Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 2.0e-68 262.3 130 100.0
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 6.6e-40 167.5 128 73.4
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 1.9e-39 166.0 128 72.7
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 7.3e-39 164.1 128 71.1
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 9.5e-39 163.7 131 69.5
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.6e-38 162.9 128 71.1
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 2.1e-38 162.5 128 70.3
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 1.1e-37 160.2 128 70.3
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.4e-37 159.8 128 68.8
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-37 159.8 116 73.3
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-37 159.8 116 73.3
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.8e-37 159.5 116 73.3
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 3.1e-37 158.7 128 69.5
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 3.1e-37 158.7 128 68.8
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 4.0e-37 158.3 128 68.0
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 4.0e-37 158.3 128 68.8
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 6.8e-37 157.5 107 77.6
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.8e-37 157.5 128 68.8
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 8.9e-37 157.1 107 77.6
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 8.9e-37 157.1 107 74.8
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 1.2e-36 156.8 127 69.3
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 1.2e-36 156.8 107 74.8
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 1.2e-36 156.8 128 70.3
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 1.5e-36 156.4 128 68.0
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 1.5e-36 156.4 113 73.5
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 2.0e-36 156.0 127 68.5
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 2.6e-36 155.6 128 68.8
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 2.6e-36 155.6 106 73.6
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 2.6e-36 155.6 106 73.6
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 4.4e-36 154.8 127 69.3
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 5.8e-36 154.5 127 67.7
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 5.8e-36 154.5 127 67.7
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 5.8e-36 154.5 106 73.6
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 5.8e-36 154.5 127 66.9
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 7.5e-36 154.1 128 68.0
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 7.5e-36 154.1 128 68.0
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 7.5e-36 154.1 128 68.0
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 9.8e-36 153.7 128 67.2
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 9.8e-36 153.7 127 66.9
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 9.8e-36 153.7 107 77.6
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.3e-35 153.3 128 66.4
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 1.7e-35 152.9 127 66.9
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 1.7e-35 152.9 127 67.7
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 1.7e-35 152.9 127 66.9
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 2.9e-35 152.1 128 65.6
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 3.7e-35 151.8 116 69.8
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 4.9e-35 151.4 106 72.6
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 6.4e-35 151.0 128 65.6
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 6.4e-35 151.0 128 64.1
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 6.4e-35 151.0 127 66.9
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 8.3e-35 150.6 127 65.4
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 1.1e-34 150.2 128 64.8
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 1.1e-34 150.2 128 64.1
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 1.1e-34 150.2 128 66.4
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 1.1e-34 150.2 112 70.5
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.4e-34 149.8 107 71.0
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.4e-34 149.8 127 64.6
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.4e-34 149.8 115 67.0
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 1.9e-34 149.4 128 64.1
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 1.9e-34 149.4 125 65.6
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 2.4e-34 149.1 107 72.0
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 2.4e-34 149.1 107 72.9
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 4.1e-34 148.3 128 64.8
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 5.4e-34 147.9 128 63.3
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 7.0e-34 147.5 128 64.1
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 7.0e-34 147.5 128 64.1
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 9.2e-34 147.1 116 66.4
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 1.2e-33 146.7 128 62.5
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 1.2e-33 146.7 128 62.5
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 1.6e-33 146.4 128 63.3
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 1.6e-33 146.4 116 67.2
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 1.6e-33 146.4 128 62.5
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 1.6e-33 146.4 128 65.6
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 1.6e-33 146.4 128 62.5
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 2.1e-33 146.0 107 71.0
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 2.7e-33 145.6 107 67.3
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 2.7e-33 145.6 128 65.6
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 3.5e-33 145.2 128 61.7
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 3.5e-33 145.2 128 62.5
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 4.6e-33 144.8 126 61.9
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 4.6e-33 144.8 116 68.1
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 4.6e-33 144.8 157 57.3
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 4.6e-33 144.8 128 61.7
