Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 2.5e-164 582.0 290 100.0
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 1.6e-142 509.6 285 87.7
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 6.0e-142 507.7 285 84.9
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 6.0e-142 507.7 287 86.4
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 2.5e-140 502.3 284 86.6
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 6.2e-139 497.7 285 82.1
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 6.2e-139 497.7 287 84.0
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 5.2e-138 494.6 285 82.1
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 8.9e-138 493.8 285 82.1
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 4.4e-137 491.5 283 84.1
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 7.6e-137 490.7 285 83.5
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 1.7e-136 489.6 286 81.8
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 2.2e-136 489.2 285 82.1
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 1.4e-135 486.5 318 77.0
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 2.4e-135 485.7 285 81.1
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 7.1e-135 484.2 285 81.1
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 7.1e-135 484.2 285 81.1
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 7.1e-135 484.2 286 79.7
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 9.3e-135 483.8 285 81.1
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 1.6e-134 483.0 285 81.8
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 4.6e-134 481.5 285 80.7
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 6.0e-134 481.1 285 80.4
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 2.3e-133 479.2 281 80.8
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 3.0e-133 478.8 286 78.7
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 3.0e-133 478.8 285 80.4
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 5.1e-133 478.0 287 78.7
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 8.7e-133 477.2 285 79.3
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.1e-132 476.9 289 79.9
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 1.5e-132 476.5 286 79.0
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.9e-132 476.1 286 79.4
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.5e-132 475.7 285 78.9
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 4.3e-132 474.9 275 84.7
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 4.3e-132 474.9 285 79.6
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 7.3e-132 474.2 285 80.7
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 2.1e-131 472.6 283 79.2
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 2.8e-131 472.2 285 79.6
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 3.6e-131 471.9 277 83.0
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 8.1e-131 470.7 285 78.9
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.1e-130 470.3 285 77.5
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 1.1e-130 470.3 285 77.9
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 3.1e-130 468.8 287 78.0
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 9.0e-130 467.2 299 76.9
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 1.5e-129 466.5 285 79.3
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 2.6e-129 465.7 290 78.3
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 4.4e-129 464.9 285 78.2
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.2e-128 462.6 286 77.3
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 3.8e-128 461.8 286 77.3
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 4.9e-128 461.5 283 79.2
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 5.4e-127 458.0 289 77.2
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 5.4e-127 458.0 287 76.7
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 5.4e-127 458.0 286 76.2
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 7.1e-127 457.6 285 75.8
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 1.6e-126 456.4 287 75.6
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 3.5e-126 455.3 285 76.8
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 7.9e-126 454.1 287 74.9
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 7.9e-126 454.1 285 76.1
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.3e-125 453.4 285 76.5
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 1.7e-125 453.0 280 78.9
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.7e-125 453.0 280 76.8
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 3.9e-125 451.8 272 79.0
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 6.6e-125 451.1 285 75.1
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 2.5e-124 449.1 281 79.0
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 2.5e-124 449.1 285 75.1
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 3.3e-124 448.7 264 81.4
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 9.6e-124 447.2 283 76.3
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 2.8e-123 445.7 277 77.3
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 4.8e-123 444.9 288 73.6
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 1.1e-122 443.7 289 73.4
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 6.9e-122 441.0 288 73.3
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.5e-121 439.9 285 73.3
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 3.4e-121 438.7 280 76.1
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 7.6e-121 437.6 290 73.8
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 4.9e-120 434.9 285 75.1
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 6.4e-120 434.5 280 74.3
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.7e-118 429.1 283 75.6
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 7.9e-118 427.6 293 72.4
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 5.1e-117 424.9 286 72.0
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 4.3e-116 421.8 285 71.2
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 6.2e-115 417.9 253 81.0
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.7e-112 409.8 277 74.7
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 4.9e-112 408.3 490 48.2
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.9e-111 406.4 245 78.4
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 7.1e-111 404.4 290 66.6
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.8e-107 392.5 216 86.1
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 4.8e-107 391.7 216 85.2
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 6.5e-104 381.3 279 66.3
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 9.3e-103 377.5 197 90.9
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 2.5e-100 369.4 289 66.1
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 1.6e-99 366.7 240 75.0
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 4.8e-99 365.2 243 73.7
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 1.7e-96 356.7 204 79.4
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.2e-96 356.3 231 74.0
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 6.5e-96 354.8 231 73.6
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 2.7e-94 349.4 319 60.8
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 7.9e-94 347.8 225 72.9
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.5e-92 343.6 287 61.3
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 4.4e-92 342.0 236 72.0
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.3e-91 340.5 188 83.5
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 1.4e-90 337.0 267 63.3
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 4.1e-90 335.5 287 56.8
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 1.3e-88 330.5 289 60.6
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 1.6e-86 323.6 253 67.2
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 2.7e-86 322.8 239 68.6
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 4.7e-86 322.0 187 80.2
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.0e-80 304.3 184 78.8
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 1.6e-78 297.0 233 63.9
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 4.0e-77 292.4 226 66.4
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 1.5e-76 290.4 294 54.8
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.8e-74 283.5 218 62.8
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.1e-74 282.3 172 78.5
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.1e-74 282.3 172 78.5
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 1.2e-73 280.8 291 52.6
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.3e-72 277.3 163 79.8
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.2e-70 270.8 152 82.9
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 3.4e-68 262.7 286 52.4
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 2.6e-60 236.5 294 43.5
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 7.3e-55 218.4 216 55.1
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 4.4e-52 209.1 164 66.5
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 1.6e-49 200.7 187 51.9
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.0e-41 173.7 95 84.2
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 4.7e-38 162.5 104 76.9
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.1e-33 147.1 112 63.4
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 3.3e-31 139.8 202 40.6
PGSC0003DMG401014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.6e-20 103.6 67 77.6
GSVIVG01002825001 Vitis vinifera HOM05D005203 ORTHO05D006383 9.9e-20 101.7 69 75.4
CAN.G1725.1 Capsicum annuum HOM05D005203 ORTHO05D006383 4.9e-19 99.4 63 77.8
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 3.2e-18 96.7 77 62.3
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.8e-14 83.6 45 82.2
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 1.4e-13 81.3 48 68.8
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 9.9e-12 75.1 33 90.9


User provided reference genes

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