Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 3.2e-122 441.8 230 100.0
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 3.8e-30 136.0 179 48.0
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 1.2e-23 114.4 239 38.9
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.5e-23 114.0 230 40.0
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 5.8e-23 112.1 237 37.6
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 7.6e-23 111.7 236 38.1
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 7.1e-21 105.1 163 44.2
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 1.2e-20 104.4 236 38.1
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.7e-19 100.5 237 37.6
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 2.1e-17 93.6 236 33.5
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 3.6e-17 92.8 234 36.8
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 4.8e-17 92.4 243 35.4
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 1.4e-16 90.9 226 37.2
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 3.1e-16 89.7 233 33.5
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 6.9e-16 88.6 234 34.2
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 1.2e-15 87.8 217 35.0
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 7.6e-15 85.1 217 34.1
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 9.9e-15 84.7 233 33.0
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 2.9e-14 83.2 242 32.2
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 3.8e-14 82.8 185 36.2
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 1.4e-13 80.9 234 33.3
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 7.1e-13 78.6 228 33.3
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 9.3e-13 78.2 174 36.8
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 2.7e-12 76.6 242 35.1
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 1.8e-11 73.9 244 34.4
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 3.3e-10 69.7 101 47.5
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 4.3e-10 69.3 236 30.5
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 7.4e-10 68.6 236 30.5
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 9.6e-10 68.2 234 33.3
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 1.6e-09 67.4 228 32.0
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 6.2e-09 65.5 205 33.2
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 6.2e-09 65.5 205 33.2
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 1.1e-08 64.7 179 36.3
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.4e-08 63.5 167 29.9
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 5.3e-08 62.4 211 33.6
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 1.2e-07 61.2 114 40.4
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 1.0e-06 58.2 230 29.1
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 3.8e-06 56.2 169 27.8
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 4.9e-06 55.8 224 31.2
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 8.4e-06 55.1 94 38.3
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 8.4e-06 55.1 94 38.3
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 8.4e-06 55.1 205 32.2


User provided reference genes

Program Settings