Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 5.0e-246 854.0 428 100.0
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 1.0e-161 573.9 445 66.7
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 1.1e-144 517.3 429 62.2
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.2e-141 507.3 445 58.9
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 5.9e-138 495.0 441 60.5
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 3.8e-137 492.3 439 58.1
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 3.4e-133 479.2 446 59.2
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 1.3e-132 477.2 447 57.9
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 9.2e-131 471.1 445 56.0
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 1.2e-130 470.7 446 56.5
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.3e-129 467.2 433 57.0
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 2.3e-129 466.5 434 57.1
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 8.6e-129 464.5 442 55.9
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 2.3e-126 456.4 443 56.4
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 2.3e-126 456.4 443 53.5
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 3.1e-126 456.1 446 54.9
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 6.8e-126 454.9 427 56.0
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 2.6e-125 453.0 471 51.4
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.4e-125 452.6 431 55.0
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.3e-124 450.7 433 54.3
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 1.3e-124 450.7 447 54.1
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 1.7e-124 450.3 434 55.1
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.7e-124 449.1 433 54.5
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 4.9e-124 448.7 434 55.1
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 4.9e-124 448.7 433 54.5
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 1.4e-123 447.2 445 55.1
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.4e-123 446.4 437 54.7
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 3.2e-123 446.0 437 54.7
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 7.8e-122 441.4 433 53.1
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 3.0e-121 439.5 437 53.3
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 3.0e-121 439.5 467 49.7
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 6.6e-121 438.3 442 54.5
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 8.6e-121 438.0 446 52.5
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 4.3e-120 435.6 439 54.7
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 5.6e-120 435.3 445 53.3
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 8.0e-119 431.4 444 52.3
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 4.4e-117 425.6 444 52.5
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 1.3e-116 424.1 445 51.9
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 3.7e-116 422.5 432 53.9
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 6.4e-116 421.8 445 51.7
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 1.1e-115 421.0 445 51.7
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 1.1e-115 421.0 445 52.1
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 1.4e-115 420.6 445 51.9
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 7.0e-115 418.3 330 63.9
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 9.2e-115 417.9 330 64.2
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 4.6e-114 415.6 327 64.8
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 1.3e-113 414.1 445 50.3
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.7e-113 413.7 439 51.3
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 6.6e-113 411.8 340 63.2
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 1.1e-112 411.0 444 51.1
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 1.9e-112 410.2 432 49.1
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 3.3e-112 409.5 445 51.0
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 2.8e-111 406.4 444 49.3
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 2.8e-111 406.4 444 50.5
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 1.4e-110 404.1 444 50.0
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 1.8e-110 403.7 428 48.4
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 1.8e-110 403.7 428 48.4
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 1.8e-110 403.7 442 51.4
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 3.1e-110 402.9 437 49.0
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 4.0e-110 402.5 389 55.8
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 1.2e-109 401.0 427 48.2
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 5.8e-109 398.7 448 48.7
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 9.9e-109 397.9 426 47.9
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 9.9e-109 397.9 442 50.7
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 9.9e-109 397.9 444 48.9
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 2.2e-108 396.7 426 47.7
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 4.9e-108 395.6 447 50.8
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 4.9e-108 395.6 440 51.4
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 6.4e-108 395.2 444 47.7
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 8.3e-108 394.8 440 51.8
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 8.3e-108 394.8 443 49.9
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 4.1e-107 392.5 437 51.3
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 2.1e-106 390.2 454 47.4
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 6.0e-106 388.7 439 49.7
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 7.8e-106 388.3 448 48.2
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 1.3e-105 387.5 436 48.4
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 1.3e-105 387.5 439 51.7
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 1.7e-105 387.1 444 47.3
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 2.3e-105 386.7 443 47.2
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 6.6e-105 385.2 445 48.1
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.5e-104 384.0 427 48.0
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 4.3e-104 382.5 447 49.7
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 9.5e-104 381.3 448 49.8
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 2.4e-102 376.7 436 47.7
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 1.5e-101 374.0 443 48.8
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 1.6e-98 364.0 324 55.2
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 6.0e-98 362.1 324 54.6
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 1.0e-97 361.3 330 53.9
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 1.3e-95 354.4 432 47.0
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 2.1e-95 353.6 330 53.0
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 2.8e-95 353.2 330 53.3
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 1.1e-94 351.3 325 57.2
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 4.0e-94 349.4 325 55.1
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 2.7e-90 336.7 433 46.0
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 2.3e-89 333.6 440 41.8
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 5.8e-85 318.9 447 43.4
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 1.3e-84 317.8 495 41.4
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 1.7e-84 317.4 398 42.0
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 6.4e-84 315.5 505 41.6
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.6e-79 300.8 431 41.5
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 4.9e-76 289.3 231 65.4
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 7.1e-75 285.4 418 39.5
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 4.5e-69 266.2 378 38.4
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.0e-57 228.4 259 49.8
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.1e-54 218.4 436 38.3
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 1.9e-51 207.6 147 67.3
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 5.1e-49 199.5 158 62.0
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 5.7e-48 196.1 174 59.8
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 4.1e-46 189.9 363 34.2
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 3.2e-43 180.3 294 40.8
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 9.4e-43 178.7 349 33.0
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 7.0e-38 162.5 390 31.0
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 2.7e-29 134.0 334 30.2
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 2.8e-23 114.0 276 33.3
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 2.8e-23 114.0 276 33.3
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-19 102.1 162 35.2
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 3.4e-16 90.5 75 58.7
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 3.7e-15 87.0 91 49.5


User provided reference genes

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