Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A574T36 Lonicera japonica HOM05D000101 ORTHO05D003282 6.0e-99 364.4 214 100.0
Lj5C584T0 Lonicera japonica HOM05D000101 ORTHO05D003282 7.7e-86 320.9 241 70.1
Lj5A582T23 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-85 320.1 241 69.7
Lj5C15T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-82 310.5 240 67.9
Lj5C573T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.8e-82 309.7 241 68.0
Lj5C583T4 Lonicera japonica HOM05D000101 ORTHO05D003282 2.3e-82 309.3 241 67.6
Lj5C574T6 Lonicera japonica HOM05D000101 ORTHO05D003282 3.4e-78 295.4 241 64.7
Lj5P578T9 Lonicera japonica HOM05D000101 ORTHO05D003282 9.7e-73 277.3 229 64.2
Lj5P583T36 Lonicera japonica HOM05D000101 ORTHO05D003282 1.3e-72 276.9 229 63.3
Lj5C585G3 Lonicera japonica HOM05D000101 ORTHO05D003282 1.4e-71 273.5 240 62.1
Lj5C580T1 Lonicera japonica HOM05D000101 ORTHO05D003282 4.1e-71 271.9 240 62.1
Lj5C18T0 Lonicera japonica HOM05D000101 ORTHO05D003282 9.1e-71 270.8 240 61.2
Lj5A14G12 Lonicera japonica HOM05D000101 ORTHO05D003282 4.5e-70 268.5 149 87.9
Lj5C575G2 Lonicera japonica HOM05D000101 ORTHO05D003282 6.1e-67 258.1 212 64.6
Lj5P276T14 Lonicera japonica HOM05D000101 ORTHO05D003282 3.7e-56 222.2 242 52.1
Lj5C275T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.8e-55 219.9 242 52.1
Lj5A570T22 Lonicera japonica HOM05D000101 ORTHO05D003282 2.0e-49 199.9 212 52.8
Lj5A273T45 Lonicera japonica HOM05D000101 ORTHO05D003282 2.9e-40 169.5 149 57.0
Lj5C304T0 Lonicera japonica HOM05D000101 ORTHO05D003282 1.1e-39 167.5 245 43.7
Lj5C293G2 Lonicera japonica HOM05D000101 ORTHO05D003282 7.0e-39 164.9 245 43.3
Lj5P602T19 Lonicera japonica HOM05D000101 ORTHO05D003282 4.6e-38 162.2 243 42.4
Lj5P276T58 Lonicera japonica HOM05D000101 ORTHO05D003282 1.0e-37 161.0 247 42.9
Lj5P278T58 Lonicera japonica HOM05D000101 ORTHO05D003282 2.3e-37 159.8 247 41.7
Lj5C606T4 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-36 156.8 154 56.5
Lj5A271T96 Lonicera japonica HOM05D000101 ORTHO05D003282 2.5e-36 156.4 242 42.6
Lj5C274T1 Lonicera japonica HOM05D000101 ORTHO05D003282 2.1e-35 153.3 125 63.2
Lj5A361T45 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-31 140.2 244 38.1
Lj5C367T1 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-31 140.2 244 38.1
Lj5C602G2 Lonicera japonica HOM05D000101 ORTHO05D003282 1.9e-31 140.2 154 52.6
Lj5C363T1 Lonicera japonica HOM05D000101 ORTHO05D003282 2.4e-31 139.8 244 39.3
Lj5P277T28 Lonicera japonica HOM05D000101 ORTHO05D003282 3.5e-30 136.0 158 51.3
Lj5P280T35 Lonicera japonica HOM05D000101 ORTHO05D003282 2.3e-29 133.3 127 57.5
Lj5A368T45 Lonicera japonica HOM05D000101 ORTHO05D003282 1.1e-28 131.0 247 38.9
Lj5C359T4 Lonicera japonica HOM05D000101 ORTHO05D003282 1.1e-28 131.0 247 39.7
Lj5C364T5 Lonicera japonica HOM05D000101 ORTHO05D003282 3.3e-28 129.4 149 48.3
HanXRQChr03g0065841 Helianthus annuus HOM05D000101 ORTHO05D003282 4.7e-27 125.6 149 46.3
Lj5C375T0 Lonicera japonica HOM05D000101 ORTHO05D003282 2.3e-26 123.2 151 45.7
Lj5C601T5 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-25 120.9 243 36.6
Actinidia38982 Actinidia chinensis HOM05D000101 ORTHO05D003282 3.4e-25 119.4 152 42.1
Lj5C385T2 Lonicera japonica HOM05D000101 ORTHO05D003282 3.4e-25 119.4 150 45.3
Lj5P366T9 Lonicera japonica HOM05D000101 ORTHO05D003282 3.4e-25 119.4 236 37.3
Lj5C276T11 Lonicera japonica HOM05D000101 ORTHO05D003282 9.8e-25 117.9 245 35.1
Lj5P606T11 Lonicera japonica HOM05D000101 ORTHO05D003282 1.7e-24 117.1 183 40.4
CSS0015515 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 5.4e-23 112.1 143 42.0