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 7.8e-33 144.1 128 63.3
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 7.8e-33 144.1 107 69.2
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.0e-32 143.7 128 60.9
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 2.3e-32 142.5 127 62.2
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 3.9e-32 141.7 129 58.9
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 6.6e-32 141.0 107 67.3
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 6.6e-32 141.0 128 62.5
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 8.6e-32 140.6 128 61.7
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 8.6e-32 140.6 107 69.2
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 8.6e-32 140.6 128 63.3
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.1e-31 140.2 107 68.2
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 1.1e-31 140.2 128 62.5
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 1.5e-31 139.8 107 70.1
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.5e-31 139.8 107 68.2
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 1.9e-31 139.4 107 68.2
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.9e-31 139.4 107 68.2
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 3.3e-31 138.7 126 61.1
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 3.3e-31 138.7 129 59.7
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 7.3e-31 137.5 107 68.2
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 1.6e-30 136.3 106 65.1
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 2.8e-30 135.6 107 67.3
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 2.8e-30 135.6 107 66.4
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 2.8e-30 135.6 107 64.5
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 3.6e-30 135.2 128 60.9
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 4.7e-30 134.8 107 66.4
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 4.7e-30 134.8 126 57.9
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 1.1e-29 133.7 128 59.4
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.4e-29 133.3 128 58.6
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-29 133.3 107 63.6
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.8e-29 132.9 128 57.0
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 3.1e-29 132.1 107 62.6
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 4.0e-29 131.7 128 57.0
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 4.0e-29 131.7 107 64.5
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 4.0e-29 131.7 107 64.5
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 4.0e-29 131.7 128 57.8
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 5.2e-29 131.3 126 58.7
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 8.9e-29 130.6 107 61.7
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 8.9e-29 130.6 107 62.6
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.2e-28 130.2 107 62.6
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.2e-28 130.2 127 57.5
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 1.2e-28 130.2 107 62.6
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.5e-28 129.8 128 57.8
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 1.5e-28 129.8 107 62.6
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 4.4e-28 128.3 128 56.2
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 4.4e-28 128.3 128 55.5
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 1.3e-27 126.7 125 53.6
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.3e-27 126.7 115 61.7
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 1.7e-27 126.3 107 62.6
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 2.2e-27 125.9 107 60.7
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 2.2e-27 125.9 104 59.6
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 2.9e-27 125.6 107 60.7
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 4.9e-27 124.8 128 53.1
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 4.9e-27 124.8 128 53.9
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 4.9e-27 124.8 130 55.4
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 6.4e-27 124.4 128 53.9
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 1.9e-26 122.9 128 60.2
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.9e-26 122.9 101 60.4
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 1.9e-26 122.9 110 59.1
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 1.9e-26 122.9 107 60.7
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 3.2e-26 122.1 88 71.6
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 3.2e-26 122.1 107 59.8
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 3.2e-26 122.1 107 59.8
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 4.1e-26 121.7 126 54.0
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 5.4e-26 121.3 107 58.9
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 7.1e-26 120.9 96 64.6
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 9.2e-26 120.6 114 58.8
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 3.5e-25 118.6 96 63.5
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.0e-24 117.1 96 62.5
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 1.3e-24 116.7 107 57.9
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 1.7e-24 116.3 96 62.5
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 3.0e-24 115.5 96 61.5
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 5.6e-23 111.3 107 55.1
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 2.1e-22 109.4 89 65.2
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 3.1e-21 105.5 87 65.5
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 4.0e-21 105.1 85 69.4
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 6.4e-19 97.8 76 67.1
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 1.6e-17 93.2 76 61.8
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 2.1e-17 92.8 58 82.8
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 1.7e-16 89.7 72 65.3
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 2.3e-16 89.4 76 63.2
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 2.3e-16 89.4 115 42.6
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 2.8e-14 82.4 64 64.1


User provided reference genes

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