Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A253T35 Lonicera japonica HOM05D003697 ORTHO05D005452 0.0e+00 1236.9 621 100.0
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 1.7e-250 869.4 610 71.8
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 1.0e-247 860.1 608 72.9
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 5.6e-246 854.4 632 69.6
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 2.1e-245 852.4 608 71.5
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 6.2e-245 850.9 611 71.5
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 2.6e-243 845.5 610 70.5
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 3.4e-243 845.1 607 72.0
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 4.9e-242 841.3 611 70.4
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 2.4e-241 839.0 611 70.9
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 1.2e-240 836.6 627 68.7
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 1.5e-238 829.7 625 67.4
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 1.9e-238 829.3 633 67.0
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 3.3e-238 828.6 601 70.7
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 5.2e-236 821.2 609 69.0
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 6.8e-236 820.8 610 70.2
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 2.0e-235 819.3 610 68.4
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 3.8e-234 815.1 633 67.3
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 8.4e-234 813.9 633 66.5
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 1.4e-233 813.1 663 64.6
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 1.9e-233 812.8 608 68.3
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 2.4e-233 812.4 612 68.1
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 5.4e-233 811.2 633 66.4
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 5.4e-233 811.2 636 66.2
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 7.1e-233 810.8 634 65.3
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 9.2e-233 810.4 633 66.0
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 9.2e-233 810.4 637 66.6
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 2.1e-232 809.3 604 68.4
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 3.5e-232 808.5 608 67.4
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 3.9e-231 805.1 608 67.8
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 1.9e-230 802.7 623 66.8
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 1.2e-229 800.0 597 68.2
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 2.8e-229 798.9 610 67.7
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 2.8e-229 798.9 619 66.1
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 3.6e-229 798.5 646 64.6
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 2.4e-228 795.8 621 67.0
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 2.4e-228 795.8 614 67.6
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 3.1e-228 795.4 634 64.2
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 1.5e-227 793.1 598 66.9
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 1.5e-227 793.1 611 66.1
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 2.6e-227 792.3 636 65.9
Gorai.008G028000 Gossypium raimondii HOM05D003697 ORTHO05D005452 4.4e-227 791.6 611 66.6
Nitab4.5_0000816g0140 Nicotiana tabacum HOM05D003697 ORTHO05D005452 5.8e-227 791.2 639 65.7
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 9.9e-227 790.4 607 67.5
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 1.3e-226 790.0 640 64.2
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 1.7e-226 789.6 607 67.5
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 1.1e-225 786.9 579 69.3
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 3.2e-225 785.4 602 66.1
ClCG05G009570 Citrullus lanatus HOM05D003697 ORTHO05D005452 1.0e-223 780.4 579 69.1
CAN.G798.12 Capsicum annuum HOM05D003697 ORTHO05D005452 1.3e-223 780.0 635 65.4
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 1.7e-223 779.6 602 65.8
FAN13G2190 Fragaria x ananassa HOM05D003697 ORTHO05D005452 5.1e-223 778.1 616 66.2
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 7.3e-222 774.2 613 66.1
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 9.6e-222 773.9 607 67.1
Sc02g0002740 Simmondsia chinensis HOM05D003697 ORTHO05D005452 4.8e-221 771.5 593 67.3
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 1.4e-220 770.0 574 68.3
Cc02_g22690 Coffea canephora HOM05D003697 ORTHO05D005452 5.3e-220 768.1 556 70.0
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 5.3e-220 768.1 637 64.2
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 1.2e-219 766.9 569 68.5
ECA233G0288 Erigeron canadensis HOM05D003697 ORTHO05D005452 3.8e-218 761.9 574 68.1
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 4.9e-218 761.5 598 64.7
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 1.6e-216 756.5 732 57.9
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 1.0e-215 753.8 623 62.4
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 1.3e-215 753.4 623 63.2
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 8.7e-215 750.7 570 66.3
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 3.3e-214 748.8 628 61.0
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 8.1e-213 744.2 592 64.9
