Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A237T48 Lonicera japonica HOM05D000385 ORTHO05D000269 6.6e-81 303.9 146 100.0
CSS0021485 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 7.0e-14 81.3 147 32.0
Potri.003G103200 Populus trichocarpa HOM05D000385 ORTHO05D000269 7.0e-14 81.3 170 28.2
CSS0013726 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 1.0e-12 77.4 173 29.5
CSS0041123 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 5.0e-12 75.1 168 28.0
Potri.001G130700 Populus trichocarpa HOM05D000385 ORTHO05D000269 8.5e-12 74.3 170 27.6
COL.COLO4_27707 Corchorus olitorius HOM05D000385 ORTHO05D000269 1.1e-11 73.9 181 25.4
GSVIVG01037806001 Vitis vinifera HOM05D000385 ORTHO05D000269 1.1e-11 73.9 173 27.2
Sabra03G0070400 Salix brachista HOM05D000385 ORTHO05D000269 7.2e-11 71.2 170 25.3
Ciclev10002157m.g Citrus clementina HOM05D000385 ORTHO05D000269 1.2e-10 70.5 146 30.1
GSVIVG01037804001 Vitis vinifera HOM05D000385 ORTHO05D000269 1.2e-10 70.5 173 26.6
Lj6A119G5 Lonicera japonica HOM05D000385 ORTHO05D000269 1.6e-10 70.1 186 24.7
GSVIVG01037800001 Vitis vinifera HOM05D000385 ORTHO05D000269 2.7e-10 69.3 173 26.6
Dinv09547 Davidia involucrata HOM05D000385 ORTHO05D000269 8.0e-10 67.8 171 25.7
Duzib133G0288 Durio zibethinus HOM05D000385 ORTHO05D000269 8.0e-10 67.8 190 25.3
HanXRQChr01g0022021 Helianthus annuus HOM05D000385 ORTHO05D000269 1.8e-09 66.6 175 28.6
Sabra17G0041300 Salix brachista HOM05D000385 ORTHO05D000269 1.8e-09 66.6 171 26.9
Sopen01g021720 Solanum pennellii HOM05D000385 ORTHO05D000269 2.3e-09 66.2 140 26.4
MELO3C017644.2 Cucumis melo HOM05D000385 ORTHO05D000269 3.0e-09 65.9 186 23.1
Lsat_1_v5_gn_9_112741 Lactuca sativa HOM05D000385 ORTHO05D000269 3.0e-09 65.9 152 27.6
Nn2g12416 Nelumbo nucifera HOM05D000385 ORTHO05D000269 4.0e-09 65.5 171 26.3
CsaV3_4G004220 Cucumis sativus L. HOM05D000385 ORTHO05D000269 5.2e-09 65.1 183 24.0
Dinv15825 Davidia involucrata HOM05D000385 ORTHO05D000269 5.2e-09 65.1 129 31.8
Aqoxy2G03807 Aquilegia oxysepala HOM05D000385 ORTHO05D000269 6.7e-09 64.7 185 23.2
Dinv29524 Davidia involucrata HOM05D000385 ORTHO05D000269 6.7e-09 64.7 175 25.7
Potri.017G049200 Populus trichocarpa HOM05D000385 ORTHO05D000269 6.7e-09 64.7 169 26.6
Potri.008G005300 Populus trichocarpa HOM05D000385 ORTHO05D000269 8.8e-09 64.3 175 26.3
ClCG07G017000 Citrullus lanatus HOM05D000385 ORTHO05D000269 1.2e-08 63.9 171 24.6
Glyma.03G116300 Glycine max HOM05D000385 ORTHO05D000269 1.2e-08 63.9 171 28.1
Potri.017G049100 Populus trichocarpa HOM05D000385 ORTHO05D000269 1.5e-08 63.5 184 24.5
Migut.A00991 Erythranthe guttata HOM05D000385 ORTHO05D000269 2.0e-08 63.2 173 24.9
vmacro01952 Vaccinium macrocarpon HOM05D000385 ORTHO05D000269 2.0e-08 63.2 137 29.2
Dinv15829 Davidia involucrata HOM05D000385 ORTHO05D000269 2.6e-08 62.8 171 24.0
FAN06G4299 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.6e-08 62.8 171 25.7
Hma1.2p1_2816F.1_g328990 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 2.6e-08 62.8 139 28.1
