Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 0.0e+00 1926.8 973 100.0
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 1.3e-228 797.3 985 51.9
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.1e-227 794.3 1022 51.7
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 3.4e-213 746.1 978 50.6
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 2.0e-210 736.9 1058 47.4
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 2.1e-207 726.9 1050 46.9
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.0e-206 724.5 1021 48.6
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.6e-199 700.7 1129 43.5
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 2.6e-197 693.3 1008 47.5
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 2.4e-195 686.8 984 46.2
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 3.7e-180 636.3 1026 44.7
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 4.1e-179 632.9 1131 41.9
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 7.3e-176 622.1 981 43.5
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 1.3e-172 611.3 1031 43.4
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 2.9e-172 610.1 1004 42.9
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 6.4e-172 609.0 997 43.3
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 1.1e-171 608.2 990 45.4
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 5.4e-171 605.9 994 43.4
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 3.5e-170 603.2 990 42.8
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 1.7e-169 600.9 1002 43.2
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 3.9e-169 599.7 999 42.9
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 6.6e-169 599.0 1002 44.3
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 4.3e-168 596.3 841 47.0
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 5.6e-168 595.9 1003 43.3
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 9.0e-166 588.6 982 42.9
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 2.6e-165 587.0 1071 41.7
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.1e-162 577.4 1000 42.7
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 1.7e-161 574.3 997 43.2
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 1.3e-159 568.2 588 59.2
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.6e-159 567.8 982 43.1
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 2.1e-159 567.4 1000 42.9
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 4.8e-159 566.2 985 41.3
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 8.1e-159 565.5 1008 42.7
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 6.9e-158 562.4 738 49.3
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 5.8e-157 559.3 1122 37.6
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 1.3e-156 558.1 1008 42.1
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 2.2e-156 557.4 1002 42.9
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 5.4e-155 552.7 978 42.3
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 2.7e-154 550.4 598 55.7
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 1.3e-153 548.1 1029 40.1
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 2.3e-153 547.4 594 56.1
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 1.5e-152 544.7 703 50.2
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 9.6e-152 542.0 624 55.0
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 1.1e-150 538.5 714 50.7
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 5.3e-150 536.2 974 42.6
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 3.4e-149 533.5 537 56.8
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 6.4e-148 529.3 552 56.3
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.4e-147 528.1 994 39.3
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 1.9e-147 527.7 977 40.0
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 7.1e-147 525.8 1030 38.6
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 6.7e-145 519.2 672 52.1
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 1.1e-144 518.5 500 58.2
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.5e-144 518.1 622 52.9
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.9e-144 517.7 573 55.1
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 4.3e-144 516.5 670 52.5
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 6.2e-143 512.7 562 55.2
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 1.4e-142 511.5 984 38.5
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 1.8e-142 511.1 571 55.5
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 2.4e-142 510.8 670 52.4
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 3.4e-141 506.9 1010 39.4
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.3e-140 505.0 631 52.5
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 3.8e-140 503.4 691 51.1
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.9e-140 503.1 639 51.5
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 2.7e-138 497.3 674 50.9
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 5.1e-137 493.0 567 53.6
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 2.4e-134 484.2 538 54.5
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 3.1e-134 483.8 472 58.1
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 3.1e-134 483.8 992 37.1
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.2e-133 481.9 531 54.8
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 1.5e-133 481.5 580 51.4
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 5.9e-133 479.6 581 51.6
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 3.8e-132 476.9 1023 38.8
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 4.2e-131 473.4 500 56.6
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 8.8e-129 465.7 639 48.7
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 1.5e-128 464.9 930 38.5
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 2.5e-128 464.2 637 49.5
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 8.2e-127 459.1 514 52.3
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 4.1e-126 456.8 1004 36.8
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 5.9e-125 453.0 897 37.2
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 5.0e-124 449.9 588 48.6
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 3.9e-121 440.3 554 50.0
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 9.7e-120 435.6 618 46.4
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 3.1e-118 430.6 617 45.9
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 4.1e-118 430.3 703 41.8
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 4.1e-118 430.3 555 48.1
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 1.5e-117 428.3 993 35.6
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 1.0e-116 425.6 464 54.3
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 3.8e-116 423.7 437 56.3
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 5.0e-116 423.3 443 55.5
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 3.2e-115 420.6 451 54.8
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 3.2e-115 420.6 574 47.6
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 4.2e-115 420.2 617 45.2
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.1e-114 417.9 455 54.3
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 2.7e-114 417.5 808 39.9
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 2.7e-114 417.5 524 49.4
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 8.0e-114 416.0 587 45.7
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 1.8e-113 414.8 444 55.0
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 2.0e-112 411.4 586 44.0
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 4.8e-111 406.8 461 52.7
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 1.2e-104 385.6 738 41.5
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 7.0e-102 376.3 494 47.0
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 2.6e-96 357.8 878 36.4
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 1.1e-91 342.4 315 58.1
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 5.8e-72 276.9 639 38.0
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 4.9e-71 273.9 617 34.5
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 1.1e-65 256.1 326 51.2
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 3.7e-34 151.4 113 68.1
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 5.3e-33 147.5 218 44.5
Dinv19923 Davidia involucrata HOM05D006304 ORTHO05D008584 5.8e-32 144.1 166 48.8
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.5e-27 129.4 93 66.7
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 2.5e-27 128.6 250 32.0
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 3.5e-21 108.2 90 65.6
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 1.5e-19 102.8 86 64.0
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 9.7e-19 100.1 85 62.4
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 9.7e-11 73.6 133 42.1
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 1.4e-06 59.7 74 52.7


User provided reference genes

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