Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 0.0e+00 1186.8 623 100.0
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 2.2e-72 277.7 695 38.0
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.2e-67 261.9 694 37.0
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 2.0e-62 244.6 734 34.9
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.6e-59 235.0 688 33.7
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 1.0e-58 232.3 705 34.0
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.4e-58 231.9 693 34.2
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 2.4e-55 221.1 306 48.7
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 1.2e-51 208.8 755 31.9
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 2.0e-49 201.4 713 33.2
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.3e-48 198.7 710 32.0
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 3.6e-43 180.6 710 30.7
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 3.0e-42 177.6 745 31.8
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 9.2e-39 166.0 719 29.3
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 6.6e-37 159.8 648 29.2
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.3e-34 151.4 709 27.8
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 6.4e-32 143.3 659 29.6
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 1.4e-31 142.1 307 39.7
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 1.4e-31 142.1 695 29.6
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 5.4e-31 140.2 707 28.1
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 1.2e-30 139.0 415 32.3
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 4.6e-30 137.1 674 29.2
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 3.9e-29 134.0 688 29.1
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 2.5e-28 131.3 733 30.4
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 4.3e-28 130.6 841 26.9
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 3.6e-27 127.5 728 28.8
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 8.1e-27 126.3 223 43.5
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 1.1e-26 125.9 690 27.5
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 1.4e-26 125.6 721 31.3
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 4.0e-26 124.0 731 28.9
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 5.2e-26 123.6 293 38.6
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 1.5e-25 122.1 438 30.6
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 8.3e-24 116.3 378 34.4
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 4.1e-23 114.0 697 29.8
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 1.9e-20 105.1 707 25.9
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 2.5e-20 104.8 624 27.2
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 4.3e-20 104.0 755 26.8
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 5.6e-20 103.6 715 26.4
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 9.5e-20 102.8 405 27.9
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.6e-19 102.1 721 26.6
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 4.7e-19 100.5 717 25.9
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 1.4e-18 99.0 618 25.7
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 1.8e-18 98.6 855 25.0
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 1.2e-17 95.9 310 31.3
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 1.5e-17 95.5 721 25.8
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 5.8e-17 93.6 719 25.6
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 5.8e-17 93.6 734 26.0
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 9.9e-17 92.8 799 25.0
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 1.3e-16 92.4 202 39.6
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 2.2e-16 91.7 653 25.4
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 3.8e-16 90.9 656 27.9
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 8.4e-16 89.7 128 48.4
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 6.0e-14 83.6 128 46.1
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.1e-12 79.3 297 30.0
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 1.5e-12 79.0 757 24.4
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 4.3e-12 77.4 887 23.9
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 1.2e-11 75.9 317 29.0
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 1.2e-11 75.9 785 24.6
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 1.6e-11 75.5 432 27.1
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 4.7e-11 73.9 251 31.5
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 6.2e-11 73.6 660 26.2
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 2.4e-10 71.6 678 23.5
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 4.4e-09 67.4 649 24.7
Aqoxy1G02121 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 7.6e-09 66.6 319 27.6
CDE05G0720 Ceratophyllum demersum HOM05D008208 ORTHO05D010143 4.9e-08 63.9 127 38.6
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 4.9e-08 63.9 672 24.4
CDE04G2701 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 8.4e-08 63.2 668 24.7
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 8.4e-08 63.2 696 25.9
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 9.3e-07 59.7 375 26.4
PSO210G4238 Papaver somniferum HOM05D029104 ORTHO05D010143 1.2e-06 59.3 260 27.7
PGR102G1678 Punica granatum HOM05D008208 ORTHO05D010143 1.2e-06 59.3 137 35.8
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 6.0e-06 57.0 272 29.0


User provided reference genes

Program Settings