Dinv29520 Davidia involucrata HOM05D000385 ORTHO05D000269 3.3e-08 62.4 173 24.9
Sabra17G0035200 Salix brachista HOM05D000385 ORTHO05D000269 3.3e-08 62.4 195 24.1
COL.COLO4_06133 Corchorus olitorius HOM05D000385 ORTHO05D000269 4.4e-08 62.0 149 27.5
DCAR_030428 Daucus carota HOM05D000385 ORTHO05D000269 4.4e-08 62.0 174 26.4
PGR031G2908 Punica granatum HOM05D000385 ORTHO05D000269 4.4e-08 62.0 194 26.8
Sabra01G0101100 Salix brachista HOM05D000385 ORTHO05D000269 4.4e-08 62.0 164 30.5
Thecc.01G389100 Theobroma cacao HOM05D000385 ORTHO05D000269 4.4e-08 62.0 173 24.9
TPR.G28929 Trifolium pratense HOM05D000385 ORTHO05D000269 4.4e-08 62.0 173 24.3
Aa31LG1G11420 Aethionema arabicum HOM05D000385 ORTHO05D000269 5.7e-08 61.6 166 24.1
CSS0018544 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 5.7e-08 61.6 172 25.6
CANSAT54G0794 Cannabis sativa HOM05D000385 ORTHO05D000269 5.7e-08 61.6 182 23.6
Nn3g16129 Nelumbo nucifera HOM05D000385 ORTHO05D000269 5.7e-08 61.6 180 25.0
Dinv15824 Davidia involucrata HOM05D000385 ORTHO05D000269 7.5e-08 61.2 189 23.8
Duzib133G1299 Durio zibethinus HOM05D000385 ORTHO05D000269 7.5e-08 61.2 168 27.4
Lj9C332G3 Lonicera japonica HOM05D000385 ORTHO05D000269 7.5e-08 61.2 147 29.3
Actinidia32238 Actinidia chinensis HOM05D000385 ORTHO05D000269 9.7e-08 60.8 192 24.5
MELO3C021236.2 Cucumis melo HOM05D000385 ORTHO05D000269 9.7e-08 60.8 173 26.6
Nn3g16128 Nelumbo nucifera HOM05D000385 ORTHO05D000269 9.7e-08 60.8 186 25.3
Nn3g16130 Nelumbo nucifera HOM05D000385 ORTHO05D000269 9.7e-08 60.8 186 25.3
Nn3g19436 Nelumbo nucifera HOM05D000385 ORTHO05D000269 9.7e-08 60.8 186 25.3
CARHR000080 Cardamine hirsuta HOM05D000385 ORTHO05D000269 1.3e-07 60.5 123 32.5
Nn3g19437 Nelumbo nucifera HOM05D000385 ORTHO05D000269 1.3e-07 60.5 180 24.4
COL.COLO4_12442 Corchorus olitorius HOM05D000385 ORTHO05D000269 1.7e-07 60.1 173 25.4
Gohir.D08G069000 Gossypium hirsutum HOM05D000385 ORTHO05D000269 1.7e-07 60.1 176 27.8
Gorai.004G072400 Gossypium raimondii HOM05D000385 ORTHO05D000269 1.7e-07 60.1 176 27.8
Hma1.2p1_2342F.1_g320360 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 1.7e-07 60.1 139 27.3
PGR031G2649 Punica granatum HOM05D000385 ORTHO05D000269 1.7e-07 60.1 170 27.1
SalBow6G4222 Salvia bowleyana HOM05D000385 ORTHO05D000269 1.7e-07 60.1 159 27.0
Thecc.04G006300 Theobroma cacao HOM05D000385 ORTHO05D000269 1.7e-07 60.1 169 26.6
BcaB02g07858 Brassica carinata HOM05D000385 ORTHO05D000269 2.2e-07 59.7 169 24.9
CSS0012911 Camellia sinensis var. sinensis HOM05D002061 ORTHO05D000269 2.2e-07 59.7 179 25.1
Nitab4.5_0004390g0040 Nicotiana tabacum HOM05D000385 ORTHO05D000269 2.2e-07 59.7 114 28.9
Ciclev10001906m.g Citrus clementina HOM05D000385 ORTHO05D000269 2.8e-07 59.3 174 24.1
Migut.A01077 Erythranthe guttata HOM05D000385 ORTHO05D000269 2.8e-07 59.3 173 24.9
Lj3g0023119 Lotus japonicus HOM05D000385 ORTHO05D000269 2.8e-07 59.3 172 24.4
Nn3g19435 Nelumbo nucifera HOM05D000385 ORTHO05D000269 2.8e-07 59.3 180 24.4
PSO017G1768 Papaver somniferum HOM05D000385 ORTHO05D000269 2.8e-07 59.3 179 27.4
