Lj5P699T6 Lonicera japonica HOM05D000092 ORTHO05D018013 7.4e-20 100.9 95 54.7
Lj5P806T5 Lonicera japonica HOM05D000092 ORTHO05D018013 7.4e-20 100.9 93 55.9
Lj5P807T16 Lonicera japonica HOM05D000092 ORTHO05D018013 2.2e-19 99.4 94 51.1
Lj3C14T0 Lonicera japonica HOM05D000092 ORTHO05D000042 3.7e-19 98.6 115 45.2
Lj5C779T0 Lonicera japonica HOM05D000092 ORTHO05D000042 7.0e-18 94.4 124 45.2
Oeu059341.1 Olea europaea HOM05D000092 ORTHO05D000042 2.5e-15 85.9 149 38.9
Lju124C44T15 Lonicera japonica HOM05D000092 ORTHO05D000042 7.2e-15 84.3 133 38.3
Lj1C1131T0 Lonicera japonica HOM05D000092 ORTHO05D000042 8.0e-14 80.9 151 35.8
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 5.2e-13 78.2 80 47.5
Lju124C46T9 Lonicera japonica HOM05D000092 ORTHO05D000042 5.2e-13 78.2 151 33.8
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 6.8e-13 77.8 80 46.2
Dinv24998 Davidia involucrata HOM05D000092 ORTHO05D016246 6.8e-13 77.8 80 43.8
Dinv25005 Davidia involucrata HOM05D000092 ORTHO05D000042 6.8e-13 77.8 80 43.8
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 6.8e-13 77.8 105 37.1
Dinv25008 Davidia involucrata HOM05D000092 ORTHO05D000042 8.8e-13 77.4 80 42.5
Lj1A1130G57 Lonicera japonica HOM05D000092 ORTHO05D000042 1.5e-12 76.6 90 45.6
QL07p010720 Quercus lobata HOM05D000092 ORTHO05D000042 2.6e-12 75.9 79 45.6
QL07p010547 Quercus lobata HOM05D000092 ORTHO05D000042 3.4e-12 75.5 79 45.6
Lj3C13G13 Lonicera japonica HOM05D000092 ORTHO05D000042 4.4e-12 75.1 80 48.8
QL07p010572 Quercus lobata HOM05D000092 ORTHO05D000042 7.5e-12 74.3 79 44.3
Lju124A47T120 Lonicera japonica HOM05D000092 ORTHO05D000042 1.7e-11 73.2 142 33.8
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 2.2e-11 72.8 77 42.9
QL07p010874 Quercus lobata HOM05D000092 ORTHO05D000042 2.8e-11 72.4 81 46.9
Dinv20774 Davidia involucrata HOM05D000092 ORTHO05D000042 6.3e-11 71.2 113 35.4
Oeu054048.1 Olea europaea HOM05D000092 ORTHO05D000042 1.1e-10 70.5 81 45.7
Cc00_g22090 Coffea canephora HOM05D000092 ORTHO05D000042 1.8e-10 69.7 105 41.0
Oeu027648.2 Olea europaea HOM05D000092 ORTHO05D000042 1.8e-10 69.7 120 33.3
Oeu041352.1 Olea europaea HOM05D000092 ORTHO05D000042 1.8e-10 69.7 81 43.2
QL07p019286 Quercus lobata HOM05D000092 ORTHO05D000042 1.8e-10 69.7 81 42.0
Cc00_g13150 Coffea canephora HOM05D000092 ORTHO05D000042 2.4e-10 69.3 106 39.6
Lj6C157T5 Lonicera japonica HOM05D000092 ORTHO05D000042 2.4e-10 69.3 116 30.2
QL07p010511 Quercus lobata HOM05D000092 ORTHO05D000042 3.1e-10 68.9 78 46.2
Lj5C773G9 Lonicera japonica HOM05D000092 ORTHO05D000042 4.1e-10 68.6 76 48.7
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-10 68.2 77 40.3
Lj6C154G2 Lonicera japonica HOM05D000092 ORTHO05D000042 5.4e-10 68.2 116 29.3
Oeu009026.1 Olea europaea HOM05D000092 ORTHO05D000042 7.0e-10 67.8 118 38.1
CiPaw.16G012100 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.2e-09 67.0 77 42.9
CiPaw.16G011600 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.6e-09 66.6 77 41.6
Cc06_g19740 Coffea canephora HOM05D000092 ORTHO05D000042 1.6e-09 66.6 106 37.7
CiPaw.16G011800 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.0e-09 66.2 132 30.3
CiPaw.14G090800 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.7e-09 65.9 120 32.5
CiPaw.16G069800 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.7e-09 65.9 76 40.8
Lj2A406G37 Lonicera japonica HOM05D000092 ORTHO05D000042 2.7e-09 65.9 107 34.6
Medtr7g088290 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-09 65.9 78 41.0
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.7e-09 65.9 103 35.0
