Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A325T77 Lonicera japonica HOM05D002683 ORTHO05D007757 1.3e-176 622.9 301 100.0
Actinidia16874 Actinidia chinensis HOM05D002683 ORTHO05D007757 1.7e-94 350.1 344 54.9
TAR633G1207 Trochodendron aralioides HOM05D002683 ORTHO05D007757 2.2e-94 349.7 364 51.9
CSS0049007 Camellia sinensis var. sinensis HOM05D002683 ORTHO05D007757 7.7e-92 341.3 363 53.2
CiPaw.07G031200 Carya illinoinensis HOM05D002683 ORTHO05D007757 1.5e-90 337.0 366 51.1
GSVIVG01031262001 Vitis vinifera HOM05D002683 ORTHO05D007757 1.5e-90 337.0 363 51.2
Thecc.05G325200 Theobroma cacao HOM05D002683 ORTHO05D007757 1.9e-90 336.7 365 50.7
Dinv30908 Davidia involucrata HOM05D002683 ORTHO05D007757 7.2e-90 334.7 348 54.3
Aqoxy2G02654 Aquilegia oxysepala HOM05D002683 ORTHO05D007757 4.7e-89 332.0 365 50.7
Gohir.A13G112900 Gossypium hirsutum HOM05D002683 ORTHO05D007757 6.1e-89 331.6 364 49.5
Gohir.D13G115900 Gossypium hirsutum HOM05D002683 ORTHO05D007757 1.8e-88 330.1 364 49.5
Gorai.013G130400 Gossypium raimondii HOM05D002683 ORTHO05D007757 3.0e-88 329.3 364 49.5
Prupe.6G310400 Prunus persica HOM05D002683 ORTHO05D007757 3.0e-88 329.3 366 50.0
TWI56G0626 Tripterygium wilfordii HOM05D002683 ORTHO05D007757 5.2e-88 328.6 368 49.7
DCAR_005279 Daucus carota HOM05D002683 ORTHO05D007757 6.7e-88 328.2 366 49.5
Glyma.20G095700 Glycine max HOM05D002683 ORTHO05D007757 6.7e-88 328.2 367 49.9
Phvul.007G202700 Phaseolus vulgaris HOM05D002683 ORTHO05D007757 1.2e-87 327.4 357 51.0
Cpa.g.sc48.179 Carica papaya HOM05D002683 ORTHO05D007757 2.0e-87 326.6 366 49.2
Glyma.10G146000 Glycine max HOM05D002683 ORTHO05D007757 3.3e-87 325.9 367 49.9
Manes.09G178200 Manihot esculenta HOM05D002683 ORTHO05D007757 4.4e-87 325.5 364 50.0
HanXRQChr04g0110421 Helianthus annuus HOM05D002683 ORTHO05D007757 1.3e-86 323.9 364 49.7
Cc02_g35260 Coffea canephora HOM05D002683 ORTHO05D007757 2.2e-86 323.2 366 50.5
Rhsim11G0097700 Rhododendron simsii HOM05D002683 ORTHO05D007757 2.8e-86 322.8 364 51.1
MBI19_g03278_MAGBIO Magnolia biondii HOM05D002683 ORTHO05D007757 4.8e-86 322.0 364 48.4
VMungo0720G2268 Vigna mungo HOM05D002683 ORTHO05D007757 4.8e-86 322.0 357 49.6
Potri.013G007100 Populus trichocarpa HOM05D002683 ORTHO05D007757 6.3e-86 321.6 368 48.9
arahy.Tifrunner.gnm1.ann1.941PVT Arachis hypogaea HOM05D002683 ORTHO05D007757 8.2e-86 321.2 367 49.0
Oeu053732.1 Olea europaea HOM05D002683 ORTHO05D007757 1.4e-85 320.5 365 49.6
arahy.Tifrunner.gnm1.ann1.K5JNPB Arachis hypogaea HOM05D002683 ORTHO05D007757 5.3e-85 318.5 367 48.8
