Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A672T26 Lonicera japonica HOM05D005029 ORTHO05D006052 5.7e-64 248.1 194 100.0
Dinv41171 Davidia involucrata HOM05D005029 ORTHO05D006052 1.3e-47 193.7 167 65.9
Gohir.A13G208700 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.1e-46 190.7 164 64.6
Peaxi162Scf01600g00016 Petunia axillaris HOM05D005029 ORTHO05D006052 1.1e-46 190.7 169 63.3
Gohir.D13G213100 Gossypium hirsutum HOM05D005029 ORTHO05D006052 1.4e-46 190.3 165 64.2
Gorai.013G243400 Gossypium raimondii HOM05D005029 ORTHO05D006052 1.4e-46 190.3 165 64.2
Nitab4.5_0000617g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 4.1e-46 188.7 168 63.1
Actinidia01279 Actinidia chinensis HOM05D005029 ORTHO05D006052 7.0e-46 188.0 166 63.9
ECA240G3783 Erigeron canadensis HOM05D005029 ORTHO05D006052 7.8e-45 184.5 165 68.5
Eucgr.C00120 Eucalyptus grandis HOM05D005029 ORTHO05D006052 7.8e-45 184.5 169 74.0
Nitab4.5_0008862g0020 Nicotiana tabacum HOM05D005029 ORTHO05D006052 7.8e-45 184.5 166 62.7
COL.COLO4_08419 Corchorus olitorius HOM05D005029 ORTHO05D006052 1.7e-44 183.3 168 61.9
Lsat_1_v5_gn_3_137280 Lactuca sativa HOM05D005029 ORTHO05D006052 2.3e-44 183.0 162 62.3
MSTRG.26542 Avicennia marina HOM05D005029 ORTHO05D006052 6.6e-44 181.4 168 60.7
Duzib170G0048 Durio zibethinus HOM05D005029 ORTHO05D006052 6.6e-44 181.4 168 61.3
Medtr2g037940 Medicago truncatula HOM05D005029 ORTHO05D006052 1.5e-43 180.3 163 62.6
QL02p046501 Quercus lobata HOM05D005029 ORTHO05D006052 1.5e-43 180.3 167 61.7
Haze_22015 Corylus avellana HOM05D005029 ORTHO05D006052 2.5e-43 179.5 168 62.5
HanXRQChr13g0426591 Helianthus annuus HOM05D005029 ORTHO05D006052 2.5e-43 179.5 159 62.3
TWI34G0612 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 2.5e-43 179.5 169 71.0
Cfa013448 Carpinus fangiana HOM05D005029 ORTHO05D006052 3.3e-43 179.1 168 62.5
CiPaw.07G196600 Carya illinoinensis HOM05D005029 ORTHO05D006052 3.3e-43 179.1 167 60.5
Solyc07g008780.3 Solanum lycopersicum HOM05D005029 ORTHO05D006052 3.3e-43 179.1 163 63.2
Sopen07g004720 Solanum pennellii HOM05D005029 ORTHO05D006052 3.3e-43 179.1 163 63.2
arahy.Tifrunner.gnm1.ann1.J7B49U Arachis hypogaea HOM05D005029 ORTHO05D006052 4.3e-43 178.7 161 60.9
CANSAT11G1104 Cannabis sativa HOM05D005029 ORTHO05D006052 4.3e-43 178.7 170 60.0
Glyma.15G165600 Glycine max HOM05D005029 ORTHO05D006052 4.3e-43 178.7 163 60.7
Psat1g145480 Pisum sativum HOM05D005029 ORTHO05D006052 7.3e-43 177.9 163 60.7
VMungo1309G1415 Vigna mungo HOM05D005029 ORTHO05D006052 7.3e-43 177.9 163 60.1
Ca_02102_v3 Cicer arietinum L. HOM05D005029 ORTHO05D006052 9.5e-43 177.6 164 60.4
Lj6g0016757 Lotus japonicus HOM05D005029 ORTHO05D006052 9.5e-43 177.6 163 61.3
PGSC0003DMG400028729 Solanum tuberosum HOM05D005029 ORTHO05D006052 9.5e-43 177.6 163 62.6
arahy.Tifrunner.gnm1.ann1.K38ATV Arachis hypogaea HOM05D005029 ORTHO05D006052 1.6e-42 176.8 160 60.6
