Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A105G57 Lonicera japonica HOM05D006238 ORTHO05D007458 1.3e-105 386.7 238 100.0
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 3.5e-23 112.8 132 56.1
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 3.1e-19 99.8 128 49.2
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 2.6e-18 96.7 127 47.2
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 2.6e-18 96.7 127 47.2
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 7.6e-18 95.1 127 46.5
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 9.9e-18 94.7 51 90.2
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 1.7e-17 94.0 127 45.7
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 1.7e-17 94.0 54 83.3
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 2.2e-17 93.6 127 45.7
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 2.9e-17 93.2 127 45.7
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 2.9e-17 93.2 51 88.2
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 3.8e-17 92.8 127 44.9
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 4.9e-17 92.4 127 45.7
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 4.9e-17 92.4 127 44.9
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 4.9e-17 92.4 127 44.1
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 6.4e-17 92.0 128 45.3
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 8.4e-17 91.7 127 45.7
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 8.4e-17 91.7 51 86.3
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 8.4e-17 91.7 51 86.3
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 8.4e-17 91.7 51 86.3
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 1.1e-16 91.3 128 44.5
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 1.4e-16 90.9 127 44.9
AUR62021591 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.9e-16 90.5 128 46.1
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 1.9e-16 90.5 127 44.1
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 1.9e-16 90.5 129 43.4
Sc10g0009770 Simmondsia chinensis HOM05D006238 ORTHO05D007458 1.9e-16 90.5 52 82.7
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 2.4e-16 90.1 127 44.9
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 3.2e-16 89.7 128 43.8
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 4.2e-16 89.4 53 81.1
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 5.4e-16 89.0 127 44.1
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 5.4e-16 89.0 127 44.1
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 5.4e-16 89.0 53 77.4
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 9.3e-16 88.2 127 43.3
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 9.3e-16 88.2 129 42.6
Oeu062485.1 Olea europaea HOM05D006238 ORTHO05D007458 9.3e-16 88.2 128 43.8
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 9.3e-16 88.2 127 43.3
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 9.3e-16 88.2 52 78.8
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 1.2e-15 87.8 128 43.0
AUR62008501 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.2e-15 87.8 128 43.8
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 1.2e-15 87.8 52 78.8
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 2.1e-15 87.0 52 80.8
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 2.1e-15 87.0 51 82.4
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 2.1e-15 87.0 127 42.5
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 2.7e-15 86.7 127 42.5
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 3.5e-15 86.3 128 41.4
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 3.5e-15 86.3 51 80.4
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 3.5e-15 86.3 127 43.3
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 4.6e-15 85.9 127 42.5
Hund26924 Selenicereus undatus HOM05D006238 ORTHO05D007458 4.6e-15 85.9 58 72.4
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 6.0e-15 85.5 127 41.7
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 6.0e-15 85.5 127 41.7
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 6.0e-15 85.5 55 72.7
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 7.9e-15 85.1 53 75.5
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 1.3e-14 84.3 168 34.5
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 1.8e-14 84.0 51 78.4
Cpa.g.sc94.13 Carica papaya HOM05D006238 ORTHO05D007458 3.0e-14 83.2 127 42.5
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 5.1e-14 82.4 55 69.1
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 5.1e-14 82.4 55 69.1
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 5.1e-14 82.4 55 69.1
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 5.1e-14 82.4 54 68.5
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 5.1e-14 82.4 53 73.6
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 6.7e-14 82.0 52 75.0
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 6.7e-14 82.0 52 73.1
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 8.7e-14 81.6 51 76.5
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 1.5e-13 80.9 55 65.5
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 1.9e-13 80.5 55 65.5
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 1.9e-13 80.5 55 65.5
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 2.5e-13 80.1 55 63.6
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 2.5e-13 80.1 52 69.2
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 2.5e-13 80.1 55 61.8
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 2.5e-13 80.1 54 72.2
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 3.3e-13 79.7 125 41.6
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 3.3e-13 79.7 55 65.5
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 3.3e-13 79.7 55 65.5
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 3.3e-13 79.7 129 40.3
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 3.3e-13 79.7 54 70.4
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 5.6e-13 79.0 47 72.3
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 5.6e-13 79.0 55 63.6
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 5.6e-13 79.0 48 72.9
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 5.6e-13 79.0 55 63.6
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 5.6e-13 79.0 48 72.9
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 5.6e-13 79.0 55 61.8
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 5.6e-13 79.0 63 65.1
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 7.4e-13 78.6 54 68.5
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 7.4e-13 78.6 53 66.0
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 9.6e-13 78.2 55 61.8
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 9.6e-13 78.2 55 61.8
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 9.6e-13 78.2 65 56.9
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 1.3e-12 77.8 179 36.3
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 1.6e-12 77.4 55 60.0
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 2.1e-12 77.0 55 61.8
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 6.2e-12 75.5 128 36.7
Sabra15G0078500 Salix brachista HOM05D006238 ORTHO05D007458 1.4e-11 74.3 148 36.5
CDE10G0764 Ceratophyllum demersum HOM05D000773 ORTHO05D000588 1.5e-10 70.9 51 64.7
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 2.0e-10 70.5 127 40.2
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 2.0e-10 70.5 60 60.0
Os03g0212200 Oryza sativa ssp. japonica HOM05D006238 ORTHO05D007458 1.0e-09 68.2 52 61.5
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 3.8e-09 66.2 59 57.6
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 6.4e-09 65.5 52 63.5
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 1.1e-08 64.7 128 36.7
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 1.9e-08 63.9 54 61.1
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 4.2e-08 62.8 60 55.0
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 5.5e-08 62.4 54 59.3
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 5.5e-08 62.4 48 66.7
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 7.1e-08 62.0 52 61.5
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 1.0e-06 58.2 53 58.5
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 1.8e-06 57.4 52 59.6
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 1.8e-06 57.4 52 59.6
Peaxi162Scf00201g00133 Petunia axillaris HOM05D006238 ORTHO05D007458 2.3e-06 57.0 52 59.6
Lju682C3T2 Lonicera japonica HOM05D008788 ORTHO05D009440 6.7e-06 55.5 31 87.1


User provided reference genes

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