Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A435T21 Lonicera japonica HOM05D003672 ORTHO05D004121 0.0e+00 1134.0 600 100.0
Dinv22781 Davidia involucrata HOM05D003672 ORTHO05D004121 7.3e-134 481.9 715 46.2
Lj5C102T25 Lonicera japonica HOM05D003672 ORTHO05D004121 1.4e-116 424.5 692 44.4
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla HOM05D003672 ORTHO05D004121 5.1e-103 379.4 724 39.8
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 4.2e-97 359.8 692 38.3
Dinv17414 Davidia involucrata HOM05D003672 ORTHO05D004121 7.4e-94 349.0 635 42.4
Actinidia18990 Actinidia chinensis HOM05D003672 ORTHO05D004121 7.6e-91 339.0 691 37.8
Rhsim12G0148200 Rhododendron simsii HOM05D003672 ORTHO05D004121 3.8e-90 336.7 676 39.2
Actinidia35037 Actinidia chinensis HOM05D003672 ORTHO05D004121 2.5e-89 334.0 693 38.5
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 2.7e-88 330.5 690 38.7
TAR629G1848 Trochodendron aralioides HOM05D003672 ORTHO05D004121 2.3e-87 327.4 725 36.3
Ciclev10019089m.g Citrus clementina HOM05D003672 ORTHO05D004121 3.3e-86 323.6 726 36.4
Oeu061164.2 Olea europaea HOM05D003672 ORTHO05D004121 4.3e-86 323.2 695 37.0
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 3.7e-85 320.1 685 37.8
Oeu044870.1 Olea europaea HOM05D003672 ORTHO05D004121 1.1e-84 318.5 667 38.2
Sopen03g034170 Solanum pennellii HOM05D003672 ORTHO05D004121 2.4e-84 317.4 692 37.0
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 5.3e-84 316.2 697 36.3
Solyc03g115100.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 5.3e-84 316.2 689 37.0
PGSC0003DMG400024637 Solanum tuberosum HOM05D003672 ORTHO05D004121 9.0e-84 315.5 691 36.8
DCAR_023172 Daucus carota HOM05D003672 ORTHO05D004121 2.0e-83 314.3 706 35.7
vmacro16495 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 3.4e-83 313.5 700 36.7
SalBow7G3172 Salvia bowleyana HOM05D003672 ORTHO05D004121 2.5e-81 307.4 690 37.2
MSTRG.22965 Avicennia marina HOM05D003672 ORTHO05D004121 2.1e-80 304.3 699 35.5
GSVIVG01007866001 Vitis vinifera HOM05D003672 ORTHO05D004121 2.1e-80 304.3 689 36.0
Nn4g23428 Nelumbo nucifera HOM05D003672 ORTHO05D004121 1.0e-79 302.0 731 35.8
QL10p019524 Quercus lobata HOM05D003672 ORTHO05D004121 1.3e-79 301.6 728 34.5
Cc00_g14840 Coffea canephora HOM05D003672 ORTHO05D004121 3.0e-79 300.4 684 36.1
TAR629G0952 Trochodendron aralioides HOM05D003672 ORTHO05D004121 1.1e-76 292.0 649 35.7
Nn3g17451 Nelumbo nucifera HOM05D003672 ORTHO05D004121 1.4e-76 291.6 730 34.5
Prupe.5G205200 Prunus persica HOM05D003672 ORTHO05D004121 1.4e-76 291.6 720 35.8
Potri.015G057600 Populus trichocarpa HOM05D003672 ORTHO05D004121 1.7e-74 284.6 727 34.4
Atru.chr9.577 Acer truncatum HOM05D003672 ORTHO05D004121 6.5e-74 282.7 707 34.4
Thecc.03G101900 Theobroma cacao HOM05D003672 ORTHO05D004121 2.1e-72 277.7 729 34.7
Migut.D01656 Erythranthe guttata HOM05D003672 ORTHO05D004121 8.8e-71 272.3 678 35.3
Duzib205G1655 Durio zibethinus HOM05D003672 ORTHO05D004121 5.7e-70 269.6 734 34.5
MD14G1212000 Malus domestica HOM05D003672 ORTHO05D004121 1.4e-68 265.0 611 36.3
