Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A436T25 Lonicera japonica HOM05D008338 ORTHO05D000921 1.0e-125 453.4 225 100.0
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 7.3e-87 324.3 268 64.6
Lj1A366G18 Lonicera japonica HOM05D008338 ORTHO05D000921 9.5e-87 323.9 275 64.0
Lju1040A2T29 Lonicera japonica HOM05D008338 ORTHO05D000921 6.2e-86 321.2 269 63.6
Lj4C727T6 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-85 320.5 269 63.6
Lj2A483T24 Lonicera japonica HOM05D008338 ORTHO05D000921 2.3e-85 319.3 223 74.4
Lj7A99T40 Lonicera japonica HOM05D008338 ORTHO05D000921 2.6e-84 315.8 270 63.0
Lju1319C4G9 Lonicera japonica HOM05D008338 ORTHO05D000921 2.6e-84 315.8 275 63.6
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 9.5e-79 297.4 270 57.8
Lj7A576T77 Lonicera japonica HOM05D008338 ORTHO05D000921 1.4e-69 266.9 269 55.8
Lj7A78G56 Lonicera japonica HOM05D008338 ORTHO05D000921 2.1e-54 216.5 206 57.3
Lj4A312T9 Lonicera japonica HOM05D008338 ORTHO05D000921 6.9e-53 211.5 186 64.0
Lj9A689T48 Lonicera japonica HOM05D008338 ORTHO05D000921 1.3e-48 197.2 109 89.0
Lj5A412T16 Lonicera japonica HOM05D008338 ORTHO05D000921 3.7e-46 189.1 198 54.5
Lj4P771T23 Lonicera japonica HOM05D008338 ORTHO05D000921 4.8e-46 188.7 109 85.3
Lj2A609T18 Lonicera japonica HOM05D008338 ORTHO05D000921 3.1e-45 186.0 198 53.5
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 5.8e-44 181.8 183 54.1
Lj4P890T11 Lonicera japonica HOM05D008338 ORTHO05D000921 7.6e-44 181.4 109 82.6
Lj1P822T28 Lonicera japonica HOM05D008338 ORTHO05D000921 1.3e-43 180.6 107 84.1
Lj1P813T6 Lonicera japonica HOM05D008338 ORTHO05D000921 6.5e-43 178.3 102 84.3
Lj2C925G1 Lonicera japonica HOM05D008338 ORTHO05D000921 4.2e-42 175.6 197 51.3
Lj7A451G35 Lonicera japonica HOM05D008338 ORTHO05D000921 5.5e-42 175.3 124 74.2
Lj1C813T1 Lonicera japonica HOM05D008338 ORTHO05D000921 3.9e-40 169.1 113 76.1
Lj6A736T79 Lonicera japonica HOM05D008338 ORTHO05D000921 7.4e-39 164.9 111 74.8
Lj2A1212T63 Lonicera japonica HOM05D008338 ORTHO05D000921 2.8e-38 162.9 164 57.9
Lj8A133T59 Lonicera japonica HOM05D008338 ORTHO05D000921 6.3e-38 161.8 204 48.5
Lj1A889T103 Lonicera japonica HOM05D008338 ORTHO05D000921 3.1e-37 159.5 159 57.9
Lj3C241T0 Lonicera japonica HOM05D008338 ORTHO05D000921 6.5e-35 151.8 106 72.6
Lj9P576T20 Lonicera japonica HOM05D008338 ORTHO05D000921 6.1e-33 145.2 89 77.5
Lj6P703T80 Lonicera japonica HOM05D008338 ORTHO05D000921 2.3e-32 143.3 136 58.8
Lj7C484G7 Lonicera japonica HOM05D008338 ORTHO05D000921 1.5e-31 140.6 97 76.3
Lj9A361G54 Lonicera japonica HOM05D008338 ORTHO05D000921 3.3e-31 139.4 139 58.3
Lj2C391G3 Lonicera japonica HOM05D008338 ORTHO05D000921 9.7e-31 137.9 181 50.3
Lj2P419T27 Lonicera japonica HOM05D008338 ORTHO05D000921 2.2e-30 136.7 76 89.5
Lj1A1074G41 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-29 134.4 116 62.1
Lj1C236T6 Lonicera japonica HOM05D008338 ORTHO05D000921 1.8e-29 133.7 113 61.9
Lj3P922T30 Lonicera japonica HOM05D008338 ORTHO05D000921 1.2e-28 131.0 90 75.6
Lj4C771T8 Lonicera japonica HOM05D008338 ORTHO05D000921 4.5e-28 129.0 91 72.5
Lj2P1171T5 Lonicera japonica HOM05D008338 ORTHO05D000921 1.3e-27 127.5 77 80.5
Lj4A232T45 Lonicera japonica HOM05D008338 ORTHO05D000921 8.5e-27 124.8 112 58.0
Lj8P612T5 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-26 124.4 88 68.2
Lju124C35T2 Lonicera japonica HOM05D008338 ORTHO05D000921 2.5e-26 123.2 93 68.8
Lj7C324T1 Lonicera japonica HOM05D008338 ORTHO05D000921 3.2e-26 122.9 81 80.2
Lj7C613T8 Lonicera japonica HOM05D008338 ORTHO05D000921 3.0e-24 116.3 73 76.7
Lj2A728G9 Lonicera japonica HOM05D008338 ORTHO05D000921 1.7e-22 110.5 168 41.7
Lj7P314T13 Lonicera japonica HOM05D008338 ORTHO05D000921 3.0e-16 89.7 57 77.2
Lj5C413T5 Lonicera japonica HOM05D008338 ORTHO05D000921 3.9e-16 89.4 138 40.6
Lj7A613T70 Lonicera japonica HOM05D008338 ORTHO05D000921 2.0e-15 87.0 115 44.3
Lj9C689T11 Lonicera japonica HOM05D008338 ORTHO05D000921 7.4e-15 85.1 52 78.8
Lj7P14T56 Lonicera japonica HOM05D008338 ORTHO05D000921 7.0e-13 78.6 82 51.2
Lj5A414T29 Lonicera japonica HOM05D008338 ORTHO05D000921 2.6e-12 76.6 86 53.5