TPR.G39851 Trifolium pratense HOM05D000092 ORTHO05D000042 2.7e-09 65.9 78 37.2
Cc06_g19720 Coffea canephora HOM05D000092 ORTHO05D000042 3.5e-09 65.5 105 40.0
Dinv20558 Davidia involucrata HOM05D000092 ORTHO05D000042 3.5e-09 65.5 77 37.7
Dinv20738 Davidia involucrata HOM05D000092 ORTHO05D000042 3.5e-09 65.5 77 37.7
Manes.07G062388 Manihot esculenta HOM05D000092 ORTHO05D000042 3.5e-09 65.5 105 32.4
CSS0004521 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.5e-09 65.1 90 37.8
Lj5C541T0 Lonicera japonica HOM05D000092 ORTHO05D000042 4.5e-09 65.1 103 41.7
PGR031G3667 Punica granatum HOM05D000092 ORTHO05D000042 4.5e-09 65.1 145 31.0
QL03p001996 Quercus lobata HOM05D000092 ORTHO05D000042 4.5e-09 65.1 144 25.7
CSS0018500 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.9e-09 64.7 139 30.2
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 5.9e-09 64.7 147 27.9
Oeu038338.1 Olea europaea HOM05D000092 ORTHO05D000042 7.7e-09 64.3 150 34.7
TPR.G25280 Trifolium pratense HOM05D000092 ORTHO05D000042 7.7e-09 64.3 107 39.3
CiPaw.14G091000 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.0e-08 63.9 120 32.5
Oeu009134.1 Olea europaea HOM05D000092 ORTHO05D000042 1.0e-08 63.9 145 33.8
PGR031G2916 Punica granatum HOM05D000092 ORTHO05D000042 1.0e-08 63.9 146 31.5
QL03p001366 Quercus lobata HOM05D000092 ORTHO05D000042 1.0e-08 63.9 143 29.4
Lju124A47T119 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-08 63.5 89 41.6
Medtr5g036460 Medicago truncatula HOM05D000092 ORTHO05D000042 1.3e-08 63.5 139 28.1
QL07p010603 Quercus lobata HOM05D000092 ORTHO05D000042 1.3e-08 63.5 77 41.6
CSS0004934 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.7e-08 63.2 90 36.7
CiPaw.16G056500 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.7e-08 63.2 147 27.9
Lj5C707G1 Lonicera japonica HOM05D000092 ORTHO05D000042 1.7e-08 63.2 76 46.1
Oeu009028.3 Olea europaea HOM05D000092 ORTHO05D000042 1.7e-08 63.2 118 35.6
Actinidia38180 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.9e-08 62.4 81 43.2
Cc00_g13170 Coffea canephora HOM05D000092 ORTHO05D000042 2.9e-08 62.4 135 36.3
Phvul.004G048000 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 2.9e-08 62.4 120 30.8
QL03p001664 Quercus lobata HOM05D000092 ORTHO05D000042 2.9e-08 62.4 143 28.0
QL07p010927 Quercus lobata HOM05D000092 ORTHO05D000042 2.9e-08 62.4 80 41.2
QL07p019170 Quercus lobata HOM05D000254 ORTHO05D000165 2.9e-08 62.4 80 40.0
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 3.8e-08 62.0 112 38.4
Lj6C158G2 Lonicera japonica HOM05D000092 ORTHO05D000042 3.8e-08 62.0 107 29.0
CiPaw.14G091300 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.0e-08 61.6 120 30.8
TPR.G16791 Trifolium pratense HOM05D000092 ORTHO05D000042 5.0e-08 61.6 113 39.8
arahy.Tifrunner.gnm1.ann1.NH27IJ Arachis hypogaea HOM05D000092 ORTHO05D000042 6.5e-08 61.2 79 35.4
arahy.Tifrunner.gnm1.ann1.WZ0QPG Arachis hypogaea HOM05D000092 ORTHO05D000042 6.5e-08 61.2 79 35.4
CSS0000646 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.5e-08 61.2 94 36.2
CSS0045676 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.5e-08 61.2 90 37.8
Cc06_g19650 Coffea canephora HOM05D000092 ORTHO05D000042 6.5e-08 61.2 135 36.3
COL.COLO4_13570 Corchorus olitorius HOM05D000092 ORTHO05D000042 6.5e-08 61.2 160 25.6
Dinv05367 Davidia involucrata HOM05D013973 ORTHO05D013263 6.5e-08 61.2 74 41.9
Lj1g0003658 Lotus japonicus HOM05D000092 ORTHO05D000042 6.5e-08 61.2 77 39.0
CSS0042157 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 8.5e-08 60.8 90 37.8
