Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A155T98 Lonicera japonica HOM05D000239 ORTHO05D234289 4.3e-18 93.6 46 100.0
Lj5A156T87 Lonicera japonica HOM05D000239 ORTHO05D235671 4.3e-18 93.6 46 100.0
Potri.015G040100 Populus trichocarpa HOM05D000239 ORTHO05D000484 2.1e-09 64.7 41 78.0
Cfa019679 Carpinus fangiana HOM05D000239 ORTHO05D000484 4.7e-09 63.5 41 75.6
Haze_18810 Corylus avellana HOM05D000239 ORTHO05D000484 6.2e-09 63.2 41 73.2
Dinv10177 Davidia involucrata HOM05D000239 ORTHO05D000484 8.1e-09 62.8 42 76.2
Sed0027543 Sechium edule HOM05D000239 ORTHO05D000484 8.1e-09 62.8 41 78.0
GSVIVG01008413001 Vitis vinifera HOM05D000239 ORTHO05D000484 1.4e-08 62.0 43 69.8
Ciclev10007317m.g Citrus clementina HOM05D000239 ORTHO05D000484 1.8e-08 61.6 41 73.2
Sabra15G0057100 Salix brachista HOM05D000239 ORTHO05D000484 2.4e-08 61.2 41 70.7
Aqoxy3G00109 Aquilegia oxysepala HOM05D000239 ORTHO05D000484 4.0e-08 60.5 41 75.6
MELO3C002125.2 Cucumis melo HOM05D000239 ORTHO05D000484 4.0e-08 60.5 41 73.2
CsaV3_1G007070 Cucumis sativus L. HOM05D000239 ORTHO05D000484 4.0e-08 60.5 41 73.2
Lj4g0013397 Lotus japonicus HOM05D000239 ORTHO05D000484 4.0e-08 60.5 33 84.8
Duzib068G0966 Durio zibethinus HOM05D000239 ORTHO05D000484 5.2e-08 60.1 41 70.7
CiPaw.15G140500 Carya illinoinensis HOM05D000239 ORTHO05D000484 6.8e-08 59.7 40 75.0
ClCG04G010710 Citrullus lanatus HOM05D000239 ORTHO05D000484 8.9e-08 59.3 31 87.1
Migut.D01561 Erythranthe guttata HOM05D000239 ORTHO05D000484 8.9e-08 59.3 42 66.7
PSO017G2061 Papaver somniferum HOM05D000239 ORTHO05D000484 8.9e-08 59.3 40 77.5
PSO478G5173 Papaver somniferum HOM05D000239 ORTHO05D000484 8.9e-08 59.3 40 77.5
Solyc03g119140.4 Solanum lycopersicum HOM05D000239 ORTHO05D000484 1.2e-07 58.9 40 70.0
Sopen03g038030 Solanum pennellii HOM05D000239 ORTHO05D000484 1.2e-07 58.9 40 70.0
Actinidia18903 Actinidia chinensis HOM05D000239 ORTHO05D000484 1.5e-07 58.5 37 75.7
CAN.G1129.16 Capsicum annuum HOM05D000239 ORTHO05D000484 1.5e-07 58.5 40 70.0
Cc04_g06430 Coffea canephora HOM05D000239 ORTHO05D000484 1.5e-07 58.5 31 83.9
Dinv18256 Davidia involucrata HOM05D000239 ORTHO05D000484 1.5e-07 58.5 40 77.5
Lalb_Chr05g0221791 Lupinus albus HOM05D000239 ORTHO05D000484 2.0e-07 58.2 35 77.1
Manes.06G007900 Manihot esculenta HOM05D000239 ORTHO05D000484 2.0e-07 58.2 34 76.5
Sabra12G0033900 Salix brachista HOM05D000239 ORTHO05D000484 2.0e-07 58.2 41 73.2
DCAR_031740 Daucus carota HOM05D000239 ORTHO05D000484 2.6e-07 57.8 40 72.5
Peaxi162Scf00683g00162 Petunia axillaris HOM05D000239 ORTHO05D000484 2.6e-07 57.8 30 86.7
Lalb_Chr09g0330441 Lupinus albus HOM05D000239 ORTHO05D000484 3.4e-07 57.4 32 78.1
Manes.14G170100 Manihot esculenta HOM05D000239 ORTHO05D000484 3.4e-07 57.4 34 76.5
Potri.012G048400 Populus trichocarpa HOM05D000239 ORTHO05D000484 3.4e-07 57.4 31 87.1
QL10p028184 Quercus lobata HOM05D000239 ORTHO05D000484 3.4e-07 57.4 41 70.7
QL10p028295 Quercus lobata HOM05D000239 ORTHO05D000484 3.4e-07 57.4 41 70.7
Actinidia35122 Actinidia chinensis HOM05D000239 ORTHO05D000484 4.4e-07 57.0 37 73.0
Duzib084G0861 Durio zibethinus HOM05D000239 ORTHO05D000484 4.4e-07 57.0 38 73.7