QL02p027073 Quercus lobata HOM05D000385 ORTHO05D000269 2.8e-07 59.3 127 30.7
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 2.8e-07 59.3 52 50.0
MD16G1132700 Malus domestica HOM05D000385 ORTHO05D000269 3.7e-07 58.9 145 29.7
CSS0045819 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 4.8e-07 58.5 175 25.7
CsaV3_6G000180 Cucumis sativus L. HOM05D000385 ORTHO05D000269 4.8e-07 58.5 173 26.6
FvH4_7g09650 Fragaria vesca HOM05D000385 ORTHO05D000269 4.8e-07 58.5 171 24.6
FAN06G4707 Fragaria x ananassa HOM05D000385 ORTHO05D000269 4.8e-07 58.5 171 24.6
HanXRQChr03g0071921 Helianthus annuus HOM05D000385 ORTHO05D000269 4.8e-07 58.5 164 24.4
Lj9A330G7 Lonicera japonica HOM05D000385 ORTHO05D000269 4.8e-07 58.5 177 23.7
RcHm_v2.0_Chr4g0426981 Rosa chinensis HOM05D000385 ORTHO05D000269 4.8e-07 58.5 84 34.5
VMungo1215G0555 Vigna mungo HOM05D000385 ORTHO05D000269 4.8e-07 58.5 173 24.3
Cpa.g.sc271.7 Carica papaya HOM05D000385 ORTHO05D000269 6.3e-07 58.2 169 25.4
ECA240G3344 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.3e-07 58.2 131 27.5
Potri.008G005650 Populus trichocarpa HOM05D000385 ORTHO05D000269 6.3e-07 58.2 185 24.3
PGR031G1755 Punica granatum HOM05D000385 ORTHO05D000269 6.3e-07 58.2 52 50.0
vmacro02478 Vaccinium macrocarpon HOM05D000385 ORTHO05D000269 6.3e-07 58.2 171 25.1
AL2G28820 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 8.2e-07 57.8 138 29.0
Cpa.g.sc997.4 Carica papaya HOM05D000385 ORTHO05D000269 8.2e-07 57.8 190 25.3
Duzib251G0380 Durio zibethinus HOM05D000385 ORTHO05D000269 8.2e-07 57.8 68 41.2
Gohir.A08G059800 Gossypium hirsutum HOM05D000385 ORTHO05D000269 8.2e-07 57.8 176 26.7
Oeu012213.1 Olea europaea HOM05D000385 ORTHO05D000269 8.2e-07 57.8 170 25.9
Prupe.1G107500 Prunus persica HOM05D000385 ORTHO05D000269 8.2e-07 57.8 191 24.1
TWI59G0479 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 8.2e-07 57.8 172 27.3
AL2G28830 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 1.1e-06 57.4 160 28.1
Cfa013582 Carpinus fangiana HOM05D000385 ORTHO05D000269 1.1e-06 57.4 191 23.0
COL.COLO4_14171 Corchorus olitorius HOM05D000385 ORTHO05D000269 1.1e-06 57.4 166 27.1
PSO063G2158 Papaver somniferum HOM05D000385 ORTHO05D000269 1.1e-06 57.4 175 26.9
SGA_v2.0_scaffold104G30238 Striga asiatica HOM05D000385 ORTHO05D000269 1.1e-06 57.4 171 24.6
CARHR092700 Cardamine hirsuta HOM05D000385 ORTHO05D000269 1.4e-06 57.0 170 23.5
Oeu012214.1 Olea europaea HOM05D000385 ORTHO05D000269 1.4e-06 57.0 169 24.3
Prupe.1G107400 Prunus persica HOM05D000385 ORTHO05D000269 1.4e-06 57.0 87 34.5
THA.LOC104817003 Tarenaya hassleriana HOM05D000385 ORTHO05D000269 1.4e-06 57.0 178 24.2
TWI14G0229 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 1.4e-06 57.0 189 24.9
Ciclev10001898m.g Citrus clementina HOM05D000385 ORTHO05D000269 1.8e-06 56.6 190 23.7
Duzib264G0554 Durio zibethinus HOM05D000385 ORTHO05D000269 1.8e-06 56.6 170 26.5
Duzib264G0570 Durio zibethinus HOM05D000385 ORTHO05D000269 1.8e-06 56.6 185 25.9
