Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A126T83 Lonicera japonica HOM05D002875 ORTHO05D003215 4.4e-135 484.6 237 100.0
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 1.8e-96 356.3 268 72.4
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 1.4e-75 287.0 268 57.1
Hma1.2p1_0046F.1_g026650 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 5.3e-72 275.0 267 55.1
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 3.8e-70 268.9 266 54.9
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 2.5e-69 266.2 269 52.8
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.2e-68 263.8 266 53.4
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 1.6e-68 263.5 267 53.6
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.1e-68 263.1 267 53.6
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.7e-68 262.7 266 53.8
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 2.0e-66 256.5 267 51.3
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 2.6e-66 256.1 267 52.4
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 7.5e-66 254.6 266 51.9
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.1e-64 250.8 268 48.5
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 1.1e-64 250.8 267 50.2
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 1.4e-64 250.4 267 50.9
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 1.8e-64 250.0 269 50.9
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 2.4e-64 249.6 267 50.2
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 4.1e-64 248.8 267 50.6
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 5.3e-64 248.4 269 49.8
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.3e-64 248.4 266 49.6
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 9.1e-64 247.7 267 49.8
FAN18G3563 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.6e-63 246.9 267 49.4
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 4.5e-63 245.4 267 49.8
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 7.7e-63 244.6 265 49.4
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 1.0e-62 244.2 269 49.4
FAN08G3091 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.7e-62 243.4 267 48.7
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 2.9e-62 242.7 268 48.5
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 3.8e-62 242.3 268 48.1
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 5.0e-62 241.9 267 51.7
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 5.0e-62 241.9 268 49.3
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 1.1e-61 240.7 268 48.5
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 2.5e-61 239.6 268 48.1
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 2.5e-61 239.6 265 49.1
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 3.2e-61 239.2 268 48.1
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 4.2e-61 238.8 267 49.1
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 7.2e-61 238.0 268 47.0
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 9.4e-61 237.7 268 48.5
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 9.4e-61 237.7 268 48.5
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 1.6e-60 236.9 270 47.4
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 2.1e-60 236.5 268 47.4
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 2.7e-60 236.1 268 47.8
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 8.0e-60 234.6 268 49.3
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 8.0e-60 234.6 266 47.7
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 1.4e-59 233.8 267 48.3
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 1.8e-59 233.4 268 47.0
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 2.3e-59 233.0 267 47.6
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 4.0e-59 232.3 267 48.3
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 5.2e-59 231.9 267 48.7
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 6.8e-59 231.5 267 47.9
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 6.8e-59 231.5 266 47.4
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 6.8e-59 231.5 267 47.2
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 8.8e-59 231.1 267 47.9
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 1.5e-58 230.3 266 46.2
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 2.0e-58 229.9 268 48.1
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 4.4e-58 228.8 267 47.2
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 5.7e-58 228.4 272 47.4
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 7.5e-58 228.0 267 45.7
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 1.3e-57 227.3 267 47.9
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.3e-57 227.3 267 47.6
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 1.7e-57 226.9 268 45.9
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 1.7e-57 226.9 267 47.6
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 3.7e-57 225.7 267 46.8
