Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 1.0e-72 276.6 133 100.0
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 2.0e-52 209.1 131 76.3
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 4.5e-52 208.0 136 72.8
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 2.9e-51 205.3 131 76.3
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 3.8e-51 204.9 157 66.9
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 3.2e-50 201.8 131 72.5
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 5.5e-50 201.1 131 73.3
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.2e-49 199.9 127 76.4
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 3.6e-49 198.4 127 75.6
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 4.7e-49 198.0 127 74.0
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 7.9e-49 197.2 130 73.8
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 7.9e-49 197.2 131 72.5
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.0e-48 196.8 134 70.1
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 1.4e-48 196.4 130 70.8
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 1.8e-48 196.1 131 72.5
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 2.3e-48 195.7 131 74.8
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 3.0e-48 195.3 131 72.5
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 3.9e-48 194.9 131 70.2
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 5.1e-48 194.5 136 68.4
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 8.8e-48 193.7 131 72.5
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 8.8e-48 193.7 127 74.8
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 1.5e-47 193.0 131 71.8
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 1.5e-47 193.0 131 73.3
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 2.0e-47 192.6 131 71.8
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 2.0e-47 192.6 131 70.2
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 3.3e-47 191.8 131 73.3
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 4.4e-47 191.4 131 72.5
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 4.4e-47 191.4 131 70.2
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 4.4e-47 191.4 127 70.1
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 4.4e-47 191.4 131 71.8
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 4.4e-47 191.4 131 71.8
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 5.7e-47 191.0 131 71.8
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 7.4e-47 190.7 131 71.0
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 7.4e-47 190.7 130 67.7
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 9.7e-47 190.3 127 70.9
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 9.7e-47 190.3 129 75.2
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 9.7e-47 190.3 131 70.2
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 9.7e-47 190.3 131 73.3
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 9.7e-47 190.3 131 70.2
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 9.7e-47 190.3 131 71.0
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 1.3e-46 189.9 127 71.7
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 1.3e-46 189.9 131 71.0
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.3e-46 189.9 127 70.1
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.3e-46 189.9 131 69.5
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 4.8e-46 188.0 129 69.0
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 6.3e-46 187.6 129 72.9
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 1.1e-45 186.8 123 70.7
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 1.4e-45 186.4 127 69.3
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 1.8e-45 186.0 127 71.7
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 1.8e-45 186.0 130 69.2
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 2.4e-45 185.7 131 70.2
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 2.4e-45 185.7 131 68.7
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 2.4e-45 185.7 129 72.1
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.1e-45 185.3 133 66.2
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 5.3e-45 184.5 131 67.9
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 5.3e-45 184.5 131 67.9
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 5.3e-45 184.5 131 71.8
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 7.0e-45 184.1 131 67.9
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 7.0e-45 184.1 131 67.2
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 9.1e-45 183.7 131 67.9
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 2.0e-44 182.6 129 69.8
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.0e-44 182.6 131 67.9
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.6e-44 182.2 128 66.4
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 2.6e-44 182.2 131 67.9
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 5.9e-44 181.0 129 68.2
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 1.0e-43 180.3 128 68.8
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.7e-43 179.5 131 66.4
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 1.7e-43 179.5 127 66.9
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.7e-43 179.5 128 65.6
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.2e-43 179.1 131 66.4
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.2e-43 179.1 127 70.9
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.9e-43 178.7 156 60.9
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.0e-43 177.9 127 70.1
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 5.0e-43 177.9 130 67.7
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 1.4e-42 176.4 128 67.2
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 3.2e-42 175.3 130 63.8
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 4.2e-42 174.9 131 64.9
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 5.5e-42 174.5 131 64.9
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 1.2e-41 173.3 133 63.2
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.2e-41 173.3 127 65.4
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 1.2e-41 173.3 128 67.2
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 2.7e-41 172.2 133 66.2
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 2.7e-41 172.2 129 62.0
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.7e-41 172.2 131 63.4
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 4.7e-41 171.4 133 66.2
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 6.1e-41 171.0 123 68.3
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 1.4e-40 169.9 130 63.8
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 1.4e-40 169.9 132 62.9
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 2.3e-40 169.1 129 61.2
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 3.9e-40 168.3 123 68.3
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 3.9e-40 168.3 131 64.9
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 8.8e-40 167.2 96 78.1
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 2.0e-39 166.0 128 67.2
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 3.3e-39 165.2 103 75.7
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 5.7e-39 164.5 120 64.2
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 1.1e-37 160.2 124 58.1
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 2.4e-37 159.1 127 63.0
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.4e-37 159.1 130 61.5
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 3.5e-36 155.2 89 79.8
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 5.9e-36 154.5 108 70.4
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 7.7e-36 154.1 131 57.3
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 1.0e-35 153.7 115 63.5
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 6.5e-35 151.0 83 81.9
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 8.5e-35 150.6 111 61.3
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 3.2e-34 148.7 119 58.8
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 4.7e-33 144.8 99 70.7
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 3.0e-32 142.1 128 57.0
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 9.7e-31 137.1 121 57.0
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 2.8e-30 135.6 93 72.0
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 1.1e-29 133.7 106 60.4
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 3.1e-29 132.1 117 58.1
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.5e-23 113.2 128 43.8
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 2.6e-23 112.5 128 44.5
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.4e-21 106.7 93 57.0
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 3.5e-20 102.1 117 41.0
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 2.3e-19 99.4 89 57.3
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 2.3e-11 72.8 122 34.4


User provided reference genes

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