MD16G1249500 Malus domestica HOM05D005029 ORTHO05D006052 1.6e-42 176.8 168 64.3
Thecc.09G185600 Theobroma cacao HOM05D005029 ORTHO05D006052 2.1e-42 176.4 170 67.6
CiPaw.08G032800 Carya illinoinensis HOM05D005029 ORTHO05D006052 2.8e-42 176.0 167 59.9
DCAR_030818 Daucus carota HOM05D005029 ORTHO05D006052 2.8e-42 176.0 158 63.3
TPR.G7936 Trifolium pratense HOM05D005029 ORTHO05D006052 3.6e-42 175.6 166 59.0
AUR62021347 Chenopodium quinoa HOM05D005029 ORTHO05D006052 4.7e-42 175.3 165 58.2
BraA08t33909Z Brassica rapa HOM05D005029 ORTHO05D006052 6.2e-42 174.9 158 60.1
CARHR237880 Cardamine hirsuta HOM05D005029 ORTHO05D006052 8.0e-42 174.5 158 60.1
Cpa.g.c27842.2 Carica papaya HOM05D005029 ORTHO05D006052 8.0e-42 174.5 171 57.3
Glyma.09G059300 Glycine max HOM05D005029 ORTHO05D006052 1.0e-41 174.1 163 58.9
Phvul.009G236500 Phaseolus vulgaris HOM05D005029 ORTHO05D006052 1.0e-41 174.1 163 58.9
TWI32G0396 Tripterygium wilfordii HOM05D005029 ORTHO05D006052 1.0e-41 174.1 169 66.9
AL7G22280 Arabidopsis lyrata HOM05D005029 ORTHO05D006052 1.4e-41 173.7 158 62.7
BolC3t21207H Brassica oleracea HOM05D005029 ORTHO05D006052 1.8e-41 173.3 160 59.4
Manes.06G020200 Manihot esculenta HOM05D005029 ORTHO05D006052 3.1e-41 172.6 166 62.7
Sabra18G0116800 Salix brachista HOM05D005029 ORTHO05D006052 4.0e-41 172.2 158 73.4
AUR62033261 Chenopodium quinoa HOM05D005029 ORTHO05D006052 5.2e-41 171.8 166 57.8
Prupe.1G076300 Prunus persica HOM05D005029 ORTHO05D006052 6.8e-41 171.4 166 69.3
BcaC09g51777 Brassica carinata HOM05D000106 ORTHO05D000160 8.9e-41 171.0 156 66.0
Duzib150G1033 Durio zibethinus HOM05D005029 ORTHO05D006052 8.9e-41 171.0 168 60.1
Thhalv10025919m.g Eutrema salsugineum HOM05D005029 ORTHO05D006052 8.9e-41 171.0 158 59.5
TAR383G0036 Trochodendron aralioides HOM05D005029 ORTHO05D006052 1.2e-40 170.6 166 70.5
AT4G29960 Arabidopsis thaliana HOM05D005029 ORTHO05D006052 1.5e-40 170.2 160 67.5
THA.LOC104803957 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.5e-40 170.2 162 59.9
THA.LOC104803983 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 1.5e-40 170.2 162 59.9
Cc00_g10760 Coffea canephora HOM05D005029 ORTHO05D006052 2.6e-40 169.5 165 61.2
Sp7g27770 Schrenkiella parvula HOM05D005029 ORTHO05D006052 4.4e-40 168.7 158 58.9
Hund26310 Selenicereus undatus HOM05D005029 ORTHO05D006052 5.8e-40 168.3 163 57.1
BcaC01g01206 Brassica carinata HOM05D005029 ORTHO05D006052 7.5e-40 167.9 162 57.4
SGA_v2.0_scaffold31G12759 Striga asiatica HOM05D005029 ORTHO05D006052 9.8e-40 167.5 161 59.6
Atru.chr7.763 Acer truncatum HOM05D005029 ORTHO05D006052 1.3e-39 167.2 162 71.6
Atru.chr7.783 Acer truncatum HOM05D005029 ORTHO05D006052 1.3e-39 167.2 162 71.6
Carub.0007s1068 Capsella rubella HOM05D005029 ORTHO05D006052 1.3e-39 167.2 158 58.9
Potri.006G075900 Populus trichocarpa HOM05D005029 ORTHO05D006052 1.3e-39 167.2 163 58.3
A08p19470 Brassica napus HOM05D005029 ORTHO05D006052 1.7e-39 166.8 155 58.1