Cfa019341 Carpinus fangiana HOM05D003672 ORTHO05D004121 9.1e-68 262.3 714 33.2
COL.COLO4_06856 Corchorus olitorius HOM05D003672 ORTHO05D004121 1.5e-67 261.5 735 34.0
Duzib084G0362 Durio zibethinus HOM05D003672 ORTHO05D004121 5.9e-67 259.6 716 34.2
Sabra15G0083600 Salix brachista HOM05D003672 ORTHO05D004121 8.5e-66 255.8 732 33.6
Cpa.g.sc94.57 Carica papaya HOM05D003672 ORTHO05D004121 1.1e-65 255.4 701 33.8
Dinv34068 Davidia involucrata HOM05D003672 ORTHO05D004121 1.6e-64 251.5 719 33.1
Manes.14G085800 Manihot esculenta HOM05D003672 ORTHO05D004121 3.0e-63 247.3 712 31.3
RcHm_v2.0_Chr7g0183101 Rosa chinensis HOM05D003672 ORTHO05D004121 3.0e-63 247.3 704 31.2
TWI60G1197 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 3.9e-63 246.9 711 32.3
CANSAT80G1081 Cannabis sativa HOM05D003672 ORTHO05D004121 8.8e-63 245.7 734 32.6
Haze_07732 Corylus avellana HOM05D003672 ORTHO05D004121 7.0e-60 236.1 826 29.3
TWI81G0716 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 1.2e-59 235.3 719 31.7
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 1.5e-59 235.0 702 32.2
CiPaw.12G008500 Carya illinoinensis HOM05D003672 ORTHO05D004121 3.5e-59 233.8 720 31.8
GSVIVG01012221001 Vitis vinifera HOM05D003672 ORTHO05D004121 4.5e-59 233.4 658 33.4
FAN13G1740 Fragaria x ananassa HOM05D003672 ORTHO05D004121 7.7e-59 232.6 756 31.2
Aqoxy1G00151 Aquilegia oxysepala HOM05D003672 ORTHO05D004121 3.8e-58 230.3 716 32.1
Gohir.D07G073000 Gossypium hirsutum HOM05D003672 ORTHO05D004121 8.5e-58 229.2 699 31.6
FAN18G3332 Fragaria x ananassa HOM05D003672 ORTHO05D004121 1.1e-57 228.8 752 31.4
PSO478G1233 Papaver somniferum HOM05D003672 ORTHO05D004121 2.5e-57 227.6 644 33.7
FvH4_5g13830 Fragaria vesca HOM05D003672 ORTHO05D004121 5.5e-57 226.5 753 31.2
Eucgr.B00592 Eucalyptus grandis HOM05D003672 ORTHO05D004121 9.4e-57 225.7 713 31.0
Gorai.001G077200 Gossypium raimondii HOM05D003672 ORTHO05D004121 2.1e-56 224.6 699 31.3
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 2.1e-56 224.6 696 31.5
FAN08G3423 Fragaria x ananassa HOM05D003672 ORTHO05D004121 4.7e-56 223.4 777 30.6
Gohir.A07G068500 Gossypium hirsutum HOM05D003672 ORTHO05D004121 1.0e-55 222.2 693 31.3
ECA232G2426 Erigeron canadensis HOM05D003672 ORTHO05D004121 5.2e-55 219.9 652 32.7
TWI15G0151 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 5.2e-55 219.9 713 31.0
PSO017G3206 Papaver somniferum HOM05D003672 ORTHO05D004121 6.7e-55 219.5 642 32.9
arahy.Tifrunner.gnm1.ann1.SKH1UB Arachis hypogaea HOM05D003672 ORTHO05D004121 1.5e-54 218.4 716 29.9
Glyma.04G162600 Glycine max HOM05D003672 ORTHO05D004121 3.3e-54 217.2 701 30.4
Lj1g0027425 Lotus japonicus HOM05D003672 ORTHO05D004121 7.4e-54 216.1 732 29.0
TPR.G12189 Trifolium pratense HOM05D003672 ORTHO05D004121 2.2e-53 214.5 709 29.5
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea HOM05D003672 ORTHO05D004121 3.7e-53 213.8 710 30.1
MBI16_g38067_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 8.2e-53 212.6 713 30.0
