Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 0.0e+00 1147.1 580 100.0
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 6.7e-286 986.9 583 83.7
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.6e-285 984.9 583 83.5
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.1e-283 979.5 565 84.6
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 1.4e-283 979.2 582 82.8
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 5.0e-281 970.7 582 83.0
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 4.2e-280 967.6 582 83.0
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.4e-278 962.6 580 81.7
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 4.0e-278 961.1 580 82.8
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 5.7e-277 957.2 580 81.4
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.3e-276 956.1 580 81.7
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 3.1e-275 951.4 580 81.0
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 5.3e-275 950.7 581 81.4
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 5.3e-275 950.7 581 81.2
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 1.6e-274 949.1 584 81.0
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 5.0e-273 944.1 580 80.3
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 8.5e-273 943.3 580 80.5
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 1.1e-272 943.0 580 80.2
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.5e-272 942.6 580 80.5
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 1.5e-272 942.6 581 80.7
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 2.5e-272 941.8 617 77.1
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 3.2e-272 941.4 580 79.8
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 7.2e-272 940.3 580 80.2
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 1.2e-271 939.5 580 79.3
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 2.7e-271 938.3 547 83.7
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 3.6e-271 937.9 549 83.8
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.7e-271 937.6 582 79.4
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 5.2e-270 934.1 580 79.1
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 5.2e-270 934.1 580 79.3
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 6.8e-270 933.7 582 79.6
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 1.5e-269 932.6 582 79.2
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 2.0e-269 932.2 552 83.0
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 2.0e-269 932.2 580 79.8
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 3.4e-269 931.4 548 81.8
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 5.7e-269 930.6 580 79.7
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 1.3e-268 929.5 580 79.7
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.2e-268 928.7 580 78.1
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 2.2e-268 928.7 554 82.1
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 2.8e-268 928.3 686 70.7
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 3.7e-268 927.9 581 79.5
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 1.1e-267 926.4 521 86.4
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 2.4e-267 925.2 573 80.8
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 2.4e-267 925.2 521 86.4
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 4.1e-267 924.5 584 78.8
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 4.1e-267 924.5 525 85.9
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 5.4e-267 924.1 587 78.5
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 7.0e-267 923.7 580 78.4
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 3.5e-266 921.4 525 85.3
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 1.3e-265 919.5 579 79.3
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 2.9e-265 918.3 521 85.6
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 6.6e-265 917.1 521 85.4
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 8.6e-265 916.8 588 77.7
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 1.1e-264 916.4 580 79.8
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.1e-264 916.4 581 78.3
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 1.5e-264 916.0 567 80.1
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 1.9e-264 915.6 580 79.1
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 2.5e-264 915.2 586 77.3
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 2.5e-264 915.2 585 77.1
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 2.5e-264 915.2 580 79.0
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 3.3e-264 914.8 580 77.6
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 7.2e-264 913.7 586 77.6
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 7.2e-264 913.7 588 76.7
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 9.5e-264 913.3 588 77.0
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.2e-263 912.9 547 81.9
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 1.6e-263 912.5 588 77.7
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 6.1e-263 910.6 586 77.1
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 8.0e-263 910.2 582 77.3
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 1.0e-262 909.8 590 77.1
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 1.4e-262 909.4 591 76.3
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 1.4e-262 909.4 584 75.9
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 1.4e-262 909.4 588 76.7
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 4.0e-262 907.9 588 76.5
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 4.0e-262 907.9 572 79.7
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 6.8e-262 907.1 587 77.0
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 6.8e-262 907.1 585 77.1
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.2e-261 906.4 593 78.4
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 2.0e-261 905.6 585 76.9
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 3.4e-261 904.8 582 77.8
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 7.5e-261 903.7 521 84.5
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 7.5e-261 903.7 581 76.1
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 1.3e-260 902.9 589 76.6
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 3.7e-260 901.4 589 76.4
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.4e-259 899.4 508 86.4
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 3.1e-259 898.3 521 84.3
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.5e-258 894.8 603 74.5
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 3.5e-258 894.8 581 75.7
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 1.5e-256 889.4 521 83.7
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 8.9e-254 880.2 580 77.2
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 7.5e-253 877.1 544 78.3
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 4.7e-247 857.8 589 73.5
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.8e-246 855.9 563 74.4
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 1.2e-245 853.2 568 72.7
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 1.7e-244 849.4 563 74.2
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 1.4e-243 846.3 564 75.7
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 1.2e-239 833.2 469 85.3
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.7e-236 822.8 501 81.8
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 9.2e-235 817.0 494 82.6
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 9.2e-235 817.0 545 72.7
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 6.0e-234 814.3 468 84.0
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 3.9e-233 811.6 547 72.2
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 9.5e-232 807.0 521 76.8
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 4.7e-231 804.7 468 81.8
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.4e-227 793.1 439 87.0
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 3.9e-225 785.0 558 68.5
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 1.5e-221 773.1 443 84.7
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 9.3e-219 763.8 466 78.8
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 4.0e-214 748.4 544 69.1
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 5.5e-203 711.4 542 64.6
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 2.1e-194 682.9 580 59.7
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.4e-190 669.5 464 72.4
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 1.5e-189 666.8 579 62.5
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 1.3e-172 610.5 565 54.5
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 9.7e-168 594.3 531 56.9
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 8.0e-154 548.1 460 59.1
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 3.7e-151 539.3 502 55.2
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 2.4e-142 510.0 332 75.6
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 3.1e-129 466.5 288 80.6
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 1.4e-86 324.7 254 60.2
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 5.1e-76 289.7 158 85.4
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 5.2e-52 209.9 501 29.3
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 6.8e-44 183.0 208 50.0
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 3.1e-33 147.5 90 78.9
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.6e-29 135.2 440 25.9
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 3.0e-23 114.4 122 57.4
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 4.7e-21 107.1 65 76.9
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 4.4e-19 100.5 79 64.6
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 1.4e-09 68.9 335 25.7
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 9.2e-09 66.2 30 96.7
Ciclev10000007m.g Citrus clementina HOM05D003397 ORTHO05D004390 1.9e-06 58.5 406 23.9
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 5.6e-06 57.0 297 24.6


User provided reference genes

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