Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.7e-54 215.7 107 100.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.8e-43 179.1 107 77.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.5e-42 176.0 107 76.6
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.6e-42 175.3 107 78.5
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.4e-42 174.9 109 78.9
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 5.8e-42 174.1 108 78.7
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.7e-41 172.6 105 74.3
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 2.2e-41 172.2 108 77.8
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 3.8e-41 171.4 107 74.8
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 76.9
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 76.9
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 76.9
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.4e-40 169.5 109 76.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 3.2e-40 168.3 108 75.9
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 4.1e-40 167.9 106 74.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 5.4e-40 167.5 107 72.9
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 7.1e-40 167.2 107 76.6
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 1.6e-39 166.0 101 76.2
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 3.5e-39 164.9 100 76.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.5e-39 164.9 108 74.1
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 4.6e-39 164.5 103 73.8
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.0e-39 164.1 107 72.9
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 6.0e-39 164.1 108 72.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 7.8e-39 163.7 103 72.8
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.3e-38 162.9 107 72.9
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.7e-38 162.5 101 73.3
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 3.0e-38 161.8 101 74.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.0e-38 161.8 105 70.5
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 5.1e-38 161.0 105 73.3
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 5.1e-38 161.0 101 71.3
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 6.6e-38 160.6 105 73.3
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 8.6e-38 160.2 101 73.3
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.1e-37 159.8 107 69.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.1e-37 159.8 107 68.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.1e-37 159.8 107 70.1
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.3e-37 158.3 108 73.1
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.3e-37 158.3 108 73.1
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 4.3e-37 157.9 105 72.4
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 5.6e-37 157.5 107 67.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 5.6e-37 157.5 107 67.3
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 7.3e-37 157.1 105 72.4
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 7.3e-37 157.1 101 70.3
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 7.3e-37 157.1 105 71.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 9.6e-37 156.8 104 74.0
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 9.6e-37 156.8 110 70.9
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-36 156.4 105 70.5
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 1.2e-36 156.4 107 71.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.2e-36 156.4 96 76.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.2e-36 156.4 103 72.8
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.6e-36 156.0 105 71.4
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 73.0
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 73.0
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.8e-36 155.2 100 73.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.8e-36 155.2 108 69.4
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 3.6e-36 154.8 102 74.5
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 4.7e-36 154.5 137 56.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 6.2e-36 154.1 100 73.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 6.2e-36 154.1 99 71.7
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 8.1e-36 153.7 105 69.5
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.8e-35 152.5 105 69.5
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.8e-35 152.5 98 72.4
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.4e-35 152.1 105 69.5
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.1e-35 151.8 102 71.6
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 4.0e-35 151.4 105 69.5
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 4.0e-35 151.4 98 71.4
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 4.0e-35 151.4 101 74.3
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 4.0e-35 151.4 99 70.7
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.2e-35 151.0 101 70.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.9e-35 150.6 153 54.2
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 9.0e-35 150.2 98 71.4
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.2e-34 149.8 98 68.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 3.4e-34 148.3 105 68.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.4e-34 148.3 96 68.8
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 3.8e-33 144.8 101 70.3
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 4.9e-33 144.4 94 69.1
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.1e-32 143.3 92 72.8
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.4e-32 142.9 106 68.9
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 3.2e-32 141.7 102 69.6
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 7.1e-32 140.6 97 71.1
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 9.3e-32 140.2 102 68.6
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 9.3e-32 140.2 102 68.6
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 9.3e-32 140.2 93 72.0
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.2e-31 139.8 92 71.7
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.2e-31 139.8 102 65.7
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 4.6e-31 137.9 92 72.8
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.0e-30 136.7 102 66.7
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 8.7e-30 133.7 94 71.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.5e-29 132.1 87 72.4
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.5e-29 132.1 87 73.6
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.5e-29 132.1 99 65.7
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.5e-29 132.1 99 65.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.3e-29 131.3 87 74.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 9.6e-29 130.2 88 72.7
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.8e-27 125.9 81 71.6
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.4e-27 125.6 101 58.4
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 2.4e-27 125.6 80 72.5
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 5.3e-27 124.4 88 69.3
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.2e-26 123.2 88 64.8
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 4.5e-26 121.3 101 60.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 4.9e-25 117.9 81 70.4
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.4e-24 116.3 90 58.9
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.5e-23 111.7 87 63.2
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.3e-22 109.0 94 56.4
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 3.9e-22 108.2 87 55.2
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.9e-21 105.9 81 65.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 2.5e-21 105.5 77 67.5
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 3.3e-21 105.1 86 58.1
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-18 96.7 69 71.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 3.4e-18 95.1 56 80.4
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.5e-18 94.7 71 62.0
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 4.5e-18 94.7 58 75.9
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 3.2e-16 88.6 55 74.5
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 6.0e-15 84.3 58 70.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.8e-12 75.5 53 73.6
Lj3C809T12 Lonicera japonica HOM05D000039 ORTHO05D029999 4.0e-11 71.6 53 73.6
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.8e-09 65.1 52 59.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 1.6e-07 59.7 50 64.0


User provided reference genes

Program Settings