Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 0.0e+00 1092.4 539 100.0
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 3.5e-180 635.6 577 58.4
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 4.2e-173 612.1 581 56.1
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 6.0e-172 608.2 586 55.8
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 5.1e-171 605.1 595 54.8
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 1.6e-169 600.1 581 55.2
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 3.2e-165 585.9 582 54.5
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 5.5e-165 585.1 564 56.6
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 6.1e-164 581.6 590 52.0
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 9.7e-162 574.3 590 52.7
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 4.8e-161 572.0 583 52.1
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 2.0e-159 566.6 588 51.7
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 1.0e-158 564.3 592 52.4
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 5.0e-158 562.0 588 52.9
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 1.1e-157 560.8 581 52.0
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 7.2e-157 558.1 580 51.4
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 9.4e-157 557.8 588 53.7
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.2e-156 557.4 590 51.9
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 1.6e-156 557.0 587 51.3
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 4.7e-156 555.4 583 52.0
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 8.8e-155 551.2 594 51.5
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 9.7e-154 547.7 583 51.5
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.7e-153 547.0 628 50.0
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 2.8e-153 546.2 581 49.6
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 3.7e-153 545.8 589 49.7
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 6.3e-153 545.0 593 50.3
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 1.5e-151 540.4 586 49.1
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 4.5e-151 538.9 582 51.0
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 1.7e-150 537.0 589 49.4
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 5.0e-150 535.4 594 50.8
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 8.5e-150 534.6 579 49.9
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 3.6e-148 529.3 576 49.5
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.0e-147 527.7 598 50.8
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.8e-147 526.9 544 53.5
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 5.2e-147 525.4 585 48.0
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 1.1e-146 524.2 584 48.6
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 1.5e-146 523.9 584 48.5
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 3.3e-146 522.7 581 48.0
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 5.7e-146 521.9 577 48.4
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 7.4e-146 521.5 583 49.4
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.7e-145 520.4 577 48.2
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 8.2e-145 518.1 561 50.8
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 2.4e-144 516.5 578 48.3
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 4.1e-144 515.8 578 47.9
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.0e-142 511.1 546 52.6
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.1e-141 507.7 628 45.7
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 2.7e-140 503.1 585 48.2
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 4.7e-140 502.3 455 56.7
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 4.4e-138 495.7 592 46.1
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 1.7e-137 493.8 584 46.2
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 3.7e-137 492.7 578 47.9
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 3.7e-137 492.7 583 46.7
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 5.3e-136 488.8 589 45.8
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 7.0e-136 488.4 587 45.3
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 1.0e-134 484.6 584 45.9
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 8.5e-134 481.5 588 45.2
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 8.5e-134 481.5 560 46.4
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 1.1e-133 481.1 591 44.5
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 5.5e-133 478.8 582 44.5
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.6e-132 477.2 593 44.0
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 2.7e-132 476.5 621 45.9
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 8.0e-132 474.9 567 48.0
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 1.8e-131 473.8 587 44.0
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 5.2e-131 472.2 720 41.4
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 6.8e-131 471.9 588 44.0
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 6.8e-131 471.9 586 43.3
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 2.0e-130 470.3 592 43.9
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 2.6e-130 469.9 585 43.9
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 3.4e-130 469.5 589 44.1
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 5.7e-130 468.8 583 45.3
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 9.8e-130 468.0 618 41.6
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 2.2e-129 466.8 588 43.9
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 1.1e-128 464.5 590 43.7
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 4.5e-127 459.1 589 43.3
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.0e-123 448.0 577 45.1
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 2.3e-123 446.8 588 43.0
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 1.6e-119 434.1 591 43.3
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 3.9e-118 429.5 586 40.4
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 5.2e-115 419.1 541 43.1
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 1.2e-114 417.9 574 43.6
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 1.7e-113 414.1 580 39.8
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 8.9e-107 391.7 590 40.3
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 5.8e-106 389.0 417 49.6
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 2.2e-105 387.1 581 41.7
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 4.9e-105 386.0 581 41.1
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 5.4e-104 382.5 339 59.6
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 2.7e-103 380.2 619 38.4
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 2.7e-103 380.2 489 43.8
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 7.8e-103 378.6 407 49.9
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 3.9e-102 376.3 397 50.4
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.5e-98 364.4 316 59.2
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 5.1e-94 349.4 539 40.3
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 1.5e-93 347.8 553 38.9
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 3.3e-93 346.7 292 61.6
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.1e-85 321.6 579 33.5
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 3.8e-81 306.6 437 39.8
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 1.9e-80 304.3 297 51.9
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 4.2e-80 303.1 576 33.0
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 6.2e-76 289.3 447 38.3
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.6e-71 274.6 332 41.9
Sopen03g034830 Solanum pennellii HOM05D004701 ORTHO05D005220 1.6e-47 194.9 223 48.0
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 3.0e-46 190.7 213 47.4
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 8.8e-46 189.1 232 44.8
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.5e-42 176.8 290 36.9
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 3.8e-41 173.7 163 55.2
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-38 165.6 240 39.2
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 5.3e-35 153.3 408 29.7
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.0e-35 152.9 246 37.8
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 7.7e-34 149.4 122 63.9
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.1e-31 141.4 246 35.8
Ca_14652_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 3.6e-31 140.6 253 33.2
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 8.0e-31 139.4 121 58.7
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 1.4e-30 138.7 172 47.1
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.0e-29 134.8 206 37.4
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.7e-29 133.3 271 31.4
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 2.4e-27 127.9 121 57.0
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 1.7e-25 121.7 120 50.8
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.2e-24 117.5 246 30.9
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.2e-24 116.3 174 35.1
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 9.4e-24 115.9 225 34.2
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.2e-21 109.0 242 31.4
PRCOL_00003726 Prasinoderma coloniale HOM05D004701 ORTHO05D005220 9.8e-21 105.9 261 30.7
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 9.8e-21 105.9 279 28.0
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.3e-20 102.8 168 38.7
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.2e-18 99.0 147 38.1
Cc00_g08360 Coffea canephora HOM05D004701 ORTHO05D005220 1.6e-18 98.6 106 45.3
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 4.5e-18 97.1 97 56.7
SEGI_06018 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 1.2e-15 89.0 133 36.8
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 3.6e-15 87.4 75 52.0
Oeu052444.1 Olea europaea HOM05D004701 ORTHO05D005220 3.6e-15 87.4 64 64.1
Cre02.g118450 Chlamydomonas reinhardtii HOM05D004701 ORTHO05D005220 6.1e-15 86.7 273 28.6
Cpa.g.sc3599.1 Carica papaya HOM05D004701 ORTHO05D005220 7.5e-13 79.7 62 61.3
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 1.7e-12 78.6 49 77.6
Ah.11g048280 Amaranthus hybridus HOM05D004701 ORTHO05D005220 2.2e-12 78.2 81 51.9
MBI18_g07590_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D015058 3.7e-12 77.4 50 70.0
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis HOM05D004701 ORTHO05D005220 9.1e-11 72.8 386 24.1
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.0e-10 71.6 88 45.5
Haze_06050 Corylus avellana HOM05D022078 ORTHO05D024871 2.7e-10 71.2 67 61.2
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.0e-09 69.3 47 68.1
MD14G1203300 Malus domestica HOM05D004701 ORTHO05D005220 2.3e-09 68.2 55 60.0
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.3e-09 68.2 169 26.0
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.7e-07 60.5 54 63.0
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 1.0e-06 59.3 79 36.7


User provided reference genes

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