FvH4_6g07800 Fragaria vesca HOM05D002683 ORTHO05D007757 5.3e-85 318.5 366 47.8
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 5.3e-85 318.5 366 47.8
Medtr1g084190 Medicago truncatula HOM05D002683 ORTHO05D007757 9.1e-85 317.8 367 48.5
SGA_v2.0_scaffold4G01974 Striga asiatica HOM05D002683 ORTHO05D007757 9.1e-85 317.8 324 53.7
Cfa006719 Carpinus fangiana HOM05D002683 ORTHO05D007541 2.0e-84 316.6 366 49.2
Haze_04041 Corylus avellana HOM05D002683 ORTHO05D007541 2.0e-84 316.6 391 46.5
Atru.BG.140.p Acer truncatum HOM05D002683 ORTHO05D007757 3.5e-84 315.8 366 48.9
Psat6g153200 Pisum sativum HOM05D002683 ORTHO05D007757 3.5e-84 315.8 357 49.6
FAN05G3891 Fragaria x ananassa HOM05D002683 ORTHO05D007757 4.5e-84 315.5 366 47.5
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 5.9e-84 315.1 366 47.3
Ciclev10000978m.g Citrus clementina HOM05D002683 ORTHO05D007757 7.7e-84 314.7 366 48.1
RcHm_v2.0_Chr3g0457511 Rosa chinensis HOM05D002683 ORTHO05D007757 7.7e-84 314.7 366 47.5
TPR.G2640 Trifolium pratense HOM05D002683 ORTHO05D007757 7.7e-84 314.7 367 47.4
MSTRG.20371 Avicennia marina HOM05D002683 ORTHO05D007757 1.3e-83 313.9 366 48.9
PGR083G0299 Punica granatum HOM05D002683 ORTHO05D007757 1.3e-83 313.9 366 47.3
CsaV3_2G007210 Cucumis sativus L. HOM05D002683 ORTHO05D007757 1.7e-83 313.5 362 47.5
Peaxi162Scf00357g00733 Petunia axillaris HOM05D002683 ORTHO05D007757 2.9e-83 312.8 365 48.5
ATR0693G361 Amborella trichopoda HOM05D002683 ORTHO05D007757 1.1e-82 310.8 365 47.4
ClCG02G014790 Citrullus lanatus HOM05D002683 ORTHO05D007757 1.1e-82 310.8 366 46.2
FAN09G2929 Fragaria x ananassa HOM05D002683 ORTHO05D007757 1.1e-82 310.8 366 47.0
QL03p016219 Quercus lobata HOM05D002683 ORTHO05D007757 1.1e-82 310.8 386 46.9
Sabra13G0006000 Salix brachista HOM05D002683 ORTHO05D007757 1.1e-82 310.8 364 48.1
Sc16g0009160 Simmondsia chinensis HOM05D002683 ORTHO05D007757 1.5e-82 310.5 364 47.3
Lalb_Chr06g0167431 Lupinus albus HOM05D002683 ORTHO05D007757 4.2e-82 308.9 367 46.6
Migut.B00939 Erythranthe guttata HOM05D002683 ORTHO05D007757 5.5e-82 308.5 370 47.3
Eucgr.L00254 Eucalyptus grandis HOM05D002683 ORTHO05D007757 5.5e-82 308.5 365 47.9
Duzib128G0271 Durio zibethinus HOM05D002683 ORTHO05D007757 2.1e-81 306.6 346 49.7
Lj5g0023373 Lotus japonicus HOM05D002683 ORTHO05D007757 2.7e-81 306.2 367 47.1
PSO210G3019 Papaver somniferum HOM05D002683 ORTHO05D007757 2.7e-81 306.2 364 47.5
PSO761G0375 Papaver somniferum HOM05D002683 ORTHO05D007757 3.6e-81 305.8 364 47.5
Sopen01g044240 Solanum pennellii HOM05D002683 ORTHO05D007757 3.6e-81 305.8 364 47.3
