Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 8.9e-207 723.4 371 100.0
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 5.8e-89 332.0 260 65.8
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.7e-88 330.5 260 65.8
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.7e-88 330.5 260 65.8
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 6.4e-88 328.6 263 65.0
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 7.0e-87 325.1 262 64.5
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 9.2e-87 324.7 259 63.7
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 6.0e-86 322.0 261 64.0
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.0e-85 319.7 267 63.3
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 3.9e-85 319.3 264 62.1
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.1e-84 317.8 258 63.6
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.5e-84 317.4 260 64.2
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 3.3e-84 316.2 264 62.9
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 4.3e-84 315.8 256 62.5
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 4.3e-84 315.8 260 63.1
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.2e-83 314.3 251 66.1
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.2e-83 314.3 264 62.5
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.6e-83 313.9 256 63.3
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.6e-83 313.9 260 63.8
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 2.1e-83 313.5 260 62.3
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 2.1e-83 313.5 256 64.1
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 3.6e-83 312.8 260 63.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 8.1e-83 311.6 256 63.7
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.3e-82 310.1 260 63.1
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 3.1e-82 309.7 261 64.0
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 4.0e-82 309.3 275 60.0
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 4.0e-82 309.3 255 61.2
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 5.2e-82 308.9 255 63.1
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 8.9e-82 308.1 260 62.3
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 8.9e-82 308.1 263 61.6
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 2.0e-81 307.0 260 62.3
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.6e-81 306.6 261 62.5
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.4e-81 306.2 260 60.0
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 5.8e-81 305.4 260 60.0
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 7.5e-81 305.1 262 62.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 9.8e-81 304.7 261 61.7
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.3e-80 304.3 253 62.5
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.2e-80 303.5 282 58.9
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 2.2e-80 303.5 260 60.0
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.7e-80 302.8 283 58.3
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 6.4e-80 302.0 256 60.2
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 8.3e-80 301.6 256 62.1
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.1e-79 301.2 262 61.8
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.4e-79 300.8 264 59.5
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.4e-79 300.8 264 59.5
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 2.4e-79 300.1 255 62.7
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 4.1e-79 299.3 257 61.1
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 5.4e-79 298.9 259 60.2
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 5.4e-79 298.9 261 60.2
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 7.1e-79 298.5 264 58.7
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 7.1e-79 298.5 264 58.7
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 7.1e-79 298.5 264 58.7
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 7.1e-79 298.5 261 59.4
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.6e-78 297.4 257 60.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 2.1e-78 297.0 259 59.8
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 2.7e-78 296.6 261 60.2
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.5e-78 296.2 253 61.7
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.5e-78 296.2 253 61.7
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.0e-77 294.7 253 61.3
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 3.0e-77 293.1 253 60.9
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 3.9e-77 292.7 265 61.5
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 5.1e-77 292.4 263 57.8
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 6.6e-77 292.0 262 58.4
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 3.3e-76 289.7 259 58.7
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 3.3e-76 289.7 195 72.3
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.6e-75 287.3 237 63.3
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.0e-74 282.7 185 73.0
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 5.2e-74 282.3 191 70.7
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 4.4e-73 279.3 259 57.1
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 4.4e-73 279.3 227 63.0
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 3.8e-72 276.2 319 48.6
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.1e-71 274.6 184 73.9
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 1.9e-71 273.9 250 58.4
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 7.1e-71 271.9 261 57.5
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 4.6e-70 269.2 188 68.1
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 7.8e-70 268.5 229 59.4
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.0e-69 268.1 227 61.2
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 1.7e-69 267.3 192 67.2
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 6.6e-69 265.4 186 69.4
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 1.9e-68 263.8 193 67.9
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 3.1e-66 256.5 196 67.3
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.0e-66 256.1 261 54.4
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.3e-64 251.1 253 54.2
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 8.4e-64 248.4 165 72.7
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.4e-63 247.7 299 48.2
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.2e-62 244.6 224 58.9
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 3.9e-61 239.6 241 52.7
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 1.1e-60 238.0 253 50.6
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.1e-59 233.8 253 49.4
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.8e-58 230.7 161 68.9
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.1e-58 229.9 254 49.2
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 1.2e-57 228.0 175 63.4
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 5.1e-53 212.6 189 57.1
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.9e-52 210.7 251 47.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.9e-52 210.7 255 48.6
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.8e-50 204.1 165 61.8
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 9.0e-50 201.8 192 54.2
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 5.5e-47 192.6 258 47.3
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.2e-41 174.9 196 50.5
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 5.8e-41 172.6 124 67.7
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.5e-36 157.9 126 61.1
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.3e-20 103.6 113 53.1
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-16 91.7 119 42.0
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 5.0e-16 89.7 114 47.4
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.4e-15 88.2 101 53.5
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 4.2e-15 86.7 66 65.2
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.7e-14 84.0 100 48.0
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.0e-13 80.5 70 52.9
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 5.2e-13 79.7 69 53.6
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-08 65.1 78 46.2
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 1.7e-08 64.7 192 33.3
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 8.0e-06 55.8 242 27.7


User provided reference genes

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