Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 1.2e-83 313.2 160 100.0
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 1.5e-46 189.9 94 100.0
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 5.4e-44 181.4 160 66.2
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 7.1e-44 181.0 160 65.0
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 4.6e-43 178.3 158 67.1
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 1.3e-42 176.8 160 62.5
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.3e-42 176.8 160 62.5
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.7e-42 176.4 160 61.9
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.7e-42 176.4 160 63.8
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.0e-42 175.6 160 62.5
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.0e-42 175.6 160 62.5
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 3.0e-42 175.6 160 63.8
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 3.9e-42 175.3 158 65.2
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 3.9e-42 175.3 160 63.1
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 3.9e-42 175.3 160 62.5
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.5e-41 173.3 161 65.2
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 5.6e-41 171.4 160 63.8
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 3.6e-40 168.7 160 60.0
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 3.6e-40 168.7 182 57.1
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.4e-39 166.8 160 63.1
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.8e-39 166.4 167 61.1
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 3.1e-39 165.6 160 60.0
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 3.1e-39 165.6 161 61.5
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 4.0e-39 165.2 160 60.0
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 9.0e-39 164.1 157 59.2
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.2e-38 163.7 160 60.6
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 7.6e-38 161.0 160 57.5
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 7.6e-38 161.0 160 60.0
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 1.3e-37 160.2 160 60.6
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 3.8e-37 158.7 160 60.6
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 6.4e-37 157.9 160 58.1
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 1.4e-36 156.8 160 58.1
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 2.4e-36 156.0 161 58.4
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 5.4e-36 154.8 160 59.4
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 1.2e-35 153.7 161 59.0
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 1.2e-35 153.7 160 58.8
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 1.2e-35 153.7 168 57.7
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 2.7e-35 152.5 160 56.2
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 3.5e-35 152.1 160 56.2
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 4.6e-35 151.8 160 56.9
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 4.6e-35 151.8 160 56.9
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 6.0e-35 151.4 160 55.6
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 6.0e-35 151.4 159 58.5
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 7.8e-35 151.0 160 57.5
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 7.8e-35 151.0 159 60.4
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.3e-34 150.2 159 60.4
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 2.3e-34 149.4 161 57.8
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 2.3e-34 149.4 162 53.7
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 3.0e-34 149.1 160 55.6
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 3.0e-34 149.1 160 55.0
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 3.0e-34 149.1 159 58.5
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 3.9e-34 148.7 160 56.2
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 6.6e-34 147.9 160 55.0
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 6.6e-34 147.9 152 59.9
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 8.7e-34 147.5 158 56.3
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 1.1e-33 147.1 159 57.2
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 1.1e-33 147.1 161 55.3
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 1.5e-33 146.7 160 55.6
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 1.5e-33 146.7 163 57.1
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 2.5e-33 146.0 162 51.2
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 3.3e-33 145.6 160 54.4
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 5.6e-33 144.8 158 57.0
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 5.6e-33 144.8 160 54.4
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 5.6e-33 144.8 160 53.8
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 7.3e-33 144.4 160 54.4
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 9.6e-33 144.1 160 56.2
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 9.6e-33 144.1 159 57.9
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 1.3e-32 143.7 160 54.4
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 1.3e-32 143.7 160 54.4
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 2.1e-32 142.9 160 53.8
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 2.1e-32 142.9 160 53.8
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 2.1e-32 142.9 160 54.4
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 2.1e-32 142.9 160 56.2
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 2.8e-32 142.5 158 55.1
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 4.8e-32 141.7 164 57.3
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 4.8e-32 141.7 159 57.9
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.1e-31 140.6 160 55.0
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 1.8e-31 139.8 164 53.0
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 1.8e-31 139.8 153 55.6
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.8e-31 139.8 156 50.6
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 6.9e-31 137.9 160 53.1
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 9.0e-31 137.5 161 53.4
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.2e-30 137.1 138 58.7
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 2.6e-30 136.0 169 47.9
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 3.4e-30 135.6 161 52.8
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 4.5e-30 135.2 169 48.5
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 1.7e-29 133.3 128 59.4
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 3.8e-29 132.1 124 61.3
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 3.8e-29 132.1 166 49.4
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 3.8e-29 132.1 140 53.6
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 4.2e-28 128.6 160 52.5
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 4.2e-28 128.6 174 49.4
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 1.0e-26 124.0 172 46.5
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 2.3e-26 122.9 170 47.6
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 3.9e-26 122.1 136 51.5
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 1.5e-25 120.2 159 52.8
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 1.3e-24 117.1 136 54.4
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 1.1e-23 114.0 132 51.5
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 1.4e-23 113.6 134 53.0
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 4.0e-23 112.1 127 52.0
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 2.0e-22 109.8 161 42.2
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 2.6e-22 109.4 160 44.4
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 3.4e-22 109.0 144 50.0
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 4.9e-21 105.1 92 57.6
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 2.7e-19 99.4 135 46.7
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 3.0e-18 95.9 140 42.9
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 3.9e-18 95.5 136 44.9
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 6.7e-18 94.7 148 43.9
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 9.6e-17 90.9 102 57.8
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 8.2e-16 87.8 183 39.9
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 3.4e-14 82.4 160 40.6
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 4.5e-14 82.0 104 48.1
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 1.7e-13 80.1 103 46.6
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 2.2e-13 79.7 139 37.4
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 1.1e-12 77.4 107 46.7
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.1e-12 77.4 139 37.4
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 2.7e-11 72.8 77 53.2
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 3.9e-10 68.9 105 44.8
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 8.7e-10 67.8 53 66.0
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.1e-09 67.4 52 65.4
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 1.5e-09 67.0 56 58.9
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 4.8e-08 62.0 102 41.2
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 8.2e-08 61.2 48 62.5
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 1.4e-07 60.5 58 51.7
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 3.1e-07 59.3 42 69.0
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 3.1e-07 59.3 103 40.8
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 1.0e-05 54.3 33 75.8


User provided reference genes

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