Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 5.6e-87 324.3 174 100.0
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-84 316.2 174 98.9
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 7.1e-82 307.4 174 96.6
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 4.6e-73 278.1 177 84.2
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 2.5e-71 272.3 177 80.2
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 3.3e-71 271.9 177 80.2
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.3e-70 270.0 172 81.4
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.6e-70 269.6 174 82.8
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 6.3e-70 267.7 176 81.8
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.8e-69 266.2 174 79.3
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.8e-69 266.2 179 80.4
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.4e-69 265.8 176 80.1
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.1e-69 265.4 176 81.2
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.1e-69 265.4 176 79.0
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.1e-69 265.4 176 79.5
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 4.1e-69 265.0 176 79.0
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 5.3e-69 264.6 181 77.9
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 5.3e-69 264.6 181 77.9
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 5.3e-69 264.6 181 77.9
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 6.9e-69 264.2 173 80.3
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 6.9e-69 264.2 172 79.1
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 6.9e-69 264.2 167 82.0
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.2e-68 263.5 176 79.0
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.2e-68 263.5 172 77.9
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.5e-68 263.1 177 80.2
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.5e-68 263.1 178 79.2
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.5e-68 263.1 179 77.7
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.5e-68 263.1 176 79.0
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.5e-68 263.1 179 80.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.5e-68 263.1 179 80.4
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 2.0e-68 262.7 169 81.1
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.0e-68 262.7 179 80.4
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.4e-68 261.9 174 77.0
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.4e-68 261.9 179 78.2
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.5e-68 261.5 177 79.1
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 4.5e-68 261.5 174 79.3
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.0e-67 260.4 173 80.3
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.0e-67 260.4 175 79.4
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.0e-67 260.4 175 77.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-67 260.0 177 78.5
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.3e-67 260.0 176 78.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.7e-67 259.6 179 77.7
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 1.7e-67 259.6 180 78.9
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.7e-67 259.6 177 79.1
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.2e-67 259.2 178 75.3
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.9e-67 258.8 176 77.3
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.9e-67 258.8 176 77.3
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 3.8e-67 258.5 174 75.9
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 6.5e-67 257.7 178 75.8
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.5e-67 257.3 176 76.7
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 8.5e-67 257.3 176 76.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.1e-66 256.9 174 77.0
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.4e-66 256.5 176 76.1
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.4e-66 256.5 153 84.3
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 2.5e-66 255.8 161 84.5
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.5e-66 255.8 176 76.7
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.5e-66 255.8 166 80.1
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.2e-66 255.4 169 78.1
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 4.2e-66 255.0 174 73.6
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 4.2e-66 255.0 174 73.6
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 4.2e-66 255.0 176 77.3
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 5.5e-66 254.6 178 74.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 7.2e-66 254.2 154 83.8
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 9.3e-66 253.8 174 76.4
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 9.3e-66 253.8 174 73.6
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 9.3e-66 253.8 174 73.6
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 9.3e-66 253.8 177 74.0
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-65 253.4 178 73.6
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.6e-65 253.1 178 74.2
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.6e-65 253.1 177 75.1
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.6e-65 253.1 165 78.2
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.1e-65 252.7 173 76.3
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.1e-65 252.7 165 81.8
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.6e-65 251.5 177 76.8
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.0e-64 250.4 175 73.1
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.3e-64 250.0 177 74.6
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.8e-64 249.6 177 73.4
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 3.0e-64 248.8 175 73.1
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.0e-64 248.8 162 79.6
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 3.9e-64 248.4 175 72.6
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 3.9e-64 248.4 175 73.1
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.9e-64 248.4 153 83.7
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 3.9e-64 248.4 160 80.6
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.1e-64 248.1 175 72.6
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.1e-63 246.9 177 72.9
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.5e-63 246.5 155 80.0
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.9e-63 246.1 153 83.7
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 2.5e-63 245.7 177 72.9
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.5e-63 245.7 178 74.2
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 4.3e-63 245.0 176 73.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.8e-62 242.3 179 74.3
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 3.7e-62 241.9 161 76.4
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 3.7e-62 241.9 178 71.3
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.4e-61 240.0 175 73.1
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.8e-61 239.6 175 71.4
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.4e-61 239.2 174 72.4
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 4.1e-61 238.4 154 79.2
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.1e-61 238.4 175 72.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 6.9e-61 237.7 151 79.5
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 9.1e-61 237.3 155 79.4
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.0e-59 233.8 151 78.8
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.3e-59 233.4 159 73.6
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.4e-58 229.9 155 78.7
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 2.5e-58 229.2 176 69.3
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 9.4e-58 227.3 172 70.9
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.1e-55 220.3 139 78.4
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 4.4e-55 218.4 162 71.6
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 6.9e-53 211.1 152 73.0
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 9.1e-53 210.7 150 72.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.0e-51 207.2 131 80.2
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.9e-50 203.0 118 88.1
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.5e-50 202.6 153 65.4
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 2.7e-49 199.1 164 67.1
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 4.7e-49 198.4 154 67.5
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 5.2e-48 194.9 120 84.2
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.7e-48 194.5 118 84.7
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.8e-45 186.4 107 87.9
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 7.0e-45 184.5 121 79.3
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 4.5e-44 181.8 108 87.0
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.7e-43 179.9 107 85.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.5e-42 176.8 131 67.9
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 5.5e-42 174.9 152 58.6
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 6.7e-40 167.9 91 95.6
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.3e-38 163.7 129 68.2
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 7.0e-29 131.3 123 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.6e-17 92.4 106 55.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 2.3e-08 63.2 119 42.9


User provided reference genes

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