Duzib264G0855 Durio zibethinus HOM05D000385 ORTHO05D000269 1.8e-06 56.6 170 26.5
Sed0002327 Sechium edule HOM05D000385 ORTHO05D000269 1.8e-06 56.6 166 23.5
Actinidia32241 Actinidia chinensis HOM05D000385 ORTHO05D000269 2.4e-06 56.2 192 23.4
Cfa013581 Carpinus fangiana HOM05D000385 ORTHO05D000269 2.4e-06 56.2 178 23.6
Cfa013589 Carpinus fangiana HOM05D000385 ORTHO05D000269 2.4e-06 56.2 171 24.6
Duzib264G0215 Durio zibethinus HOM05D000385 ORTHO05D000269 2.4e-06 56.2 137 30.7
Hma1.2p1_1051F.1_g252020 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 2.4e-06 56.2 85 32.9
RcHm_v2.0_Chr4g0427081 Rosa chinensis HOM05D000385 ORTHO05D000269 2.4e-06 56.2 101 33.7
THA.LOC104802613 Tarenaya hassleriana HOM05D000385 ORTHO05D000269 2.4e-06 56.2 198 21.7
AT3G17380 Arabidopsis thaliana HOM05D000385 ORTHO05D000269 3.1e-06 55.8 170 22.9
Cpa.g.sc146.37 Carica papaya HOM05D000385 ORTHO05D000269 3.1e-06 55.8 125 30.4
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 3.1e-06 55.8 173 26.0
Ciclev10001934m.g Citrus clementina HOM05D000385 ORTHO05D000269 3.1e-06 55.8 178 24.7
FAN12G1130 Fragaria x ananassa HOM05D000385 ORTHO05D000269 3.1e-06 55.8 176 22.7
Oeu020281.1 Olea europaea HOM05D000385 ORTHO05D000269 3.1e-06 55.8 171 22.8
Dinv04765 Davidia involucrata HOM05D000385 ORTHO05D000269 4.1e-06 55.5 186 24.7
Dinv15821 Davidia involucrata HOM05D000385 ORTHO05D000269 4.1e-06 55.5 140 25.7
FvH4_4g21140 Fragaria vesca HOM05D000385 ORTHO05D000269 4.1e-06 55.5 176 22.7
Hma1.2p1_2816F.1_g328960 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 4.1e-06 55.5 191 24.1
QL05p003118 Quercus lobata HOM05D000385 ORTHO05D000269 4.1e-06 55.5 126 28.6
AL3G30450 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 5.3e-06 55.1 170 22.4
Dinv15823 Davidia involucrata HOM05D000385 ORTHO05D000269 5.3e-06 55.1 171 21.1
Glyma.17G038900 Glycine max HOM05D000385 ORTHO05D000269 5.3e-06 55.1 169 23.1
Phvul.003G119900 Phaseolus vulgaris HOM05D000385 ORTHO05D000269 5.3e-06 55.1 173 24.3
RcHm_v2.0_Chr4g0426761 Rosa chinensis HOM05D000385 ORTHO05D000269 5.3e-06 55.1 173 24.3
Actinidia09159 Actinidia chinensis HOM05D000385 ORTHO05D000269 7.0e-06 54.7 147 28.6
Ciclev10001897m.g Citrus clementina HOM05D000385 ORTHO05D000269 7.0e-06 54.7 190 23.7
DCAR_000810 Daucus carota HOM05D000385 ORTHO05D000269 7.0e-06 54.7 189 26.5
Eucgr.K00614 Eucalyptus grandis HOM05D000385 ORTHO05D000269 7.0e-06 54.7 147 27.9
Sed0003106 Sechium edule HOM05D000385 ORTHO05D000269 7.0e-06 54.7 172 24.4
Sed0012049 Sechium edule HOM05D000385 ORTHO05D000269 7.0e-06 54.7 175 24.6
Sed0013969 Sechium edule HOM05D000385 ORTHO05D000269 7.0e-06 54.7 173 21.4
Aa31LG8G7180 Aethionema arabicum HOM05D000385 ORTHO05D000269 9.1e-06 54.3 111 30.6
AT1G69650 Arabidopsis thaliana HOM05D000385 ORTHO05D000269 9.1e-06 54.3 165 27.3
A03p41730 Brassica napus HOM05D000385 ORTHO05D000269 9.1e-06 54.3 115 31.3
BraA03t13326Z Brassica rapa HOM05D000385 ORTHO05D000269 9.1e-06 54.3 115 31.3


User provided reference genes

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