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 8.5e-08 60.8 105 29.5
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 8.5e-08 60.8 105 29.5
PGR031G1624 Punica granatum HOM05D000092 ORTHO05D000042 8.5e-08 60.8 81 37.0
Manes.07G062324 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-07 60.5 105 27.6
QL07p019306 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-07 60.5 80 38.8
Thecc.05G203000 Theobroma cacao HOM05D000092 ORTHO05D000042 1.1e-07 60.5 144 27.8
Actinidia38188 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.5e-07 60.1 149 30.2
Lj5C706G1 Lonicera japonica HOM05D000092 ORTHO05D000042 1.5e-07 60.1 87 42.5
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.5e-07 60.1 103 34.0
TPR.G13805 Trifolium pratense HOM05D000092 ORTHO05D000042 1.5e-07 60.1 109 36.7
CSS0030405 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.9e-07 59.7 90 37.8
CiPaw.16G058100 Carya illinoinensis HOM05D000368 ORTHO05D000289 1.9e-07 59.7 123 34.1
Duzib192G0564 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-07 59.7 152 25.7
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-07 59.7 143 27.3
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 1.9e-07 59.7 105 28.6
CSS0020255 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.5e-07 59.3 90 37.8
Lj1A1097G36 Lonicera japonica HOM05D000092 ORTHO05D000042 2.5e-07 59.3 89 37.1
Lj1C1095G2 Lonicera japonica HOM05D000092 ORTHO05D000042 2.5e-07 59.3 89 37.1
TPR.G25268 Trifolium pratense HOM05D000092 ORTHO05D000042 2.5e-07 59.3 107 37.4
CSS0043587 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.2e-07 58.9 90 36.7
Dinv05438 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-07 58.9 77 44.2
Actinidia38183 Actinidia chinensis HOM05D000092 ORTHO05D000042 4.2e-07 58.5 81 35.8
CSS0003439 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.2e-07 58.5 90 37.8
GSVIVG01030726001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.2e-07 58.5 80 41.2
Duzib177G0387 Durio zibethinus HOM05D000092 ORTHO05D000042 5.5e-07 58.2 152 24.3
Lj6A179T31 Lonicera japonica HOM05D000092 ORTHO05D000042 5.5e-07 58.2 127 32.3
QL03p001771 Quercus lobata HOM05D000092 ORTHO05D000042 5.5e-07 58.2 141 29.1
QL10p064757 Quercus lobata HOM05D000092 ORTHO05D000042 5.5e-07 58.2 143 24.5
Thecc.05G318100 Theobroma cacao HOM05D000467 ORTHO05D000379 5.5e-07 58.2 143 26.6
TPR.G13790 Trifolium pratense HOM05D000092 ORTHO05D000042 5.5e-07 58.2 113 35.4
TPR.G40261 Trifolium pratense HOM05D000092 ORTHO05D000042 5.5e-07 58.2 107 36.4
CSS0021620 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 7.2e-07 57.8 90 35.6
Lj1P1085T29 Lonicera japonica HOM05D000092 ORTHO05D000042 7.2e-07 57.8 80 31.2
QL07p010649 Quercus lobata HOM05D000092 ORTHO05D000042 9.4e-07 57.4 80 38.8
VMungo0464G1511 Vigna mungo HOM05D000092 ORTHO05D000042 9.4e-07 57.4 77 33.8
arahy.Tifrunner.gnm1.ann1.C6R2SB Arachis hypogaea HOM05D000092 ORTHO05D000042 1.2e-06 57.0 77 31.2
Haze_04283 Corylus avellana HOM05D000092 ORTHO05D000042 1.2e-06 57.0 126 30.2
Duzib177G0159 Durio zibethinus HOM05D000092 ORTHO05D000042 1.2e-06 57.0 152 24.3
Eucgr.G00361 Eucalyptus grandis HOM05D000092 ORTHO05D000042 1.2e-06 57.0 109 32.1
Sabra13G0015000 Salix brachista HOM05D000092 ORTHO05D000042 1.2e-06 57.0 76 34.2
Sabra13G0019200 Salix brachista HOM05D000092 ORTHO05D000042 1.2e-06 57.0 76 34.2
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 1.2e-06 57.0 76 35.5
Dinv12835 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-06 56.6 118 29.7
Manes.11G052160 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-06 56.6 107 28.0
