Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.5e-170 602.8 312 100.0
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.0e-126 454.9 288 80.2
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 6.5e-126 454.5 290 80.7
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 4.2e-125 451.8 287 79.1
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.6e-124 449.9 288 78.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.6e-124 448.4 288 78.5
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.3e-123 446.0 276 81.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 3.9e-123 445.3 283 78.8
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.9e-123 445.3 283 78.8
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 6.7e-123 444.5 288 78.1
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 6.7e-123 444.5 279 80.3
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.5e-122 443.4 307 75.2
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 7.4e-122 441.0 287 77.0
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.8e-121 439.1 288 77.4
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.8e-121 438.3 278 79.1
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 6.3e-121 438.0 301 75.4
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.4e-120 436.0 283 77.4
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 5.3e-120 434.9 279 78.1
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 9.0e-120 434.1 289 76.8
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.5e-119 433.3 274 79.2
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.4e-119 432.2 284 77.1
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 3.4e-119 432.2 274 79.2
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 7.2e-117 424.5 291 74.2
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.2e-116 423.7 275 77.8
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.1e-116 422.9 275 77.5
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 3.6e-116 422.2 277 77.3
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.0e-115 420.6 274 76.6
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.4e-115 420.2 300 73.7
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.8e-115 419.9 274 76.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.8e-115 419.9 298 71.8
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.8e-115 419.9 277 76.2
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.3e-115 419.5 274 76.6
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 5.1e-115 418.3 283 76.0
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 6.7e-115 417.9 274 76.6
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 8.8e-115 417.5 274 75.2
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.1e-114 417.2 274 76.3
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-114 417.2 275 76.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.1e-114 417.2 275 76.0
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.1e-114 417.2 275 76.0
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.1e-114 417.2 280 75.4
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 2.0e-114 416.4 284 73.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 2.0e-114 416.4 301 70.8
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.0e-114 416.4 274 76.3
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.6e-114 416.0 287 73.5
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 2.6e-114 416.0 273 77.3
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 7.4e-114 414.5 274 75.5
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 9.7e-114 414.1 276 75.7
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.2e-113 412.9 307 71.3
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.7e-113 412.1 272 75.0
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.7e-113 412.1 276 74.3
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 8.2e-113 411.0 274 74.1
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.1e-112 410.6 315 67.9
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.1e-112 410.6 274 73.7
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.4e-112 410.2 272 74.6
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.8e-112 409.8 275 74.2
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.4e-112 409.5 272 72.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 3.1e-112 409.1 272 73.2
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 4.1e-112 408.7 275 74.5
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 4.1e-112 408.7 302 69.2
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 5.3e-112 408.3 309 69.3
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 9.1e-112 407.5 274 73.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 9.1e-112 407.5 308 69.2
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.5e-111 406.8 272 72.4
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 3.4e-111 405.6 301 69.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 5.9e-111 404.8 273 76.6
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 5.9e-111 404.8 295 70.2
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 7.7e-111 404.4 277 72.9
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 7.7e-111 404.4 307 69.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.2e-110 402.9 275 74.5
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 6.5e-110 401.4 276 73.6
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.5e-109 398.3 272 72.1
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 6.1e-108 394.8 295 69.2
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 7.9e-108 394.4 272 72.4
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.0e-107 394.0 252 77.0
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.0e-107 392.5 274 70.8
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 3.9e-107 392.1 275 68.7
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 6.7e-107 391.3 233 85.4
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 7.4e-106 387.9 256 76.6
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 5.3e-104 381.7 269 74.7
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 7.0e-104 381.3 276 67.8
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.0e-103 379.8 303 64.4
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 4.5e-103 378.6 254 74.8
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.8e-102 375.6 248 77.8
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.6e-100 370.2 275 68.4
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 2.1e-100 369.8 241 77.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 3.7e-97 359.0 285 65.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.4e-96 356.3 273 67.0
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 8.8e-91 337.8 284 58.8
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 7.5e-90 334.7 221 76.9
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.8e-89 332.8 284 62.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 9.5e-85 317.8 253 60.9
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 6.8e-83 311.6 259 60.6
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 6.8e-83 311.6 275 61.8
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 5.0e-78 295.4 273 53.1
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.1e-77 294.3 283 52.3
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 1.1e-77 294.3 283 55.5
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.8e-75 287.0 275 52.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.8e-75 287.0 275 52.7
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-73 280.8 273 50.5
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-73 280.4 273 51.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.2e-73 280.0 273 52.0
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 3.7e-73 279.3 302 53.3
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.4e-73 278.5 273 49.1
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-72 276.9 273 50.2
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.2e-72 276.2 273 49.8
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.6e-66 256.5 244 49.2
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.7e-57 227.3 213 53.1
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.8e-52 209.9 273 46.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 5.4e-40 169.1 103 77.7
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 3.9e-30 136.3 129 53.5
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.6e-28 131.0 123 56.9
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 7.6e-10 68.9 42 73.8


User provided reference genes

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