Phvul.010G007200 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 1.4e-52 211.8 673 30.6
Glyma.06G203700 Glycine max HOM05D003672 ORTHO05D004121 5.3e-52 209.9 698 29.8
VMungo0331G1159 Vigna mungo HOM05D003672 ORTHO05D004121 3.5e-51 207.2 676 30.0
Gorai.008G199200 Gossypium raimondii HOM05D003672 ORTHO05D004121 7.7e-51 206.1 702 29.1
Ca_14345_v3 Cicer arietinum L. HOM05D003672 ORTHO05D004121 1.3e-50 205.3 737 29.9
Gohir.A12G182700 Gossypium hirsutum HOM05D003672 ORTHO05D004121 2.2e-50 204.5 703 28.9
CiPaw.11G053900 Carya illinoinensis HOM05D003672 ORTHO05D004121 3.2e-49 200.7 525 33.1
ClCG06G015630 Citrullus lanatus HOM05D003672 ORTHO05D004121 8.0e-48 196.1 719 29.1
AT5G61040 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 1.5e-46 191.8 670 30.3
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea HOM05D003672 ORTHO05D004121 5.7e-46 189.9 722 29.1
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea HOM05D003672 ORTHO05D004121 9.8e-46 189.1 720 28.6
PGR083G2392 Punica granatum HOM05D003672 ORTHO05D004121 9.8e-46 189.1 632 31.3
CSS0037619 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D004121 1.7e-45 188.3 589 32.9
Carub.0008s2173 Capsella rubella HOM05D003672 ORTHO05D004121 4.8e-45 186.8 671 30.3
CAN.G3169.1 Capsicum annuum HOM05D002946 ORTHO05D003299 4.8e-45 186.8 401 36.7
EL10Ac5g11131 Beta vulgaris HOM05D003672 ORTHO05D004121 8.3e-45 186.0 684 30.3
AUR62021559 Chenopodium quinoa HOM05D003672 ORTHO05D004121 8.3e-45 186.0 690 29.1
MELO3C017225.2 Cucumis melo HOM05D003672 ORTHO05D004121 8.3e-45 186.0 746 28.8
SGA_v2.0_scaffold25G10960 Striga asiatica HOM05D003672 ORTHO05D004121 7.0e-44 183.0 689 31.1
THA.LOC104819401 Tarenaya hassleriana HOM05D003672 ORTHO05D004121 9.1e-44 182.6 688 28.8
CAN.G1228.24 Capsicum annuum HOM05D003672 ORTHO05D004121 1.2e-43 182.2 355 38.0
Hund09914 Selenicereus undatus HOM05D003672 ORTHO05D004121 1.2e-43 182.2 704 29.7
AUR62008531 Chenopodium quinoa HOM05D003672 ORTHO05D004121 1.6e-43 181.8 703 29.4
Ah.02g114040 Amaranthus hybridus HOM05D003672 ORTHO05D004121 2.7e-43 181.0 694 29.0
Gohir.D12G185800 Gossypium hirsutum HOM05D003672 ORTHO05D004121 3.5e-43 180.6 579 29.9
AL8G37700 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 5.9e-43 179.9 670 30.6
CAN.G1228.26 Capsicum annuum HOM05D003672 ORTHO05D004121 1.7e-42 178.3 380 38.4
Lalb_Chr13g0302861 Lupinus albus HOM05D003672 ORTHO05D004121 6.5e-42 176.4 718 28.7
Sp2g24340 Schrenkiella parvula HOM05D003672 ORTHO05D004121 6.5e-42 176.4 678 30.4
Glyma.05G021000 Glycine max HOM05D003672 ORTHO05D004121 4.2e-41 173.7 575 31.7
Thhalv10003875m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 2.1e-40 171.4 671 29.1
HanXRQChr16g0502451 Helianthus annuus HOM05D003672 ORTHO05D004121 2.7e-40 171.0 646 30.0
Hund02585 Selenicereus undatus HOM05D003672 ORTHO05D004121 1.4e-39 168.7 711 29.8
CsaV3_1G002930 Cucumis sativus L. HOM05D003672 ORTHO05D004121 1.8e-39 168.3 709 28.8
BcaC06g33181 Brassica carinata HOM05D003672 ORTHO05D004121 6.8e-39 166.4 615 29.3
Medtr3g025870 Medicago truncatula HOM05D003672 ORTHO05D004121 6.8e-39 166.4 687 27.9