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 2.4e-56 223.0 267 46.4
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 5.4e-56 221.9 272 45.2
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 9.1e-56 221.1 270 46.3
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 1.6e-55 220.3 267 44.6
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 2.7e-55 219.5 266 44.0
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 3.5e-55 219.2 266 43.6
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 3.5e-55 219.2 267 45.3
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 4.5e-55 218.8 267 46.4
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 5.9e-55 218.4 267 45.3
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 1.0e-54 217.6 266 43.6
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 1.3e-54 217.2 267 44.6
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 2.9e-54 216.1 268 45.1
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 3.8e-54 215.7 271 45.4
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 6.6e-54 214.9 246 50.4
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 6.6e-54 214.9 268 44.8
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 2.5e-53 213.0 267 44.9
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 2.5e-53 213.0 267 44.2
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 9.5e-53 211.1 268 44.4
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 9.5e-53 211.1 267 44.2
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 1.2e-52 210.7 268 44.4
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 2.1e-52 209.9 250 45.2
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 2.8e-52 209.5 271 44.6
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 4.7e-52 208.8 267 42.7
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 1.8e-51 206.8 266 42.5
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 2.3e-51 206.5 268 44.0
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 3.0e-51 206.1 268 44.0
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 4.0e-51 205.7 268 44.0
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 4.0e-51 205.7 268 42.9
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 1.5e-50 203.8 268 42.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 9.8e-50 201.1 229 46.7
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 2.8e-49 199.5 268 42.9
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 2.8e-49 199.5 268 42.9
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 2.4e-48 196.4 282 42.2
QL10p009146 Quercus lobata HOM05D002875 ORTHO05D003215 5.9e-47 191.8 277 43.3
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 1.7e-46 190.3 242 44.2
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 1.9e-45 186.8 259 37.8
QL10p010118 Quercus lobata HOM05D002875 ORTHO05D003215 5.6e-45 185.3 272 41.5
QL10p009307 Quercus lobata HOM05D002875 ORTHO05D003215 7.3e-45 184.9 274 40.1
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 1.2e-44 184.1 177 50.8
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 2.1e-44 183.3 176 53.4
QL10p009910 Quercus lobata HOM05D002875 ORTHO05D003215 2.8e-44 183.0 282 41.1
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 3.6e-44 182.6 272 41.2
QL10p008975 Quercus lobata HOM05D002875 ORTHO05D003215 2.0e-42 176.8 268 41.0
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.6e-42 176.4 266 39.8
QL10p010243 Quercus lobata HOM05D002875 ORTHO05D003215 2.9e-41 172.9 270 40.4
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 3.7e-41 172.6 268 40.3
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 3.7e-41 172.6 268 39.9
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 1.9e-40 170.2 266 39.8
QL10p010194 Quercus lobata HOM05D002875 ORTHO05D003215 1.9e-40 170.2 266 40.6
Os05g0594500 Oryza sativa ssp. japonica HOM05D002875 ORTHO05D003215 1.6e-39 167.2 261 38.7
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 8.6e-38 161.4 273 38.8
QL10p010149 Quercus lobata HOM05D002875 ORTHO05D003215 1.5e-37 160.6 188 46.3
Cpa.g.sc76.34 Carica papaya HOM05D002875 ORTHO05D003215 1.4e-35 154.1 234 42.3
QL10p009356 Quercus lobata HOM05D002875 ORTHO05D003215 4.9e-33 145.6 192 46.9
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 4.1e-32 142.5 134 53.0
Zm00001eb345460 Zea mays HOM05D002875 ORTHO05D003215 4.1e-32 142.5 281 33.8
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 4.6e-31 139.0 205 40.0
MBI07_g16947_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 6.0e-31 138.7 181 39.2
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 7.8e-31 138.3 204 37.3
SMO351G0397 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 1.3e-30 137.5 271 35.1
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 2.3e-30 136.7 137 50.4
Prupe.3G306400 Prunus persica HOM05D002875 ORTHO05D003215 2.3e-30 136.7 190 37.9
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 5.1e-30 135.6 209 36.4
