Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A261T39 Lonicera japonica HOM05D006764 ORTHO05D008516 2.4e-116 422.2 208 100.0
Dinv01845 Davidia involucrata HOM05D006764 ORTHO05D008516 8.0e-56 221.1 247 54.7
Duzib132G0537 Durio zibethinus HOM05D006764 ORTHO05D008516 1.6e-48 196.8 207 53.6
Actinidia39013 Actinidia chinensis HOM05D006764 ORTHO05D008516 1.8e-47 193.4 240 48.8
SGA_v2.0_scaffold304G47898 Striga asiatica HOM05D006764 ORTHO05D008516 3.1e-47 192.6 249 48.2
Cc02_g22970 Coffea canephora HOM05D006764 ORTHO05D008516 2.0e-46 189.9 243 49.0
Migut.B00802 Erythranthe guttata HOM05D006764 ORTHO05D008516 2.6e-46 189.5 198 57.6
HanXRQChr10g0294521 Helianthus annuus HOM05D006764 ORTHO05D008516 5.8e-46 188.3 249 47.4
ECA234G3405 Erigeron canadensis HOM05D006764 ORTHO05D008516 9.8e-46 187.6 246 45.9
vmacro01728 Vaccinium macrocarpon HOM05D006764 ORTHO05D008516 2.9e-45 186.0 235 47.2
Potri.004G222300 Populus trichocarpa HOM05D006764 ORTHO05D008516 3.7e-45 185.7 247 44.5
QL02p099872 Quercus lobata HOM05D006764 ORTHO05D008516 4.9e-45 185.3 247 46.2
Thecc.02G025400 Theobroma cacao HOM05D006764 ORTHO05D008516 8.3e-45 184.5 247 46.2
TAR628G0031 Trochodendron aralioides HOM05D006764 ORTHO05D008516 1.9e-44 183.3 242 46.7
PGR042G2798 Punica granatum HOM05D006764 ORTHO05D008516 5.4e-44 181.8 237 47.7
Atru.chr6.751 Acer truncatum HOM05D006764 ORTHO05D008516 7.0e-44 181.4 245 47.3
GSVIVG01023281001 Vitis vinifera HOM05D006764 ORTHO05D008516 6.0e-43 178.3 242 46.7
CiPaw.05G051400 Carya illinoinensis HOM05D006764 ORTHO05D008516 7.8e-43 177.9 247 46.2
Rhsim11G0125600 Rhododendron simsii HOM05D006764 ORTHO05D008516 1.0e-42 177.6 235 46.4
MD08G1240100 Malus domestica HOM05D006764 ORTHO05D008516 1.3e-42 177.2 247 45.7
Prupe.1G576600 Prunus persica HOM05D006764 ORTHO05D008516 1.3e-42 177.2 247 44.9
CSS0013576 Camellia sinensis var. sinensis HOM05D006764 ORTHO05D008516 1.7e-42 176.8 247 49.0
Gohir.A04G130100 Gossypium hirsutum HOM05D006764 ORTHO05D008516 3.9e-42 175.6 247 43.3
Manes.07G022500 Manihot esculenta HOM05D006764 ORTHO05D008516 8.6e-42 174.5 248 44.8
Gorai.012G166600 Gossypium raimondii HOM05D006764 ORTHO05D008516 2.5e-41 172.9 247 42.9
Gohir.D04G175300 Gossypium hirsutum HOM05D006764 ORTHO05D008516 7.3e-41 171.4 247 42.9
Oeu023412.2 Olea europaea HOM05D006764 ORTHO05D008516 9.5e-41 171.0 246 45.9
RcHm_v2.0_Chr7g0220831 Rosa chinensis HOM05D006764 ORTHO05D008516 1.1e-39 167.5 240 45.0
MD15G1432200 Malus domestica HOM05D006764 ORTHO05D008516 1.8e-39 166.8 247 44.1
Solyc10g044910.2 Solanum lycopersicum HOM05D006764 ORTHO05D008516 2.3e-39 166.4 237 43.9
Sopen10g013910 Solanum pennellii HOM05D006764 ORTHO05D008516 6.8e-39 164.9 237 43.0
FvH4_5g28680 Fragaria vesca HOM05D006764 ORTHO05D008516 1.5e-38 163.7 237 44.3
Sc16g0001680 Simmondsia chinensis HOM05D006764 ORTHO05D008516 2.0e-38 163.3 240 41.7
TPR.G2075 Trifolium pratense HOM05D006764 ORTHO05D008516 2.6e-38 162.9 234 42.3
Sabra01G0168400 Salix brachista HOM05D006764 ORTHO05D008516 4.4e-38 162.2 225 44.9
