Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 8.8e-221 770.0 393 100.0
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 3.9e-168 595.1 394 79.2
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 1.1e-157 560.5 401 72.6
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 2.0e-156 556.2 394 72.6
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 4.9e-155 551.6 396 73.2
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 1.9e-154 549.7 382 74.1
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 4.1e-154 548.5 385 73.8
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 7.1e-154 547.7 361 76.7
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.5e-153 545.4 390 72.3
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 1.1e-151 540.4 401 70.1
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 1.5e-151 540.0 374 74.9
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 1.6e-150 536.6 409 68.5
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 2.1e-150 536.2 402 70.9
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 2.8e-150 535.8 386 71.5
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 8.9e-149 530.8 397 70.3
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.3e-147 526.9 379 71.8
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.3e-147 526.9 398 70.4
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 2.2e-147 526.2 400 70.0
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 4.9e-147 525.0 398 69.6
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 6.4e-147 524.6 434 65.0
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 1.1e-146 523.9 381 70.1
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 1.4e-146 523.5 384 71.4
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 2.4e-146 522.7 400 71.2
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 4.6e-145 518.5 410 67.8
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.0e-144 517.3 391 68.8
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.3e-144 516.9 399 69.2
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 1.3e-144 516.9 383 70.2
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 1.7e-144 516.5 397 70.0
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 3.9e-144 515.4 399 67.7
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 8.7e-144 514.2 410 66.3
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 1.9e-143 513.1 395 67.3
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 7.3e-143 511.1 389 69.2
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 7.3e-143 511.1 407 67.8
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 9.6e-143 510.8 403 66.7
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 9.6e-143 510.8 395 68.9
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 2.8e-142 509.2 394 68.0
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 2.8e-142 509.2 395 68.4
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 3.6e-142 508.8 390 68.5
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 3.6e-142 508.8 401 68.6
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 4.8e-142 508.4 380 68.9
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 8.1e-142 507.7 407 66.8
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 1.1e-141 507.3 403 68.0
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 1.4e-141 506.9 383 67.6
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 1.8e-141 506.5 383 68.7
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 9.0e-141 504.2 407 66.6
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 1.5e-140 503.4 407 66.8
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 7.6e-140 501.1 409 65.0
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 7.6e-140 501.1 388 68.6
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.3e-139 500.4 388 70.1
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 1.3e-139 500.4 387 66.7
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.8e-139 498.8 403 66.7
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 1.4e-138 496.9 410 66.3
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.4e-138 496.9 398 67.3
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 1.4e-138 496.9 389 66.8
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 2.1e-137 493.0 407 65.4
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 3.5e-137 492.3 427 64.2
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 7.9e-137 491.1 394 65.7
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 1.8e-136 490.0 414 64.7
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 6.7e-136 488.0 395 66.3
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 1.1e-135 487.3 400 66.2
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 1.5e-135 486.9 381 66.7
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 4.3e-135 485.3 382 65.4
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 9.6e-135 484.2 403 65.5
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 2.8e-134 482.6 379 67.3
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 4.0e-133 478.8 382 65.2
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.2e-132 477.2 380 63.9
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 1.5e-132 476.9 390 64.6
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 7.6e-132 474.6 346 72.8
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 3.8e-131 472.2 391 63.2
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 6.4e-131 471.5 391 65.2
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 4.2e-130 468.8 387 64.1
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 4.2e-130 468.8 387 64.1
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 5.5e-130 468.4 389 63.5
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 2.7e-129 466.1 378 64.6
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 3.5e-129 465.7 382 65.2
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 3.0e-128 462.6 378 64.3
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 3.0e-128 462.6 380 64.2
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 1.5e-127 460.3 378 63.2
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 1.9e-127 459.9 389 62.7
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 1.9e-127 459.9 389 62.7
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 5.6e-127 458.4 404 59.9
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 7.4e-127 458.0 389 62.2
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 6.2e-126 454.9 379 62.3
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 2.4e-125 453.0 382 62.6
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 2.0e-124 449.9 356 66.9
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 1.0e-123 447.6 467 57.4
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 2.9e-123 446.0 358 67.0
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.9e-123 446.0 390 63.8
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 1.4e-122 443.7 389 63.5
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 1.9e-122 443.4 379 62.5
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 1.6e-121 440.3 379 62.3
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 2.1e-121 439.9 370 64.6
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 2.7e-121 439.5 365 65.8
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 9.6e-119 431.0 362 66.3
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 2.8e-118 429.5 390 58.5
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 1.1e-117 427.6 341 67.2
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 4.2e-114 415.6 306 72.9
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 2.7e-113 412.9 382 59.2
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 1.8e-112 410.2 385 57.4
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 1.8e-112 410.2 416 56.5
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 7.9e-105 384.8 248 80.2
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 2.3e-96 356.7 419 49.4
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 3.2e-82 309.7 296 56.8
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 2.1e-81 307.0 336 52.1
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 2.4e-77 293.5 389 46.0
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.0e-75 288.1 393 44.5
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.0e-75 288.1 393 44.5
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 1.5e-74 284.3 388 46.9
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 6.6e-67 258.8 157 84.1
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 8.4e-38 162.2 383 32.6
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 1.6e-36 157.9 116 68.1
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 7.8e-36 155.6 127 64.6
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 3.4e-31 140.2 323 33.7
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 6.4e-30 136.0 159 48.4
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 2.9e-22 110.5 117 53.0
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 6.2e-17 92.8 167 38.3
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 6.9e-16 89.4 141 40.4
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 4.5e-15 86.7 50 78.0
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 7.1e-13 79.3 52 71.2
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 1.2e-12 78.6 50 72.0
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.2e-12 78.6 50 72.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 7.9e-12 75.9 154 42.9
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 3.7e-09 67.0 368 24.7
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.4e-08 64.3 106 47.2
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 4.0e-08 63.5 45 64.4


User provided reference genes

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