Sc12g0007260 Simmondsia chinensis HOM05D003672 ORTHO05D004121 6.8e-39 166.4 392 35.2
BolC7t45002H Brassica oleracea HOM05D003672 ORTHO05D004121 1.5e-38 165.2 675 28.9
HanXRQChr09g0270231 Helianthus annuus HOM05D003672 ORTHO05D004121 1.5e-38 165.2 654 28.0
Psat2g037720 Pisum sativum HOM05D003672 ORTHO05D004121 4.4e-38 163.7 689 27.4
BraA03t13796Z Brassica rapa HOM05D003672 ORTHO05D004121 4.9e-37 160.2 676 29.0
Lalb_Chr07g0178301 Lupinus albus HOM05D003672 ORTHO05D004121 4.9e-37 160.2 683 28.0
Phvul.003G184800 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 6.3e-37 159.8 501 31.7
Actinidia31938 Actinidia chinensis HOM05D003672 ORTHO05D004121 3.1e-36 157.5 576 29.0
C07p44780 Brassica napus HOM05D003672 ORTHO05D004121 2.0e-35 154.8 550 30.2
Lsat_1_v5_gn_4_111040 Lactuca sativa HOM05D003672 ORTHO05D004121 2.3e-34 151.4 649 27.4
CARHR274750 Cardamine hirsuta HOM05D003672 ORTHO05D004121 7.2e-33 146.4 555 29.4
Lj4g0018287 Lotus japonicus HOM05D003672 ORTHO05D004121 2.6e-30 137.9 678 27.4
Ah.11g047770 Amaranthus hybridus HOM05D003672 ORTHO05D004121 3.4e-30 137.5 725 26.8
A03p46740 Brassica napus HOM05D003672 ORTHO05D004121 9.8e-30 136.0 671 28.0
Carub.0006s0690 Capsella rubella HOM05D003672 ORTHO05D004121 2.9e-29 134.4 507 28.0
Os12g0576300 Oryza sativa ssp. japonica HOM05D003672 ORTHO05D004121 2.9e-29 134.4 561 29.4
Zm00001eb029540 Zea mays HOM05D003672 ORTHO05D004121 2.9e-29 134.4 525 30.3
HPP92_007830 Vanilla planifolia HOM05D003672 ORTHO05D004121 4.9e-29 133.7 413 31.0
Rhsim12G0075200 Rhododendron simsii HOM05D003672 ORTHO05D004121 6.3e-29 133.3 762 27.2
AL6G18360 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 1.4e-28 132.1 516 30.0
BraA10t44910Z Brassica rapa HOM05D003672 ORTHO05D004121 5.4e-28 130.2 449 29.8
MBI16_g36263_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 5.9e-27 126.7 384 31.0
Aa31LG3G18520 Aethionema arabicum HOM05D003672 ORTHO05D004121 7.8e-27 126.3 673 27.0
Rhsim12G0074700 Rhododendron simsii HOM05D003672 ORTHO05D004121 7.8e-27 126.3 765 26.5
BcaB08g37298 Brassica carinata HOM05D003672 ORTHO05D004121 1.7e-26 125.2 351 33.3
Zm00001eb136280 Zea mays HOM05D003672 ORTHO05D004121 3.9e-26 124.0 370 33.2
VMungo1215G2632 Vigna mungo HOM05D003672 ORTHO05D004121 5.0e-26 123.6 198 42.9
CARHR205170 Cardamine hirsuta HOM05D003672 ORTHO05D004121 6.6e-26 123.2 623 27.1
QL03p074101 Quercus lobata HOM05D003672 ORTHO05D004121 8.6e-26 122.9 574 29.4
Haze_11907 Corylus avellana HOM05D003672 ORTHO05D004121 1.1e-25 122.5 510 28.4
Aa31LG11G2260 Aethionema arabicum HOM05D003672 ORTHO05D004121 1.9e-25 121.7 495 29.5
AT5G08010 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 3.3e-25 120.9 507 28.8
ClCG04G011810 Citrullus lanatus HOM05D003672 ORTHO05D004121 5.6e-25 120.2 526 28.1
Thhalv10013089m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 5.6e-25 120.2 542 26.9
C09p68900 Brassica napus HOM05D003672 ORTHO05D004121 4.7e-24 117.1 445 29.7
BolC9t59636H Brassica oleracea HOM05D003672 ORTHO05D004121 8.0e-24 116.3 445 30.1