CsaV3_1G031840 Cucumis sativus L. HOM05D005029 ORTHO05D006052 2.2e-39 166.4 170 62.9
Potri.018G143000 Populus trichocarpa HOM05D005029 ORTHO05D006052 2.2e-39 166.4 163 69.3
EL10Ac8g18332 Beta vulgaris HOM05D005029 ORTHO05D006052 3.7e-39 165.6 166 55.4
Migut.L01885 Erythranthe guttata HOM05D005029 ORTHO05D006052 3.7e-39 165.6 163 58.3
BcaNung00506 Brassica carinata HOM05D005029 ORTHO05D006052 6.4e-39 164.9 161 60.2
FvH4_4g07340 Fragaria vesca HOM05D005029 ORTHO05D006052 4.1e-38 162.2 161 55.3
THA.LOC104814654 Tarenaya hassleriana HOM05D005029 ORTHO05D006052 7.0e-38 161.4 162 58.0
Lalb_Chr11g0074801 Lupinus albus HOM05D005029 ORTHO05D006052 9.2e-38 161.0 162 57.4
Oeu034799.1 Olea europaea HOM05D005029 ORTHO05D006052 9.2e-38 161.0 168 53.6
Aqoxy7G02787 Aquilegia oxysepala HOM05D005029 ORTHO05D006052 1.2e-37 160.6 164 63.4
MBI19_g21652_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 2.0e-37 159.8 159 63.5
RcHm_v2.0_Chr4g0399711 Rosa chinensis HOM05D005029 ORTHO05D006052 2.0e-37 159.8 161 54.7
Sc16g0010440 Simmondsia chinensis HOM05D005029 ORTHO05D006052 2.0e-37 159.8 164 54.3
TAR626G1810 Trochodendron aralioides HOM05D005029 ORTHO05D006052 2.0e-37 159.8 167 56.9
FAN12G1304 Fragaria x ananassa HOM05D005029 ORTHO05D006052 2.7e-37 159.5 159 54.7
FAN22G0020 Fragaria x ananassa HOM05D005029 ORTHO05D006052 3.5e-37 159.1 161 54.7
C03p88970 Brassica napus HOM05D005029 ORTHO05D006052 6.0e-37 158.3 155 56.1
Ah.09g230060 Amaranthus hybridus HOM05D005029 ORTHO05D006052 7.8e-37 157.9 164 51.8
FAN17G0071 Fragaria x ananassa HOM05D005029 ORTHO05D006052 7.8e-37 157.9 176 51.1
FAN07G2409 Fragaria x ananassa HOM05D005029 ORTHO05D006052 1.0e-36 157.5 161 53.4
MELO3C017433.2 Cucumis melo HOM05D005029 ORTHO05D006052 1.3e-36 157.1 165 66.7
GSVIVG01010867001 Vitis vinifera HOM05D005029 ORTHO05D006052 1.7e-36 156.8 156 62.8
Aa31LG2G20590 Aethionema arabicum HOM05D005029 ORTHO05D006052 2.3e-36 156.4 169 54.4
Nn7g36649 Nelumbo nucifera HOM05D005029 ORTHO05D006052 3.0e-36 156.0 167 55.7
SHI09006 Sapria himalayana HOM05D005029 ORTHO05D006052 3.0e-36 156.0 159 52.8
PSO170G2568 Papaver somniferum HOM05D005029 ORTHO05D006052 5.0e-36 155.2 164 56.1
MBI13_g01742_MAGBIO Magnolia biondii HOM05D005029 ORTHO05D006052 6.6e-36 154.8 165 62.4
Ciclev10009010m.g Citrus clementina HOM05D005029 ORTHO05D006052 8.6e-36 154.5 154 58.4
Sabra06G0056600 Salix brachista HOM05D005029 ORTHO05D006052 8.6e-36 154.5 185 51.9
PSO063G5693 Papaver somniferum HOM05D005029 ORTHO05D006052 1.5e-35 153.7 164 55.5
unitig_27.g24759 Utricularia gibba HOM05D005029 ORTHO05D006052 2.5e-35 152.9 160 54.4
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 1.6e-34 150.2 163 71.8
Ah.14g083530 Amaranthus hybridus HOM05D005029 ORTHO05D006052 4.7e-34 148.7 164 51.8
unitig_699.g19404 Utricularia gibba HOM05D005029 ORTHO05D006052 8.1e-34 147.9 162 51.2
C07p57380 Brassica napus HOM05D005029 ORTHO05D006052 2.3e-33 146.4 157 54.1