Aqoxy5G03377 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 6.6e-30 135.2 232 34.1
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 3.3e-29 132.9 182 39.0
Nn4g22316 Nelumbo nucifera HOM05D002875 ORTHO05D003215 5.6e-29 132.1 206 37.4
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 7.3e-29 131.7 204 34.8
Glyma.19G091300 Glycine max HOM05D002875 ORTHO05D003215 7.3e-29 131.7 182 37.4
Mapoly0015s0063 Marchantia polymorpha HOM05D002875 ORTHO05D003215 1.6e-28 130.6 267 31.8
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 2.1e-28 130.2 204 35.3
Gorai.012G086500 Gossypium raimondii HOM05D002875 ORTHO05D003215 3.6e-28 129.4 182 39.0
Thecc.04G036100 Theobroma cacao HOM05D002875 ORTHO05D003215 3.6e-28 129.4 205 39.0
Duzib187G0424 Durio zibethinus HOM05D002875 ORTHO05D003215 1.1e-27 127.9 177 41.8
Gohir.A05G338300 Gossypium hirsutum HOM05D002875 ORTHO05D003215 1.4e-27 127.5 182 37.9
Manes.17G103200 Manihot esculenta HOM05D002875 ORTHO05D003215 2.3e-27 126.7 204 35.8
Ciclev10014073m.g Citrus clementina HOM05D002875 ORTHO05D003215 4.0e-27 125.9 186 36.0
RcHm_v2.0_Chr2g0175571 Rosa chinensis HOM05D002875 ORTHO05D003215 4.0e-27 125.9 204 34.3
Pp3c1_22410 Physcomitrium patens HOM05D002875 ORTHO05D003215 6.8e-27 125.2 269 33.8
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 1.2e-26 124.4 204 34.3
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 1.5e-26 124.0 182 36.8
Phvul.001G093400 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 1.5e-26 124.0 181 35.9
FAN14G0620 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.4e-26 122.9 204 34.3
SMO367G0458 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 3.4e-26 122.9 266 29.3
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 4.4e-26 122.5 182 36.8
Glyma.16G056400 Glycine max HOM05D002875 ORTHO05D003215 7.6e-26 121.7 182 35.7
Pp3c9_12560 Physcomitrium patens HOM05D002875 ORTHO05D003215 9.9e-26 121.3 269 29.7
MD09G1010700 Malus domestica HOM05D002875 ORTHO05D003215 1.3e-25 120.9 186 35.5
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 1.7e-25 120.6 182 37.9
Pp3c9_870 Physcomitrium patens HOM05D002875 ORTHO05D003215 1.7e-25 120.6 269 29.0
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 6.4e-25 118.6 212 34.4
VMungo1383G3279 Vigna mungo HOM05D002875 ORTHO05D003215 6.4e-25 118.6 181 35.9
CSS0013993 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 1.1e-24 117.9 182 34.1
DCAR_000966 Daucus carota HOM05D002875 ORTHO05D003215 4.1e-24 115.9 204 32.8
arahy.Tifrunner.gnm1.ann1.AA3MKH Arachis hypogaea HOM05D002875 ORTHO05D003215 7.1e-24 115.2 182 35.2
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 2.7e-23 113.2 187 33.7
THA.LOC104823982 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 4.6e-23 112.5 206 35.0
CANSAT64G2306 Cannabis sativa HOM05D002875 ORTHO05D003215 1.7e-22 110.5 177 32.8
PSO017G1731 Papaver somniferum HOM05D002875 ORTHO05D003215 3.0e-22 109.8 182 34.1
Rhsim08G0042800 Rhododendron simsii HOM05D002875 ORTHO05D003215 6.6e-22 108.6 182 33.0
SEGI_10049 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 6.6e-22 108.6 155 38.7
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 2.5e-21 106.7 182 33.0
Sabra14G0000900 Salix brachista HOM05D002875 ORTHO05D003215 4.3e-21 105.9 87 60.9
Sabra14G0000600 Salix brachista HOM05D002875 ORTHO05D003215 1.2e-20 104.4 74 68.9
Sabra14G0000200 Salix brachista HOM05D002875 ORTHO05D003215 3.6e-20 102.8 144 46.5
arahy.Tifrunner.gnm1.ann1.E3K3GD Arachis hypogaea HOM05D002875 ORTHO05D003215 6.2e-20 102.1 168 33.9
Sabra14G0001100 Salix brachista HOM05D002875 ORTHO05D003215 1.4e-19 100.9 74 66.2
Gohir.D04G076700 Gossypium hirsutum HOM05D002875 ORTHO05D003215 2.4e-19 100.1 142 38.7
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 3.1e-19 99.8 84 57.1
GSVIVG01033092001 Vitis vinifera HOM05D002875 ORTHO05D003215 3.1e-19 99.8 154 34.4
Sabra14G0002000 Salix brachista HOM05D002875 ORTHO05D003215 1.2e-18 97.8 80 61.2
CSS0041826 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.0e-18 97.1 180 30.6
TPR.G14262 Trifolium pratense HOM05D002875 ORTHO05D003215 4.4e-18 95.9 140 40.0
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 2.2e-17 93.6 119 47.1
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 1.9e-16 90.5 261 28.0
Sabra14G0005500 Salix brachista HOM05D002875 ORTHO05D003215 2.3e-14 83.6 72 61.1
PSO017G4267 Papaver somniferum HOM05D002875 ORTHO05D003215 1.1e-13 81.3 132 34.8
QL10p009343 Quercus lobata HOM05D002875 ORTHO05D003215 2.5e-13 80.1 116 47.4
Atru.chr9.2509 Acer truncatum HOM05D002875 ORTHO05D003215 1.3e-12 77.8 171 34.5
Atru.chr6.2572 Acer truncatum HOM05D002875 ORTHO05D003215 1.5e-10 70.9 96 37.5
Cpa.g.sc171.14 Carica papaya HOM05D002875 ORTHO05D003215 6.0e-07 58.9 139 27.3
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 3.0e-06 56.6 46 56.5
QL10p009372 Quercus lobata HOM05D002875 ORTHO05D003215 8.7e-06 55.1 41 58.5


User provided reference genes

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