A10p28610 Brassica napus HOM05D003672 ORTHO05D004121 2.3e-23 114.8 448 26.6
Cc11_g11950 Coffea canephora HOM05D003672 ORTHO05D004121 5.2e-23 113.6 553 27.1
Sp6g34930 Schrenkiella parvula HOM05D003672 ORTHO05D004121 8.9e-23 112.8 664 24.8
ATR0177G058 Amborella trichopoda HOM05D003672 ORTHO05D004121 1.2e-22 112.5 458 28.6
CiPaw.05G125000 Carya illinoinensis HOM05D003672 ORTHO05D004121 2.0e-22 111.7 467 30.4
CsaV3_1G005970 Cucumis sativus L. HOM05D003672 ORTHO05D004121 2.0e-22 111.7 521 28.4
MELO3C002028.2 Cucumis melo HOM05D003672 ORTHO05D004121 2.2e-21 108.2 521 28.2
Ciclev10033781m.g Citrus clementina HOM05D003672 ORTHO05D004121 2.4e-20 104.8 223 35.0
BcaB08g37300 Brassica carinata HOM05D003672 ORTHO05D004121 5.4e-20 103.6 240 35.0
CANSAT39G0004 Cannabis sativa HOM05D003672 ORTHO05D004121 2.0e-19 101.7 227 38.8
vmacro01315 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 2.0e-19 101.7 663 25.2
unitig_749.g13432 Utricularia gibba HOM05D003672 ORTHO05D004121 1.3e-18 99.0 365 29.3
Sabra08G0072400 Salix brachista HOM05D003672 ORTHO05D004121 3.9e-18 97.4 233 36.1
Eucgr.B03149 Eucalyptus grandis HOM05D003672 ORTHO05D004121 1.1e-17 95.9 553 24.6
PGR102G2240 Punica granatum HOM05D003672 ORTHO05D004121 2.8e-16 91.3 524 25.4
Sed0025785 Sechium edule HOM05D003672 ORTHO05D004121 3.6e-16 90.9 539 24.1
Oeu004585.2 Olea europaea HOM05D003672 ORTHO05D004121 4.0e-15 87.4 517 25.0
VMungo1215G3071 Vigna mungo HOM05D003672 ORTHO05D004121 5.2e-15 87.0 247 32.8
Migut.L01189 Erythranthe guttata HOM05D003672 ORTHO05D004121 1.2e-14 85.9 340 30.3
Potri.008G096100 Populus trichocarpa HOM05D003672 ORTHO05D004121 3.4e-14 84.3 278 33.5
QL03p074186 Quercus lobata HOM05D003672 ORTHO05D004121 7.5e-14 83.2 553 27.8
Peaxi162Scf00175g00022 Petunia axillaris HOM05D003672 ORTHO05D004121 3.7e-13 80.9 259 28.2
Atru.chr11.1624 Acer truncatum HOM05D003672 ORTHO05D004121 8.3e-13 79.7 265 30.9
PGSC0003DMG400028369 Solanum tuberosum HOM05D003672 ORTHO05D004121 1.9e-12 78.6 246 29.3
SalBow2G2767 Salvia bowleyana HOM05D003672 ORTHO05D004121 7.1e-12 76.6 368 28.3
HPP92_000460 Vanilla planifolia HOM05D003672 ORTHO05D004121 7.1e-12 76.6 397 25.7
CDE04G0191 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 2.1e-11 75.1 262 30.2
Manes.01G028000 Manihot esculenta HOM05D003672 ORTHO05D004121 1.7e-10 72.0 513 25.1
Nitab4.5_0000231g0260 Nicotiana tabacum HOM05D003672 ORTHO05D004121 3.0e-10 71.2 334 24.9
Sopen05g007060 Solanum pennellii HOM05D003672 ORTHO05D004121 6.6e-10 70.1 224 31.2
Nitab4.5_0009585g0010 Nicotiana tabacum HOM05D003672 ORTHO05D004121 1.6e-08 65.5 216 29.6
CDE07G1307 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 2.1e-08 65.1 462 23.6
Solyc05g012230.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 1.1e-07 62.8 281 28.1
SEGI_35614 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 1.8e-07 62.0 419 25.3
Actinidia19914 Actinidia chinensis HOM05D000020 ORTHO05D000156 6.8e-07 60.1 69 49.3


User provided reference genes

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