Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.6e-86 322.8 173 100.0
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-84 316.2 174 98.9
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.9e-79 299.3 174 95.4
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 5.6e-71 271.2 177 83.6
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 3.1e-69 265.4 177 79.7
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 4.0e-69 265.0 177 79.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.5e-68 263.1 172 80.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 4.5e-68 261.5 174 81.6
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.6e-68 260.8 176 81.2
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.2e-67 259.2 174 78.7
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 2.9e-67 258.8 179 79.9
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.8e-67 258.5 176 79.5
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 4.9e-67 258.1 176 80.7
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 4.9e-67 258.1 176 78.4
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.9e-67 258.1 176 79.0
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 8.4e-67 257.3 173 79.8
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 8.4e-67 257.3 172 78.5
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 8.4e-67 257.3 167 81.4
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 8.4e-67 257.3 181 77.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 8.4e-67 257.3 181 77.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 8.4e-67 257.3 181 77.3
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 8.4e-67 257.3 176 77.8
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.1e-66 256.9 176 78.4
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.4e-66 256.5 172 77.3
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 78.7
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.9e-66 256.1 176 78.4
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.4e-66 255.8 177 79.7
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 2.4e-66 255.8 179 79.9
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 2.4e-66 255.8 179 79.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 3.2e-66 255.4 169 80.5
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 3.2e-66 255.4 179 79.9
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 4.2e-66 255.0 174 76.4
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.2e-66 255.0 179 76.5
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.4e-66 254.6 177 78.5
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.4e-66 254.6 179 77.7
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 7.1e-66 254.2 174 78.7
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.2e-65 253.4 173 79.8
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.2e-65 253.4 175 78.9
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.6e-65 253.1 177 78.0
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.1e-65 252.7 177 78.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.7e-65 252.3 179 77.1
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 2.7e-65 252.3 180 78.3
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.7e-65 252.3 178 74.7
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.7e-65 252.3 175 76.0
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-65 251.9 176 76.7
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.5e-65 251.9 176 76.7
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 3.5e-65 251.9 176 77.3
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 6.0e-65 251.1 174 75.3
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 7.9e-65 250.8 178 75.3
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.0e-64 250.4 176 76.1
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.0e-64 250.4 176 76.1
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.8e-64 249.6 174 76.4
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.8e-64 249.6 176 75.6
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.8e-64 249.6 153 83.7
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.0e-64 248.8 176 76.1
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 3.9e-64 248.4 166 79.5
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 5.1e-64 248.1 169 77.5
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 5.1e-64 248.1 176 76.7
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 6.7e-64 247.7 174 73.0
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 6.7e-64 247.7 174 73.0
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 6.7e-64 247.7 178 74.2
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 6.7e-64 247.7 161 83.2
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 8.7e-64 247.3 154 83.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.1e-63 246.9 174 75.9
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-63 246.5 174 73.0
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.5e-63 246.5 174 73.0
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.5e-63 246.5 177 73.4
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.9e-63 246.1 178 73.0
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 2.5e-63 245.7 178 73.6
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.5e-63 245.7 173 75.7
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 2.5e-63 245.7 177 74.6
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.5e-63 245.7 165 77.6
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 5.6e-63 244.6 165 80.6
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 7.4e-63 244.2 162 79.6
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.3e-62 243.4 177 75.7
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.6e-62 243.0 175 72.6
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 2.1e-62 242.7 177 74.0
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 2.1e-62 242.7 177 72.9
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 4.8e-62 241.5 175 72.6
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 6.2e-62 241.1 175 72.0
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 6.2e-62 241.1 175 72.6
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 6.2e-62 241.1 153 83.0
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.2e-62 241.1 160 80.0
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 8.1e-62 240.7 175 72.0
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.8e-61 239.6 177 72.3
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.8e-61 239.6 155 79.4
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.4e-61 239.2 153 83.0
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.4e-61 239.2 178 73.6
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.0e-61 238.4 177 72.3
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 5.3e-61 238.0 176 72.7
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.2e-60 236.9 161 76.4
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.5e-60 235.0 179 73.7
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 4.5e-60 235.0 178 70.8
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.7e-59 233.0 175 72.6
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.2e-59 232.6 155 79.4
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.9e-59 232.3 174 71.8
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 2.9e-59 232.3 175 70.9
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 4.9e-59 231.5 154 78.6
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 8.4e-59 230.7 151 78.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.1e-58 230.3 175 70.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.9e-58 229.6 151 78.8
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.2e-58 228.4 159 73.6
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.5e-57 225.3 155 78.7
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 3.9e-56 221.9 176 68.8
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.5e-55 219.9 172 70.3
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.8e-54 215.7 139 78.4
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.1e-53 213.8 162 71.6
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.2e-51 206.1 150 72.7
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 8.4e-51 204.1 152 72.4
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.2e-49 200.3 131 79.4
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.8e-48 196.4 118 87.3
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 3.0e-48 195.7 153 64.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.9e-47 193.0 164 66.5
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 3.3e-47 192.2 154 66.9
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.3e-46 190.3 118 84.7
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 6.3e-46 188.0 120 83.3
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 9.0e-45 184.1 107 86.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 8.5e-43 177.6 107 84.1
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.1e-42 177.2 121 78.5
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.1e-42 177.2 108 87.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 3.6e-41 172.2 131 67.9
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.4e-40 170.2 152 58.6
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 4.3e-39 165.2 91 94.5
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 2.0e-36 156.4 129 67.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.1e-26 124.0 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.8e-16 87.8 106 55.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 2.6e-07 59.7 113 43.4


User provided reference genes

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