Dinv29663 Davidia involucrata HOM05D000101 ORTHO05D003282 7.1e-23 111.7 144 41.7
ECA234G1788 Erigeron canadensis HOM05D000101 ORTHO05D003282 1.2e-22 110.9 157 40.1
CSS0050315 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 4.6e-22 109.0 150 43.3
DCAR_001710 Daucus carota HOM05D000101 ORTHO05D003282 1.3e-21 107.5 149 42.3
Actinidia26187 Actinidia chinensis HOM05D000101 ORTHO05D003282 5.6e-20 102.1 148 39.2
RhsimUnG0032200 Rhododendron simsii HOM05D000101 ORTHO05D003282 8.1e-19 98.2 144 38.2
Rhsim11G0119400 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.8e-18 97.1 144 38.2
Lj5A278T75 Lonicera japonica HOM05D000101 ORTHO05D003282 2.0e-17 93.6 98 54.1
RhsimUnG0074800 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.6e-17 93.2 146 35.6
RhsimUnG0032000 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.4e-17 92.8 152 36.2
Lsat_1_v5_gn_9_121401 Lactuca sativa HOM05D000101 ORTHO05D003282 4.4e-17 92.4 138 37.7
RhsimUnG0083100 Rhododendron simsii HOM05D000101 ORTHO05D003282 9.9e-17 91.3 146 37.0
vmacro01689 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 2.2e-16 90.1 145 36.6
CSS0037676 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D003282 2.9e-16 89.7 144 38.2
Dinv29665 Davidia involucrata HOM05D000101 ORTHO05D003282 6.4e-16 88.6 145 37.2
Rhsim11G0118800 Rhododendron simsii HOM05D000101 ORTHO05D003282 6.4e-16 88.6 144 36.1
RhsimUnG0074600 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.1e-15 87.8 148 35.8
Rhsim11G0120300 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.4e-15 87.4 146 36.3
Rhsim11G0119600 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.4e-15 85.5 141 36.2
Rhsim11G0120700 Rhododendron simsii HOM05D000101 ORTHO05D003282 7.1e-15 85.1 146 35.6
Rhsim11G0062300 Rhododendron simsii HOM05D000101 ORTHO05D003282 2.1e-14 83.6 148 40.5
Lju1295A1G15 Lonicera japonica HOM05D000101 ORTHO05D003282 6.0e-14 82.0 41 95.1
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 1.3e-13 80.9 145 33.8
arahy.Tifrunner.gnm1.ann1.8BMB32 Arachis hypogaea HOM05D000101 ORTHO05D003282 2.3e-13 80.1 113 35.4
Thecc.03G111300 Theobroma cacao HOM05D000101 ORTHO05D003282 2.3e-13 80.1 148 33.8
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 3.9e-13 79.3 146 33.6
Lj4g0017827 Lotus japonicus HOM05D000101 ORTHO05D003282 3.9e-13 79.3 140 35.0
RhsimUnG0074400 Rhododendron simsii HOM05D000101 ORTHO05D003282 3.9e-13 79.3 144 33.3
Glyma.08G123300 Glycine max HOM05D000101 ORTHO05D003282 5.1e-13 79.0 112 41.1
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 6.6e-13 78.6 155 33.5
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 8.6e-13 78.2 148 33.1
Glyma.05G165600 Glycine max HOM05D000101 ORTHO05D003282 1.5e-12 77.4 112 39.3
Rhsim11G0064400 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.5e-12 77.4 148 38.5
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 1.9e-12 77.0 148 33.8
VMungo0251G1948 Vigna mungo HOM05D000101 ORTHO05D003282 1.9e-12 77.0 113 40.7
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 2.5e-12 76.6 148 33.8
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 4.3e-12 75.9 148 33.8
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 4.3e-12 75.9 142 31.7
PGR042G3596 Punica granatum HOM05D000101 ORTHO05D003282 5.6e-12 75.5 146 35.6
Rhsim11G0121000 Rhododendron simsii HOM05D000101 ORTHO05D003282 5.6e-12 75.5 148 33.1
Lj5A364T42 Lonicera japonica HOM05D000101 ORTHO05D003282 1.2e-11 74.3 137 38.7
Cfa026040 Carpinus fangiana HOM05D000101 ORTHO05D003282 1.6e-11 73.9 147 34.0
QL02p102261 Quercus lobata HOM05D000101 ORTHO05D003282 1.6e-11 73.9 112 38.4