EL10Ac6g14065 Beta vulgaris HOM05D006764 ORTHO05D008516 7.5e-38 161.4 234 44.4
CANSAT54G1059 Cannabis sativa HOM05D006764 ORTHO05D008516 1.3e-37 160.6 247 42.1
Medtr2g006100 Medicago truncatula HOM05D006764 ORTHO05D008516 2.2e-37 159.8 234 44.4
Carub.0006s2639 Capsella rubella HOM05D006764 ORTHO05D008516 6.4e-37 158.3 222 45.5
THA.LOC104807147 Tarenaya hassleriana HOM05D006764 ORTHO05D008516 6.4e-37 158.3 247 42.1
Lj6g0021331 Lotus japonicus HOM05D006764 ORTHO05D008516 1.1e-36 157.5 232 43.1
Nitab4.5_0000667g0120 Nicotiana tabacum HOM05D006764 ORTHO05D008516 1.4e-36 157.1 242 43.0
Glyma.16G004200 Glycine max HOM05D006764 ORTHO05D008516 1.9e-36 156.8 234 42.3
VMungo0540G1274 Vigna mungo HOM05D006764 ORTHO05D008516 3.2e-36 156.0 234 41.9
Ciclev10001742m.g Citrus clementina HOM05D006764 ORTHO05D008516 5.4e-36 155.2 245 43.7
AL6G41260 Arabidopsis lyrata HOM05D006764 ORTHO05D008516 7.1e-36 154.8 234 44.0
Glyma.12G168200 Glycine max HOM05D006764 ORTHO05D008516 7.1e-36 154.8 234 41.5
BcaC04g20869 Brassica carinata HOM05D006764 ORTHO05D008516 9.2e-36 154.5 231 43.3
C09p38380 Brassica napus HOM05D006764 ORTHO05D008516 9.2e-36 154.5 231 43.3
BolC9t56687H Brassica oleracea HOM05D006764 ORTHO05D008516 9.2e-36 154.5 231 43.3
Psat1g221840 Pisum sativum HOM05D006764 ORTHO05D008516 9.2e-36 154.5 240 40.4
BcaB01g01263 Brassica carinata HOM05D006764 ORTHO05D008516 1.2e-35 154.1 231 43.7
AUR62014213 Chenopodium quinoa HOM05D006764 ORTHO05D008516 1.2e-35 154.1 190 48.4
MELO3C011834.2 Cucumis melo HOM05D006764 ORTHO05D008516 4.6e-35 152.1 247 39.7
arahy.Tifrunner.gnm1.ann1.0E87YT Arachis hypogaea HOM05D006764 ORTHO05D008516 1.0e-34 151.0 236 41.5
arahy.Tifrunner.gnm1.ann1.FMX4TW Arachis hypogaea HOM05D006764 ORTHO05D008516 1.3e-34 150.6 236 41.5
Peaxi162Scf00002g00261 Petunia axillaris HOM05D006764 ORTHO05D008516 1.3e-34 150.6 208 46.2
Phvul.006G217900 Phaseolus vulgaris HOM05D006764 ORTHO05D008516 1.7e-34 150.2 234 41.9
AT4G06676 Arabidopsis thaliana HOM05D006764 ORTHO05D008516 2.3e-34 149.8 234 43.6
A09p30490 Brassica napus HOM05D006764 ORTHO05D008516 2.3e-34 149.8 232 42.7
BraA09t38619Z Brassica rapa HOM05D006764 ORTHO05D008516 2.3e-34 149.8 232 42.7
CARHR260060 Cardamine hirsuta HOM05D006764 ORTHO05D008516 3.9e-34 149.1 231 43.7
PSO170G2545 Papaver somniferum HOM05D006764 ORTHO05D008516 1.1e-33 147.5 237 40.9
Aqoxy6G00131 Aquilegia oxysepala HOM05D006764 ORTHO05D008516 1.9e-33 146.7 240 39.2
ClCG11G013370 Citrullus lanatus HOM05D006764 ORTHO05D008516 2.5e-33 146.4 247 38.5
Eucgr.G00355 Eucalyptus grandis HOM05D006764 ORTHO05D008516 2.5e-33 146.4 240 40.0
DCAR_029270 Daucus carota HOM05D006764 ORTHO05D008516 7.3e-33 144.8 215 44.7
Lalb_Chr18g0061021 Lupinus albus HOM05D006764 ORTHO05D008516 1.6e-32 143.7 214 42.1
Nn5g27693 Nelumbo nucifera HOM05D006764 ORTHO05D008516 1.1e-31 141.0 233 41.6
TWI59G0639 Tripterygium wilfordii HOM05D006764 ORTHO05D008516 1.1e-31 141.0 234 41.0
Aa31LG3G14080 Aethionema arabicum HOM05D006764 ORTHO05D008516 1.8e-31 140.2 256 39.1
CsaV3_5G029880 Cucumis sativus L. HOM05D006764 ORTHO05D008516 1.8e-31 140.2 241 38.6