Medtr2g089975 Medicago truncatula HOM05D000092 ORTHO05D000042 1.6e-06 56.6 107 37.4
Sabra13G0013900 Salix brachista HOM05D000092 ORTHO05D000042 1.6e-06 56.6 148 26.4
TPR.G23698 Trifolium pratense HOM05D000092 ORTHO05D037790 1.6e-06 56.6 79 35.4
GSVIVG01036191001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.6e-06 56.6 78 39.7
Lj5P808T8 Lonicera japonica HOM05D000092 ORTHO05D018013 2.1e-06 56.2 67 52.2
PGR031G0923 Punica granatum HOM05D000092 ORTHO05D000042 2.1e-06 56.2 81 33.3
Sabra13G0018100 Salix brachista HOM05D000092 ORTHO05D000042 2.1e-06 56.2 139 28.8
CiPaw.16G058500 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.7e-06 55.8 79 43.0
CiPaw.16G058800 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.7e-06 55.8 79 43.0
Dinv07579 Davidia involucrata HOM05D000092 ORTHO05D000042 2.7e-06 55.8 153 28.8
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-06 55.8 105 28.6
Manes.11G052130 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-06 55.8 107 28.0
Medtr1g036750 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 55.8 107 34.6
PGR031G2517 Punica granatum HOM05D000092 ORTHO05D000042 2.7e-06 55.8 78 34.6
PGR035G0003 Punica granatum HOM05D000092 ORTHO05D000042 2.7e-06 55.8 78 34.6
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 2.7e-06 55.8 76 39.5
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 2.7e-06 55.8 150 26.0
TPR.G13803 Trifolium pratense HOM05D000092 ORTHO05D000042 2.7e-06 55.8 92 35.9
GSVIVG01023566001 Vitis vinifera HOM05D000092 ORTHO05D000042 2.7e-06 55.8 139 30.9
Actinidia38186 Actinidia chinensis HOM05D000092 ORTHO05D000042 3.6e-06 55.5 81 37.0
arahy.Tifrunner.gnm1.ann1.IV9S0P Arachis hypogaea HOM05D000092 ORTHO05D000042 3.6e-06 55.5 77 32.5
CiPaw.16G058600 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.6e-06 55.5 122 33.6
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 3.6e-06 55.5 153 26.1
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.6e-06 55.5 140 27.9
Rhsim07G0168300 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.6e-06 55.5 150 30.0
Thecc.05G297300 Theobroma cacao HOM05D000092 ORTHO05D000042 3.6e-06 55.5 150 27.3
Cfa019908 Carpinus fangiana HOM05D000092 ORTHO05D000042 4.7e-06 55.1 125 30.4
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 4.7e-06 55.1 145 25.5
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 4.7e-06 55.1 145 25.5
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 4.7e-06 55.1 105 27.6
Prupe.3G141500 Prunus persica HOM05D000092 ORTHO05D000042 4.7e-06 55.1 82 35.4
QL03p002457 Quercus lobata HOM05D000092 ORTHO05D000042 4.7e-06 55.1 142 25.4
Lj3P572T22 Lonicera japonica HOM05D000092 ORTHO05D000042 6.1e-06 54.7 26 92.3
Prupe.7G037500 Prunus persica HOM05D000092 ORTHO05D000042 6.1e-06 54.7 79 38.0
PGR031G3137 Punica granatum HOM05D000092 ORTHO05D000042 6.1e-06 54.7 81 33.3
Cfa006505 Carpinus fangiana HOM05D000092 ORTHO05D000042 8.0e-06 54.3 123 30.1
CiPaw.16G058200 Carya illinoinensis HOM05D000092 ORTHO05D000042 8.0e-06 54.3 80 40.0
Dinv07585 Davidia involucrata HOM05D000092 ORTHO05D000042 8.0e-06 54.3 151 26.5
Gohir.D11G325900 Gossypium hirsutum HOM05D000092 ORTHO05D000042 8.0e-06 54.3 138 26.1
PGR031G0188 Punica granatum HOM05D000092 ORTHO05D000042 8.0e-06 54.3 152 27.0
Sabra13G0019500 Salix brachista HOM05D000092 ORTHO05D000042 8.0e-06 54.3 76 32.9
TPR.G29461 Trifolium pratense HOM05D000092 ORTHO05D000042 8.0e-06 54.3 78 32.1
GSVIVG01023548001 Vitis vinifera HOM05D000092 ORTHO05D000042 8.0e-06 54.3 139 28.1


User provided reference genes

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