Eucgr.B01688 Eucalyptus grandis HOM05D002683 ORTHO05D007757 4.7e-81 305.4 357 48.7
SalBow7G3902 Salvia bowleyana HOM05D002683 ORTHO05D007757 6.1e-81 305.1 367 46.9
CAN.G1076.36 Capsicum annuum HOM05D002683 ORTHO05D007757 1.8e-80 303.5 365 46.6
Sed0019928 Sechium edule HOM05D002683 ORTHO05D007757 2.3e-80 303.1 369 45.8
QL03p016490 Quercus lobata HOM05D002683 ORTHO05D007757 2.6e-79 299.7 344 49.7
Ca_10183_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007757 6.3e-78 295.0 306 51.0
BraA08t35381Z Brassica rapa HOM05D002683 ORTHO05D007757 4.1e-77 292.4 364 45.9
Thhalv10007508m.g Eutrema salsugineum HOM05D002683 ORTHO05D007757 7.0e-77 291.6 364 45.6
BcaC07g38490 Brassica carinata HOM05D002683 ORTHO05D007757 9.1e-77 291.2 364 45.6
C08p12600 Brassica napus HOM05D002683 ORTHO05D007757 9.1e-77 291.2 364 45.6
BolC8t48898H Brassica oleracea HOM05D002683 ORTHO05D007757 9.1e-77 291.2 364 45.6
A08p34690 Brassica napus HOM05D002683 ORTHO05D007757 1.6e-76 290.4 364 45.6
Sed0002163 Sechium edule HOM05D002683 ORTHO05D007757 3.5e-76 289.3 366 44.8
Sp1g07910 Schrenkiella parvula HOM05D002683 ORTHO05D007757 4.5e-76 288.9 364 44.5
Hund07304 Selenicereus undatus HOM05D002683 ORTHO05D007757 5.9e-76 288.5 364 45.6
BcaB03g13283 Brassica carinata HOM05D002683 ORTHO05D007757 1.0e-75 287.7 364 44.5
Lsat_1_v5_gn_5_148721 Lactuca sativa HOM05D002683 ORTHO05D007757 1.0e-75 287.7 366 45.6
Aa31LG1G5830 Aethionema arabicum HOM05D002683 ORTHO05D007757 2.3e-75 286.6 364 44.8
MELO3C004172.2 Cucumis melo HOM05D002683 ORTHO05D007757 3.8e-75 285.8 343 46.1
AL1G19790 Arabidopsis lyrata HOM05D002683 ORTHO05D007757 8.6e-75 284.6 364 44.0
CARHR009270 Cardamine hirsuta HOM05D002683 ORTHO05D007757 1.1e-74 284.3 364 44.2
THA.LOC104820580 Tarenaya hassleriana HOM05D002683 ORTHO05D007757 1.5e-74 283.9 363 46.0
vmacro01580 Vaccinium macrocarpon HOM05D002683 ORTHO05D007757 1.5e-74 283.9 343 50.1
AUR62006768 Chenopodium quinoa HOM05D002683 ORTHO05D007757 4.2e-74 282.3 351 45.9
Carub.0001s0864 Capsella rubella HOM05D002683 ORTHO05D007757 4.7e-73 278.9 364 42.9
AUR62000422 Chenopodium quinoa HOM05D002683 ORTHO05D007757 6.1e-73 278.5 366 43.7
unitig_42.g32306 Utricularia gibba HOM05D002683 ORTHO05D007757 4.0e-72 275.8 312 48.4
Solyc01g100740.4 Solanum lycopersicum HOM05D002683 ORTHO05D007757 8.9e-72 274.6 343 45.8
HPP92_010879 Vanilla planifolia HOM05D002683 ORTHO05D007757 9.8e-71 271.2 306 47.7
Nn3g21801 Nelumbo nucifera HOM05D002683 ORTHO05D007757 1.3e-70 270.8 354 45.5
COL.COLO4_05532 Corchorus olitorius HOM05D002683 ORTHO05D007541 1.7e-70 270.4 336 46.1