COL.COLO4_17757 Corchorus olitorius HOM05D006764 ORTHO05D008516 4.4e-30 135.6 216 42.1
Ca_00050_v3 Cicer arietinum L. HOM05D006764 ORTHO05D008516 5.8e-30 135.2 205 42.0
Nitab4.5_0008098g0020 Nicotiana tabacum HOM05D006764 ORTHO05D008516 5.8e-30 135.2 202 42.6
FAN13G1303 Fragaria x ananassa HOM05D006764 ORTHO05D008516 9.9e-30 134.4 237 38.8
AUR62042713 Chenopodium quinoa HOM05D006764 ORTHO05D008516 1.3e-29 134.0 207 43.5
Thhalv10028801m.g Eutrema salsugineum HOM05D006764 ORTHO05D008516 1.1e-28 131.0 211 43.6
HPP92_009268 Vanilla planifolia HOM05D006764 ORTHO05D008516 1.6e-27 127.1 240 36.7
Cfa005482 Carpinus fangiana HOM05D006764 ORTHO05D008516 3.5e-27 125.9 106 60.4
FAN18G3575 Fragaria x ananassa HOM05D006764 ORTHO05D008516 1.3e-26 124.0 233 36.9
ATR0709G017 Amborella trichopoda HOM05D006764 ORTHO05D008516 3.0e-26 122.9 238 35.3
Haze_01822 Corylus avellana HOM05D006764 ORTHO05D008516 3.9e-26 122.5 106 58.5
CAN.G1108.5 Capsicum annuum HOM05D006764 ORTHO05D008516 4.3e-25 119.0 104 58.7
FAN08G1175 Fragaria x ananassa HOM05D006764 ORTHO05D008516 4.3e-25 119.0 248 34.7
unitig_748.g8283 Utricularia gibba HOM05D006764 ORTHO05D008516 2.8e-24 116.3 237 38.0
MBI17_g21477_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 3.6e-24 115.9 233 36.1
Hund12938 Selenicereus undatus HOM05D006764 ORTHO05D008516 2.6e-22 109.8 104 54.8
Lsat_1_v5_gn_5_103781 Lactuca sativa HOM05D006764 ORTHO05D008516 4.4e-22 109.0 110 56.4
Sp6g10710 Schrenkiella parvula HOM05D006764 ORTHO05D008516 2.2e-21 106.7 189 40.2
SalBow7G3863 Salvia bowleyana HOM05D006764 ORTHO05D008516 6.4e-21 105.1 100 58.0
AagrBONN_evm.TU.Sc2ySwM_228.3284 Anthoceros agrestis HOM05D006764 ORTHO05D008516 6.0e-19 98.6 232 31.9
Cpa.g.sc30.47 Carica papaya HOM05D006764 ORTHO05D008516 6.0e-19 98.6 84 61.9
SEGI_07291 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 7.8e-19 98.2 245 35.1
PSO017G2259 Papaver somniferum HOM05D006764 ORTHO05D008516 5.1e-18 95.5 104 51.0
Zm00001eb082660 Zea mays HOM05D006764 ORTHO05D008516 5.1e-18 95.5 234 34.6
Pp3c15_15530 Physcomitrium patens HOM05D006764 ORTHO05D008516 1.4e-15 87.4 222 27.5
Mapoly0025s0102 Marchantia polymorpha HOM05D006764 ORTHO05D008516 4.0e-15 85.9 245 27.3
SHI04828 Sapria himalayana HOM05D006764 ORTHO05D008516 6.9e-15 85.1 106 48.1
Sed0008550 Sechium edule HOM05D000755 ORTHO05D000642 4.5e-14 82.4 119 37.0
Hund29476 Selenicereus undatus HOM05D006764 ORTHO05D008516 1.9e-12 77.0 81 50.6
Hund29477 Selenicereus undatus HOM05D006764 ORTHO05D008516 1.9e-12 77.0 81 50.6
SMO367G0572 Selaginella moellendorffii HOM05D006764 ORTHO05D008516 3.5e-11 72.8 220 28.6
SEGI_28644 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 6.7e-10 68.6 67 52.2
FAN04G0462 Fragaria x ananassa HOM05D006764 ORTHO05D008516 5.6e-09 65.5 30 90.0
MBI17_g13541_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 1.6e-08 63.9 91 41.8
CBR_g19125 Chara braunii HOM05D006764 ORTHO05D008516 8.1e-08 61.6 121 31.4


User provided reference genes

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