Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A46T61 Lonicera japonica HOM05D003196 ORTHO05D003543 1.9e-19 99.0 88 100.0
Haze_15943 Corylus avellana HOM05D003196 ORTHO05D003543 4.3e-11 71.2 80 85.0
CANSAT56G4409 Cannabis sativa HOM05D003196 ORTHO05D003543 5.7e-11 70.9 79 73.4
TAR636G1648 Trochodendron aralioides HOM05D003196 ORTHO05D003543 1.7e-10 69.3 79 54.4
Hund18725 Selenicereus undatus HOM05D003196 ORTHO05D003543 4.8e-10 67.8 79 64.6
Thecc.06G109100 Theobroma cacao HOM05D003196 ORTHO05D003543 6.3e-10 67.4 80 58.8
TWI79G1769 Tripterygium wilfordii HOM05D003196 ORTHO05D003543 6.3e-10 67.4 91 70.3
ClCG09G000640 Citrullus lanatus HOM05D003196 ORTHO05D003543 8.2e-10 67.0 77 48.1
Prupe.3G050800 Prunus persica HOM05D003196 ORTHO05D003543 8.2e-10 67.0 79 55.7
RcHm_v2.0_Chr2g0142911 Rosa chinensis HOM05D003196 ORTHO05D003543 8.2e-10 67.0 79 64.6
CiPaw.02G140800 Carya illinoinensis HOM05D003196 ORTHO05D003543 1.8e-09 65.9 79 72.2
Nn6g35461 Nelumbo nucifera HOM05D003196 ORTHO05D003543 1.8e-09 65.9 79 46.8
Duzib192G0676 Durio zibethinus HOM05D003196 ORTHO05D003543 2.4e-09 65.5 82 61.0
CSS0003677 Camellia sinensis var. sinensis HOM05D003196 ORTHO05D003543 3.1e-09 65.1 79 77.2
CSS0004116 Camellia sinensis var. sinensis HOM05D003196 ORTHO05D003543 3.1e-09 65.1 79 82.3
Gohir.A10G060800 Gossypium hirsutum HOM05D003196 ORTHO05D003543 3.1e-09 65.1 79 57.0
QL04p071305 Quercus lobata HOM05D003196 ORTHO05D003543 3.1e-09 65.1 79 58.2
MBI01_g09953_MAGBIO Magnolia biondii HOM05D003196 ORTHO05D003543 4.1e-09 64.7 80 46.2
Gohir.D10G061900 Gossypium hirsutum HOM05D003196 ORTHO05D003543 5.3e-09 64.3 79 55.7
Cpa.g.sc25.60 Carica papaya HOM05D003196 ORTHO05D003543 6.9e-09 63.9 97 75.3
Ciclev10026551m.g Citrus clementina HOM05D003196 ORTHO05D003543 9.1e-09 63.5 86 73.3
Eucgr.F03128 Eucalyptus grandis HOM05D003196 ORTHO05D003543 9.1e-09 63.5 77 79.2
FvH4_6g33180 Fragaria vesca HOM05D003196 ORTHO05D003543 9.1e-09 63.5 79 65.8
FAN05G4539 Fragaria x ananassa HOM05D003196 ORTHO05D003543 9.1e-09 63.5 79 64.6
FAN14G0807 Fragaria x ananassa HOM05D003196 ORTHO05D003543 9.1e-09 63.5 79 65.8
TWI75G0934 Tripterygium wilfordii HOM05D003196 ORTHO05D003543 9.1e-09 63.5 92 67.4
MD09G1194300 Malus domestica HOM05D003196 ORTHO05D003543 1.2e-08 63.2 79 60.8
Atru.chr1.3680 Acer truncatum HOM05D003196 ORTHO05D003543 1.5e-08 62.8 86 73.3
Duzib235G0666 Durio zibethinus HOM05D003196 ORTHO05D003543 2.6e-08 62.0 79 63.3
Sed0023272 Sechium edule HOM05D003196 ORTHO05D003543 4.5e-08 61.2 81 50.6
Sc15g0000110 Simmondsia chinensis HOM05D003196 ORTHO05D003543 4.5e-08 61.2 82 56.1
GSVIVG01016846001 Vitis vinifera HOM05D003196 ORTHO05D003543 5.9e-08 60.8 77 51.9
MELO3C024395.2 Cucumis melo HOM05D003196 ORTHO05D003543 7.7e-08 60.5 75 72.0
CsaV3_7G034840 Cucumis sativus L. HOM05D003196 ORTHO05D003543 7.7e-08 60.5 75 69.3
PGR102G0498 Punica granatum HOM05D003196 ORTHO05D003543 1.3e-07 59.7 77 61.0
THA.LOC104822633 Tarenaya hassleriana HOM05D003196 ORTHO05D003543 1.3e-07 59.7 81 79.0
DCAR_016165 Daucus carota HOM05D003196 ORTHO05D003543 1.7e-07 59.3 79 54.4
Lalb_Chr25g0280681 Lupinus albus HOM05D003196 ORTHO05D003543 2.2e-07 58.9 79 63.3
Dinv37919 Davidia involucrata HOM05D003196 ORTHO05D003543 2.9e-07 58.5 79 73.4
PGSC0003DMG400002500 Solanum tuberosum HOM05D003196 ORTHO05D003543 5.0e-07 57.8 79 40.5
Aa31LG10G950 Aethionema arabicum HOM05D003196 ORTHO05D003543 6.5e-07 57.4 80 72.5
Aqoxy7G01222 Aquilegia oxysepala HOM05D003196 ORTHO05D003543 6.5e-07 57.4 80 65.0
Solyc03g121520.3 Solanum lycopersicum HOM05D003196 ORTHO05D003543 8.5e-07 57.0 79 79.7
THA.LOC104810345 Tarenaya hassleriana HOM05D003196 ORTHO05D003543 1.1e-06 56.6 78 65.4
Thhalv10011806m.g Eutrema salsugineum HOM05D003196 ORTHO05D003543 1.9e-06 55.8 84 66.7
CAN.G1389.12 Capsicum annuum HOM05D003196 ORTHO05D003543 2.5e-06 55.5 79 72.2
Nitab4.5_0007429g0040 Nicotiana tabacum HOM05D003196 ORTHO05D003543 2.5e-06 55.5 79 79.7
vmacro18791 Vaccinium macrocarpon HOM05D003196 ORTHO05D003543 3.2e-06 55.1 78 62.8
EL10Ac7g15773 Beta vulgaris HOM05D003196 ORTHO05D003543 5.5e-06 54.3 79 60.8
BcaC08g44178 Brassica carinata HOM05D003196 ORTHO05D003543 5.5e-06 54.3 25 88.0
C06p15800 Brassica napus HOM05D003196 ORTHO05D003543 5.5e-06 54.3 25 88.0
BolC6t36771H Brassica oleracea HOM05D003196 ORTHO05D003543 5.5e-06 54.3 25 88.0
TAR624G0259 Trochodendron aralioides HOM05D003196 ORTHO05D003543 5.5e-06 54.3 79 59.5
Ah.15g094190 Amaranthus hybridus HOM05D003196 ORTHO05D003543 7.2e-06 53.9 79 40.5
CARHR044760 Cardamine hirsuta HOM05D003196 ORTHO05D003543 7.2e-06 53.9 83 72.3
HanXRQChr10g0313061 Helianthus annuus HOM05D003196 ORTHO05D003543 9.4e-06 53.5 83 69.9


User provided reference genes

Program Settings