QL02p102904 Quercus lobata HOM05D000101 ORTHO05D003282 1.6e-11 73.9 148 35.8
Duzib205G1449 Durio zibethinus HOM05D000101 ORTHO05D003282 2.1e-11 73.6 146 32.9
Cfa026050 Carpinus fangiana HOM05D000101 ORTHO05D003282 2.8e-11 73.2 156 36.5
Dinv06313 Davidia involucrata HOM05D000101 ORTHO05D003282 8.1e-11 71.6 220 27.7
QL02p102193 Quercus lobata HOM05D000101 ORTHO05D003282 1.1e-10 71.2 143 32.9
Haze_10012 Corylus avellana HOM05D000101 ORTHO05D003282 4.0e-10 69.3 140 35.7
QL02p102834 Quercus lobata HOM05D000101 ORTHO05D003282 4.0e-10 69.3 143 32.9
Thecc.02G013300 Theobroma cacao HOM05D000101 ORTHO05D003282 4.0e-10 69.3 90 40.0
Haze_10009 Corylus avellana HOM05D000101 ORTHO05D003282 5.2e-10 68.9 91 41.8
Thecc.02G013100 Theobroma cacao HOM05D000101 ORTHO05D003282 1.5e-09 67.4 114 33.3
Eucgr.G00086 Eucalyptus grandis HOM05D000244 ORTHO05D002559 3.4e-09 66.2 133 38.3
GSVIVG01023203001 Vitis vinifera HOM05D000101 ORTHO05D003282 3.4e-09 66.2 151 29.8
QL02p102988 Quercus lobata HOM05D000101 ORTHO05D003282 4.4e-09 65.9 113 33.6
vmacro01690 Vaccinium macrocarpon HOM05D000101 ORTHO05D003282 4.4e-09 65.9 143 30.1
QL02p102345 Quercus lobata HOM05D000101 ORTHO05D003282 5.8e-09 65.5 135 31.1
GSVIVG01023210001 Vitis vinifera HOM05D000101 ORTHO05D003282 5.8e-09 65.5 139 33.8
QL02p102693 Quercus lobata HOM05D000101 ORTHO05D003282 2.9e-08 63.2 90 38.9
GSVIVG01023207001 Vitis vinifera HOM05D000101 ORTHO05D003282 2.9e-08 63.2 149 31.5
Eucgr.G00106 Eucalyptus grandis HOM05D000101 ORTHO05D002559 3.8e-08 62.8 133 36.8
Eucgr.L00913 Eucalyptus grandis HOM05D000101 ORTHO05D003282 3.8e-08 62.8 68 44.1
Hund03195 Selenicereus undatus HOM05D000101 ORTHO05D003282 3.8e-08 62.8 148 29.7
Lj5C381T0 Lonicera japonica HOM05D000101 ORTHO05D003282 6.4e-08 62.0 243 26.7
Eucgr.G00249 Eucalyptus grandis HOM05D000101 ORTHO05D003282 8.4e-08 61.6 144 33.3
Eucgr.H05030 Eucalyptus grandis HOM05D000101 ORTHO05D003282 8.4e-08 61.6 141 32.6
Eucgr.J02649 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.1e-07 61.2 144 33.3
Ah.13g077580 Amaranthus hybridus HOM05D000101 ORTHO05D003282 1.4e-07 60.8 142 31.0
Eucgr.L01865 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.4e-07 60.8 141 33.3
Eucgr.G00112 Eucalyptus grandis HOM05D000101 ORTHO05D003282 3.2e-07 59.7 143 29.4
Eucgr.G00154 Eucalyptus grandis HOM05D000101 ORTHO05D003282 3.2e-07 59.7 153 28.8
Gorai.008G200800 Gossypium raimondii HOM05D000306 ORTHO05D002559 3.2e-07 59.7 141 31.9
Eucgr.G00161 Eucalyptus grandis HOM05D000046 ORTHO05D002559 4.2e-07 59.3 131 33.6
Eucgr.H05018 Eucalyptus grandis HOM05D000101 ORTHO05D002559 4.2e-07 59.3 72 41.7
Haze_10010 Corylus avellana HOM05D000101 ORTHO05D003282 7.1e-07 58.5 153 32.0
Eucgr.G00101 Eucalyptus grandis HOM05D000101 ORTHO05D003282 9.3e-07 58.2 68 41.2
Gohir.A12G184600 Gossypium hirsutum HOM05D000306 ORTHO05D025277 1.2e-06 57.8 71 36.6
Gohir.D12G187350 Gossypium hirsutum HOM05D000306 ORTHO05D002559 1.2e-06 57.8 71 38.0
Eucgr.G00087 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.7e-06 56.6 140 31.4
Eucgr.H05031 Eucalyptus grandis HOM05D000046 ORTHO05D002559 2.7e-06 56.6 133 33.8
Eucgr.L01864 Eucalyptus grandis HOM05D000101 ORTHO05D002559 3.5e-06 56.2 144 33.3
Prupe.8G011900 Prunus persica HOM05D000101 ORTHO05D003282 4.6e-06 55.8 122 27.0
AUR62020946 Chenopodium quinoa HOM05D000101 ORTHO05D003282 6.0e-06 55.5 151 29.8
Ciclev10018699m.g Citrus clementina HOM05D000101 ORTHO05D003282 6.0e-06 55.5 140 26.4
Eucgr.G00088 Eucalyptus grandis HOM05D000101 ORTHO05D002559 6.0e-06 55.5 133 30.1


User provided reference genes

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