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 5.3e-212 741.5 627 61.2
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 9.0e-212 740.7 598 62.5
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 2.0e-211 739.6 599 62.8
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 2.6e-211 739.2 623 60.2
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 7.6e-211 737.6 700 57.6
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 1.7e-210 736.5 601 62.1
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 8.4e-210 734.2 589 62.3
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 1.1e-209 733.8 620 61.0
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 3.2e-209 732.3 591 62.6
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 7.1e-209 731.1 604 61.3
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 9.3e-209 730.7 573 63.7
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 2.1e-208 729.6 603 61.7
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 2.7e-208 729.2 603 61.4
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 4.6e-208 728.4 588 62.2
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 4.6e-208 728.4 610 64.3
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 1.8e-207 726.5 612 60.5
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 3.0e-207 725.7 602 61.1
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 1.1e-206 723.8 598 61.7
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 1.5e-206 723.4 601 61.4
Psat1g220520 Pisum sativum HOM05D003697 ORTHO05D005452 7.4e-206 721.1 622 60.5
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 1.6e-205 719.9 657 58.6
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 3.7e-205 718.8 625 59.8
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 1.8e-204 716.5 601 61.9
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 2.4e-204 716.1 588 62.6
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 5.8e-203 711.4 607 62.4
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 4.9e-202 708.4 623 59.2
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 5.5e-201 704.9 617 60.8
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 6.0e-200 701.4 617 60.5
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 1.6e-197 693.3 644 58.5
SHI16668 Sapria himalayana HOM05D003697 ORTHO05D005452 1.4e-196 690.3 606 59.1
Os02g0664100 Oryza sativa ssp. japonica HOM05D003697 ORTHO05D005452 2.9e-194 682.6 538 64.5
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 1.9e-193 679.9 626 58.1
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 1.8e-183 646.7 612 53.8
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 3.9e-183 645.6 604 59.3
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 7.7e-179 631.3 647 53.6
Pp3c3_14060 Physcomitrium patens HOM05D003697 ORTHO05D005452 1.6e-155 553.9 565 50.4
Atru.chr6.584 Acer truncatum HOM05D003697 ORTHO05D005452 4.2e-153 545.8 407 69.0
SMO276G0030 Selaginella moellendorffii HOM05D003697 ORTHO05D005452 2.2e-149 533.5 557 51.3
unitig_749.g14126 Utricularia gibba HOM05D003697 ORTHO05D005452 4.9e-141 505.8 620 47.3
Mapoly0156s0022 Marchantia polymorpha HOM05D003697 ORTHO05D005452 3.5e-139 499.6 597 45.6
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 7.8e-139 498.4 330 74.5
CBR_g48619 Chara braunii HOM05D003697 ORTHO05D005452 1.4e-124 451.1 603 42.5
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 4.6e-115 419.5 271 75.6
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis HOM05D003697 ORTHO05D005452 2.9e-109 400.2 499 44.3
Duzib132G0509 Durio zibethinus HOM05D003697 ORTHO05D005452 3.2e-108 396.7 344 60.5
Lalb_Chr20g0123551 Lupinus albus HOM05D003697 ORTHO05D005452 1.6e-107 394.4 290 68.6
Gohir.D12G027532 Gossypium hirsutum HOM05D003697 ORTHO05D005452 2.9e-85 320.5 217 70.5
MCO01G725 Micromonas commoda HOM05D003697 ORTHO05D005452 2.2e-64 251.1 600 27.7
PRCOL_00004479 Prasinoderma coloniale HOM05D003697 ORTHO05D005452 2.6e-62 244.2 613 31.2
Cre05.g233303 Chlamydomonas reinhardtii HOM05D003697 ORTHO05D005452 2.6e-54 217.6 656 25.8
Cpa.g.sc30.5 Carica papaya HOM05D003697 ORTHO05D005452 5.2e-50 203.4 117 83.8
BcaB03g14881 Brassica carinata HOM05D003697 ORTHO05D005452 3.1e-47 194.1 144 63.2
Psat7g198520 Pisum sativum HOM05D003697 ORTHO05D005452 4.2e-36 157.1 146 53.4
Cpa.g.sc30.4 Carica papaya HOM05D003697 ORTHO05D005452 9.5e-36 156.0 105 68.6
Psat7g198480 Pisum sativum HOM05D003697 ORTHO05D005452 6.1e-35 153.3 129 57.4
Dinv19381 Davidia involucrata HOM05D003697 ORTHO05D005452 2.1e-27 128.3 65 86.2
VMungo0251G1240 Vigna mungo HOM05D000087 ORTHO05D012327 1.5e-17 95.5 59 69.5
Cfa024915 Carpinus fangiana HOM05D003697 ORTHO05D005452 1.3e-16 92.4 297 26.3
Lalb_Chr20g0123541 Lupinus albus HOM05D003697 ORTHO05D005452 8.6e-13 79.7 61 55.7
SEGI_14626 Sequoiadendron giganteum HOM05D003697 ORTHO05D012276 1.7e-08 65.5 42 71.4
SEGI_31193 Sequoiadendron giganteum HOM05D000279 ORTHO05D012276 1.7e-08 65.5 42 71.4
DCAR_010218 Daucus carota HOM05D003697 ORTHO05D043544 2.9e-08 64.7 62 58.1
Lalb_Chr23g0273611 Lupinus albus HOM05D003697 ORTHO05D005452 6.4e-08 63.5 47 63.8
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 1.4e-07 62.4 80 41.2
Cpa.g.c26548.1 Carica papaya HOM05D003697 ORTHO05D043544 5.4e-07 60.5 57 54.4


User provided reference genes

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