Thecc.03G053200 Theobroma cacao HOM05D000239 ORTHO05D000484 4.4e-07 57.0 41 70.7
Cpa.g.sc3.411 Carica papaya HOM05D000239 ORTHO05D000484 5.8e-07 56.6 41 70.7
Gohir.A12G268600 Gossypium hirsutum HOM05D000239 ORTHO05D000484 5.8e-07 56.6 43 65.1
Hund02328 Selenicereus undatus HOM05D000239 ORTHO05D000484 7.6e-07 56.2 33 78.8
vmacro16418 Vaccinium macrocarpon HOM05D000239 ORTHO05D000484 9.9e-07 55.8 30 83.3
CSS0005975 Camellia sinensis var. sinensis HOM05D000239 ORTHO05D000484 1.3e-06 55.5 40 67.5
DCAR_014731 Daucus carota HOM05D000239 ORTHO05D000484 1.7e-06 55.1 30 80.0
Nn4g24191 Nelumbo nucifera HOM05D000239 ORTHO05D000484 1.7e-06 55.1 30 80.0
Nitab4.5_0004028g0050 Nicotiana tabacum HOM05D000239 ORTHO05D000484 1.7e-06 55.1 37 70.3
SGA_v2.0_scaffold171G38917 Striga asiatica HOM05D000239 ORTHO05D000484 1.7e-06 55.1 46 65.2
arahy.Tifrunner.gnm1.ann1.PA871Z Arachis hypogaea HOM05D000239 ORTHO05D000484 2.2e-06 54.7 35 74.3
EL10Ac5g11566 Beta vulgaris HOM05D000239 ORTHO05D000484 2.2e-06 54.7 35 68.6
Gorai.008G289300 Gossypium raimondii HOM05D000239 ORTHO05D000484 2.2e-06 54.7 42 64.3
Medtr6g079540 Medicago truncatula HOM05D000239 ORTHO05D000484 2.2e-06 54.7 40 70.0
CAN.G423.24 Capsicum annuum HOM05D000239 ORTHO05D000484 2.9e-06 54.3 30 80.0
Gohir.D09G052918 Gossypium hirsutum HOM05D000239 ORTHO05D000484 2.9e-06 54.3 41 65.9
Gorai.006G056600 Gossypium raimondii HOM05D000239 ORTHO05D000484 2.9e-06 54.3 41 65.9
Nitab4.5_0001986g0060 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.9e-06 54.3 30 80.0
Psat1g033040 Pisum sativum HOM05D000239 ORTHO05D000484 2.9e-06 54.3 30 80.0
Prupe.5G231800 Prunus persica HOM05D000239 ORTHO05D000484 2.9e-06 54.3 41 68.3
Atru.chr9.1751 Acer truncatum HOM05D000239 ORTHO05D000484 3.8e-06 53.9 41 65.9
Carub.0002s2041 Capsella rubella HOM05D000239 ORTHO05D000484 3.8e-06 53.9 41 63.4
Gohir.D12G269000 Gossypium hirsutum HOM05D000239 ORTHO05D000484 3.8e-06 53.9 43 62.8
VMungo0251G2968 Vigna mungo HOM05D000239 ORTHO05D000484 3.8e-06 53.9 35 71.4
Thhalv10018059m.g Eutrema salsugineum HOM05D000239 ORTHO05D000484 4.9e-06 53.5 35 68.6
Glyma.05G245300 Glycine max HOM05D000239 ORTHO05D000484 6.4e-06 53.1 30 83.3
Glyma.07G101600 Glycine max HOM05D000239 ORTHO05D000484 6.4e-06 53.1 31 74.2
Sp5g28840 Schrenkiella parvula HOM05D000239 ORTHO05D000484 6.4e-06 53.1 35 68.6
Ah.11g045240 Amaranthus hybridus HOM05D000239 ORTHO05D000484 8.4e-06 52.8 35 71.4
arahy.Tifrunner.gnm1.ann1.4T9UMN Arachis hypogaea HOM05D000239 ORTHO05D000484 8.4e-06 52.8 35 71.4
Eucgr.B00874 Eucalyptus grandis HOM05D000239 ORTHO05D000484 8.4e-06 52.8 29 79.3
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 8.4e-06 52.8 28 85.7
Oeu026289.1 Olea europaea HOM05D000239 ORTHO05D000484 8.4e-06 52.8 29 82.8
Rhsim12G0139200 Rhododendron simsii HOM05D000239 ORTHO05D000484 8.4e-06 52.8 37 67.6
Solyc06g068980.4 Solanum lycopersicum HOM05D000239 ORTHO05D000484 8.4e-06 52.8 30 76.7
Sopen06g026270 Solanum pennellii HOM05D000239 ORTHO05D000484 8.4e-06 52.8 30 76.7
VMungo0464G0933 Vigna mungo HOM05D000239 ORTHO05D000484 8.4e-06 52.8 31 74.2


User provided reference genes

Program Settings