BcaC09g51764 Brassica carinata HOM05D005029 ORTHO05D006052 5.2e-33 145.2 157 53.5
C01p09110 Brassica napus HOM05D005029 ORTHO05D006052 5.2e-33 145.2 157 53.5
BolC1t00902H Brassica oleracea HOM05D005029 ORTHO05D006052 5.2e-33 145.2 157 53.5
BraA01t00761Z Brassica rapa HOM05D005029 ORTHO05D006052 8.9e-33 144.4 159 52.8
A01p08140 Brassica napus HOM05D005029 ORTHO05D006052 1.2e-32 144.1 160 52.5
Sed0026503 Sechium edule HOM05D005029 ORTHO05D006052 2.0e-32 143.3 166 52.4
Duzib168G1982 Durio zibethinus HOM05D005029 ORTHO05D006052 5.8e-32 141.7 157 66.9
CDE04G3679 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 1.3e-31 140.6 153 49.0
BcaC07g37961 Brassica carinata HOM05D005029 ORTHO05D006052 3.7e-31 139.0 162 51.9
Dinv25437 Davidia involucrata HOM05D005029 ORTHO05D006052 2.4e-30 136.3 90 83.3
CDE02G0552 Ceratophyllum demersum HOM05D005029 ORTHO05D006052 4.1e-30 135.6 151 49.7
Nn2g14879 Nelumbo nucifera HOM05D005029 ORTHO05D006052 4.1e-30 135.6 166 51.2
PGR142G1735 Punica granatum HOM05D005029 ORTHO05D006052 5.4e-30 135.2 87 82.8
CSS0012939 Camellia sinensis var. sinensis HOM05D005029 ORTHO05D006052 1.2e-29 134.0 165 63.0
Lalb_Chr13g0300031 Lupinus albus HOM05D005029 ORTHO05D006052 1.2e-29 134.0 163 51.5
ATR0626G110 Amborella trichopoda HOM05D005029 ORTHO05D006052 7.8e-29 131.3 157 48.4
Os04g0606800 Oryza sativa ssp. japonica HOM05D005029 ORTHO05D006052 7.3e-27 124.8 166 47.0
SEGI_23735 Sequoiadendron giganteum HOM05D005029 ORTHO05D006052 9.5e-27 124.4 162 51.9
Oeu044675.2 Olea europaea HOM05D005029 ORTHO05D006052 2.1e-26 123.2 161 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2110 Anthoceros agrestis HOM05D005029 ORTHO05D006052 8.1e-26 121.3 168 47.6
Zm00001eb071460 Zea mays HOM05D005029 ORTHO05D006052 8.9e-25 117.9 160 46.2
HPP92_004703 Vanilla planifolia HOM05D005029 ORTHO05D006052 7.6e-24 114.8 165 44.2
SMO358G0278 Selaginella moellendorffii HOM05D005029 ORTHO05D006052 1.3e-23 114.0 174 49.4
Mapoly0076s0086 Marchantia polymorpha HOM05D005029 ORTHO05D006052 1.7e-23 113.6 174 40.2
BcaB06g28011 Brassica carinata HOM05D005029 ORTHO05D006052 2.2e-23 113.2 89 67.4
Zm00001eb430500 Zea mays HOM05D005029 ORTHO05D006052 2.9e-23 112.8 161 45.3
Pp3c9_8340 Physcomitrium patens HOM05D005029 ORTHO05D006052 1.6e-21 107.1 163 43.6
Migut.J00802 Erythranthe guttata HOM05D005029 ORTHO05D006052 7.8e-21 104.8 161 41.0
Rhsim01G0118000 Rhododendron simsii HOM05D005029 ORTHO05D006052 3.0e-20 102.8 115 50.4
BcaC05g25672 Brassica carinata HOM05D005029 ORTHO05D006052 2.4e-17 93.2 90 62.2
BolC6t39910H Brassica oleracea HOM05D005029 ORTHO05D006052 4.4e-16 89.0 80 62.5
A03p59350 Brassica napus HOM05D005029 ORTHO05D006052 9.3e-14 81.3 132 40.9
CBR_g52634 Chara braunii HOM05D005029 ORTHO05D006052 2.5e-11 73.2 82 46.3
BcaB04g18770 Brassica carinata HOM05D005029 ORTHO05D006052 1.5e-08 63.9 42 81.0


User provided reference genes

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