Os12g0563500 Oryza sativa ssp. japonica HOM05D002683 ORTHO05D007757 2.2e-70 270.0 357 42.3
EL10Ac4g09493 Beta vulgaris HOM05D002683 ORTHO05D007757 1.3e-67 260.8 307 46.9
AT1G09300 Arabidopsis thaliana HOM05D002683 ORTHO05D007757 2.9e-67 259.6 345 43.5
Nitab4.5_0003838g0050 Nicotiana tabacum HOM05D002683 ORTHO05D007757 3.6e-65 252.7 335 44.8
PGSC0003DMG400002792 Solanum tuberosum HOM05D002683 ORTHO05D007757 1.5e-63 247.3 247 53.4
Nitab4.5_0003044g0120 Nicotiana tabacum HOM05D002683 ORTHO05D007757 6.6e-59 231.9 289 45.3
unitig_899.g14747 Utricularia gibba HOM05D002683 ORTHO05D007757 1.9e-58 230.3 271 47.6
Ah.06g196180 Amaranthus hybridus HOM05D002683 ORTHO05D007757 5.6e-58 228.8 318 39.9
Zm00001eb028570 Zea mays HOM05D002683 ORTHO05D007757 6.0e-52 208.8 338 37.0
AagrBONN_evm.TU.Sc2ySwM_117.3324 Anthoceros agrestis HOM05D002683 ORTHO05D007757 1.5e-50 204.1 365 33.4
HPP92_010926 Vanilla planifolia HOM05D002683 ORTHO05D007757 5.6e-50 202.2 266 43.6
Mapoly0027s0075 Marchantia polymorpha HOM05D002683 ORTHO05D007757 4.7e-49 199.1 353 33.7
CDE02G4054 Ceratophyllum demersum HOM05D002683 ORTHO05D007757 1.4e-48 197.6 337 35.9
Pp3c12_9660 Physcomitrium patens HOM05D002683 ORTHO05D007757 1.6e-44 184.1 312 34.3
ECA234G1013 Erigeron canadensis HOM05D002683 ORTHO05D007757 1.1e-42 177.9 138 63.8
SMO119G0363 Selaginella moellendorffii HOM05D002683 ORTHO05D007757 9.5e-42 174.9 355 30.1
Hma1.2p1_0008F-1.1_g005430 Hydrangea macrophylla HOM05D002683 ORTHO05D007757 3.1e-40 169.9 177 55.4
ECA234G3328 Erigeron canadensis HOM05D002683 ORTHO05D007757 1.3e-38 164.5 195 45.6
SEGI_10559 Sequoiadendron giganteum HOM05D002683 ORTHO05D007757 1.4e-21 107.8 139 42.4
Psat4g049720 Pisum sativum HOM05D002683 ORTHO05D007757 1.1e-16 91.7 49 77.6
Rhsim07G0241000 Rhododendron simsii HOM05D002683 ORTHO05D007757 1.8e-16 90.9 88 53.4
MD04G1191800 Malus domestica HOM05D002683 ORTHO05D007757 1.5e-15 87.8 104 47.1
Psat1g077200 Pisum sativum HOM05D002683 ORTHO05D007757 2.0e-15 87.4 49 77.6
SEGI_11666 Sequoiadendron giganteum HOM05D002683 ORTHO05D007757 3.8e-14 83.2 87 49.4
Psat6g200880 Pisum sativum HOM05D002683 ORTHO05D007757 5.1e-11 72.8 41 78.0
PRCOL_00004757 Prasinoderma coloniale HOM05D002683 ORTHO05D007757 5.1e-11 72.8 356 21.6
Cre01.g046150 Chlamydomonas reinhardtii HOM05D002683 ORTHO05D007757 1.5e-10 71.2 382 22.0
Duzib177G1111 Durio zibethinus HOM05D002683 ORTHO05D007757 5.3e-08 62.8 71 49.3
VMungo0251G2911 Vigna mungo HOM05D002683 ORTHO05D007757 1.2e-07 61.6 121 33.9


User provided reference genes

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