Psat5g151680 Pisum sativum HOM05D000665 ORTHO05D000921 2.6e-12 76.6 111 38.7
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 3.5e-12 76.3 111 39.6
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 1.7e-11 73.9 109 36.7
Psat0s94g0040 Pisum sativum HOM05D000665 ORTHO05D000921 2.2e-11 73.6 109 39.4
Psat7g176640 Pisum sativum HOM05D000665 ORTHO05D000921 3.8e-11 72.8 107 39.3
Lj8C612T1 Lonicera japonica HOM05D008338 ORTHO05D000921 1.1e-10 71.2 47 78.7
Psat7g015480 Pisum sativum HOM05D000665 ORTHO05D000921 1.1e-10 71.2 107 38.3
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.5e-10 70.9 104 36.5
Dinv09638 Davidia involucrata HOM05D008473 ORTHO05D000921 4.2e-10 69.3 103 35.0
Ciclev10033776m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.5e-10 68.9 102 37.3
Psat7g003000 Pisum sativum HOM05D000665 ORTHO05D000921 5.5e-10 68.9 98 37.8
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 7.2e-10 68.6 109 34.9
TPR.G10504 Trifolium pratense HOM05D000665 ORTHO05D000921 7.2e-10 68.6 210 26.7
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.6e-09 67.4 104 34.6
Psat5g276600 Pisum sativum HOM05D003171 ORTHO05D000921 2.1e-09 67.0 87 40.2
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 4.7e-09 65.9 104 32.7
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 4.7e-09 65.9 258 23.6
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 6.1e-09 65.5 104 33.7
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 6.1e-09 65.5 104 32.7
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 6.1e-09 65.5 104 32.7
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-08 63.5 102 33.3
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-08 63.5 102 33.3
Medtr3g065345 Medicago truncatula HOM05D008338 ORTHO05D000921 5.2e-08 62.4 73 41.1
Dinv12070 Davidia involucrata HOM05D008473 ORTHO05D000921 6.7e-08 62.0 105 29.5
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 1.5e-07 60.8 103 33.0
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.0e-07 60.5 83 41.0
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 4.4e-07 59.3 102 31.4
Lj2C921T5 Lonicera japonica HOM05D008338 ORTHO05D000921 4.4e-07 59.3 47 66.0
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 4.4e-07 59.3 239 25.1
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 7.5e-07 58.5 104 32.7
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 7.5e-07 58.5 97 30.9
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.3e-06 57.8 109 31.2
Ciclev10033416m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.2e-06 57.0 99 35.4
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 2.2e-06 57.0 109 32.1
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-06 57.0 104 31.7
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 2.2e-06 57.0 104 31.7
Rhsim07G0109100 Rhododendron simsii HOM05D021294 ORTHO05D000921 2.2e-06 57.0 128 30.5
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.8e-06 56.6 104 27.9
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.8e-06 56.6 104 27.9
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.8e-06 56.6 168 26.2
CSS0007077 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.7e-06 56.2 97 29.9
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 3.7e-06 56.2 103 29.1
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 3.7e-06 56.2 109 32.1
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 3.7e-06 56.2 104 31.7
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 4.8e-06 55.8 104 31.7
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 4.8e-06 55.8 104 31.7
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 4.8e-06 55.8 96 33.3
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 4.8e-06 55.8 96 33.3
PGR119G0096 Punica granatum HOM05D003171 ORTHO05D000921 6.3e-06 55.5 98 32.7
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 6.3e-06 55.5 109 30.3
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 8.2e-06 55.1 97 32.0
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 8.2e-06 55.1 97 32.0
PGR142G0920 Punica granatum HOM05D003171 ORTHO05D000921 8.2e-06 55.1 98 32.7


User provided reference genes

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