Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A765G46 Lonicera japonica HOM05D000163 ORTHO05D000219 2.8e-35 151.4 74 100.0
GSVIVG01032261001 Vitis vinifera HOM05D000163 ORTHO05D000219 1.3e-08 62.8 47 59.6
Duzib168G0858 Durio zibethinus HOM05D000163 ORTHO05D000219 1.1e-07 59.7 43 60.5
Gohir.D04G085300 Gossypium hirsutum HOM05D000163 ORTHO05D000219 1.1e-07 59.7 44 63.6
Gorai.012G095300 Gossypium raimondii HOM05D000163 ORTHO05D000219 1.1e-07 59.7 44 63.6
Thecc.09G196300 Theobroma cacao HOM05D000163 ORTHO05D000219 1.9e-07 58.9 51 51.0
Nn8g41126 Nelumbo nucifera HOM05D000163 ORTHO05D000219 2.5e-07 58.5 47 57.4
Gohir.A05G001000 Gossypium hirsutum HOM05D000163 ORTHO05D000219 3.2e-07 58.2 43 58.1
TAR625G0541 Trochodendron aralioides HOM05D000163 ORTHO05D000219 3.2e-07 58.2 43 62.8
Hund03229 Selenicereus undatus HOM05D000163 ORTHO05D000219 4.2e-07 57.8 43 62.8
Gohir.A05G345836 Gossypium hirsutum HOM05D000163 ORTHO05D000219 5.5e-07 57.4 44 61.4
Lalb_Chr24g0392701 Lupinus albus HOM05D000163 ORTHO05D000219 5.5e-07 57.4 39 69.2
MBI16_g00845_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D000219 5.5e-07 57.4 49 61.2
PSO017G0773 Papaver somniferum HOM05D000163 ORTHO05D000219 5.5e-07 57.4 42 64.3
Nn5g27067 Nelumbo nucifera HOM05D000163 ORTHO05D000219 7.1e-07 57.0 46 56.5
Ah.08g217900 Amaranthus hybridus HOM05D000163 ORTHO05D000219 9.3e-07 56.6 40 65.0
EL10Ac7g18123 Beta vulgaris HOM05D000163 ORTHO05D000219 9.3e-07 56.6 45 55.6
Dinv12611 Davidia involucrata HOM05D000163 ORTHO05D000219 9.3e-07 56.6 44 61.4
PSO170G4854 Papaver somniferum HOM05D000163 ORTHO05D000219 9.3e-07 56.6 42 61.9
EL10Ac2g03623 Beta vulgaris HOM05D000163 ORTHO05D000219 1.2e-06 56.2 41 61.0
CDE05G2871 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 1.2e-06 56.2 43 60.5
PGR142G0696 Punica granatum HOM05D000163 ORTHO05D000219 1.2e-06 56.2 40 60.0
Dinv12610 Davidia involucrata HOM05D000163 ORTHO05D000219 1.6e-06 55.8 42 61.9
TWI34G1975 Tripterygium wilfordii HOM05D000163 ORTHO05D000219 1.6e-06 55.8 39 64.1
Ciclev10010281m.g Citrus clementina HOM05D000163 ORTHO05D000219 2.1e-06 55.5 43 58.1
FvH4_1g27800 Fragaria vesca HOM05D000163 ORTHO05D000219 2.1e-06 55.5 43 58.1
Gorai.009G001200 Gossypium raimondii HOM05D000163 ORTHO05D000219 2.1e-06 55.5 36 63.9
CSS0016611 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000219 2.7e-06 55.1 54 55.6
CANSAT80G2232 Cannabis sativa HOM05D000163 ORTHO05D000219 2.7e-06 55.1 42 54.8
Manes.03G000800 Manihot esculenta HOM05D000163 ORTHO05D000219 2.7e-06 55.1 48 60.4
Actinidia07568 Actinidia chinensis HOM05D000163 ORTHO05D000219 3.5e-06 54.7 36 66.7
CSS0007823 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000219 3.5e-06 54.7 34 70.6
RcHm_v2.0_Chr2g0134781 Rosa chinensis HOM05D000163 ORTHO05D000219 3.5e-06 54.7 43 53.5
CSS0041238 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000219 4.6e-06 54.3 34 67.6
SHI03130 Sapria himalayana HOM05D000163 ORTHO05D000219 4.6e-06 54.3 54 53.7
Aa31LG8G7010 Aethionema arabicum HOM05D000163 ORTHO05D000219 6.0e-06 53.9 39 66.7
EL10Ac2g03621 Beta vulgaris HOM05D000163 ORTHO05D000219 6.0e-06 53.9 34 73.5
PGR044G2201 Punica granatum HOM05D000163 ORTHO05D000219 6.0e-06 53.9 53 52.8
TAR383G0446 Trochodendron aralioides HOM05D000163 ORTHO05D000219 6.0e-06 53.9 39 66.7
MSTRG.11816 Avicennia marina HOM05D000163 ORTHO05D000219 7.9e-06 53.5 34 67.6
Sp7g07060 Schrenkiella parvula HOM05D000163 ORTHO05D000219 7.9e-06 53.5 46 54.3


User provided reference genes

Program Settings