Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 1.7e-279 965.3 478 100.0
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 2.7e-216 755.4 469 77.8
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 1.1e-214 750.0 463 80.1
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 5.7e-214 747.7 473 78.9
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 1.3e-213 746.5 454 80.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 6.9e-212 740.7 438 83.1
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.2e-211 740.0 435 81.4
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.3e-210 736.5 437 80.1
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 2.2e-210 735.7 467 77.1
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 3.8e-210 734.9 461 78.3
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.1e-209 733.4 446 81.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 4.2e-209 731.5 440 81.1
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.2e-208 729.9 441 80.3
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.9e-208 727.2 461 78.1
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.4e-207 726.5 493 73.8
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 6.7e-207 724.2 429 80.7
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 8.8e-207 723.8 437 79.6
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 8.8e-207 723.8 467 76.0
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.5e-206 723.0 465 75.5
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.5e-206 723.0 426 82.2
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 7.4e-206 720.7 424 81.4
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 2.8e-205 718.8 468 75.2
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.8e-205 718.8 457 76.6
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 2.8e-205 718.8 466 75.3
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.3e-205 717.6 467 75.2
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 8.2e-205 717.2 448 76.6
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 2.4e-204 715.7 461 75.9
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 2.4e-204 715.7 441 78.0
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.5e-203 713.0 465 75.5
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.7e-202 709.5 462 75.3
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 5.0e-202 708.0 433 78.8
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 1.4e-201 706.4 436 78.0
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 4.2e-201 704.9 469 73.3
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 5.5e-201 704.5 462 75.3
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 7.2e-201 704.1 508 69.9
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 3.6e-200 701.8 470 74.3
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 3.6e-200 701.8 439 78.8
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 4.7e-200 701.4 433 78.3
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.3e-199 699.1 446 76.2
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 9.7e-198 693.7 466 74.0
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 9.7e-198 693.7 429 78.3
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.8e-197 692.2 436 76.1
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 3.7e-197 691.8 470 73.8
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 4.8e-197 691.4 446 76.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 2.4e-196 689.1 446 75.3
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 3.5e-195 685.3 456 74.1
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.2e-194 682.6 444 75.0
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 2.9e-194 682.2 442 73.8
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 1.1e-193 680.2 455 73.4
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 1.1e-193 680.2 423 75.4
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 2.5e-193 679.1 447 74.0
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 4.2e-193 678.3 449 74.8
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 9.4e-193 677.2 460 71.1
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 1.6e-192 676.4 423 75.4
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.6e-192 676.4 437 74.8
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.7e-192 675.6 441 73.2
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 4.7e-192 674.9 460 70.9
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.0e-191 673.7 460 70.7
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.0e-191 672.2 421 77.4
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 5.2e-191 671.4 428 75.0
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 5.7e-190 667.9 466 72.3
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.7e-189 665.2 552 62.5
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 7.7e-187 657.5 443 72.2
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 3.8e-186 655.2 433 74.4
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 9.4e-185 650.6 479 68.3
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 2.7e-184 649.0 382 81.7
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 8.8e-183 644.0 439 72.7
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 2.8e-181 639.0 382 79.1
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 8.3e-181 637.5 379 80.5
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.4e-180 636.7 431 72.9
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.7e-179 632.5 384 78.1
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.7e-178 629.8 388 76.3
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 5.5e-177 624.8 437 74.1
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 3.0e-175 619.0 458 68.1
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 8.8e-175 617.5 385 76.1
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 2.6e-174 615.9 381 75.1
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 3.6e-168 595.5 449 67.0
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 1.2e-166 590.5 336 83.9
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 3.4e-166 589.0 431 68.9
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 4.4e-166 588.6 424 69.8
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 4.1e-164 582.0 409 69.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 4.3e-161 572.0 397 69.8
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 3.6e-160 568.9 441 65.5
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 1.2e-158 563.9 468 63.2
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 2.7e-155 552.7 418 62.7
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 6.0e-155 551.6 403 67.2
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.0e-154 549.3 355 73.8
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 6.6e-154 548.1 435 62.1
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 6.0e-147 525.0 315 80.6
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.4e-143 513.8 365 68.2
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 3.9e-138 495.7 456 56.6
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 8.7e-130 468.0 441 55.8
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 3.5e-115 419.5 284 72.5
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 3.9e-114 416.0 462 47.2
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 2.3e-106 390.2 246 74.4
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.6e-99 367.5 320 61.6
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 6.1e-99 365.5 320 61.6
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 1.8e-95 354.0 443 44.5
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 5.5e-92 342.4 202 79.2
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 6.1e-83 312.4 262 56.5
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 3.7e-80 303.1 225 70.7
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 5.5e-76 289.3 211 68.7
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.5e-68 264.6 179 70.4
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 1.7e-61 241.1 307 48.2
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 1.9e-60 237.7 440 37.7
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 2.1e-51 207.6 193 56.5
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 4.7e-35 153.3 93 77.4
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.7e-35 153.3 132 57.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.5e-33 148.3 89 80.9
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 2.1e-30 137.9 89 75.3
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 8.9e-18 95.9 58 75.9
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.1e-11 74.7 42 85.7
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 9.3e-07 59.3 37 73.0


User provided reference genes

Program Settings