Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0028181 Lotus japonicus HOM05D004496 ORTHO05D005513 2.2e-121 439.5 312 100.0
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 1.2e-55 221.1 318 56.0
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 3.5e-55 219.5 322 50.3
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 3.5e-55 219.5 327 50.8
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 1.0e-54 218.0 324 50.3
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 1.7e-54 217.2 316 48.1
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 2.3e-54 216.9 338 54.4
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 8.1e-52 208.4 308 53.9
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 2.3e-51 206.8 350 54.3
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 8.9e-51 204.9 320 47.8
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 1.5e-50 204.1 331 53.5
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 1.9e-48 197.2 324 54.6
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 2.4e-48 196.8 321 53.9
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 2.4e-48 196.8 287 59.2
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 1.0e-46 191.4 323 43.7
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.0e-46 191.4 322 53.1
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.3e-46 191.0 312 49.4
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.7e-46 190.7 322 53.1
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 3.0e-46 189.9 287 47.7
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 1.9e-45 187.2 337 50.7
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 7.3e-45 185.3 319 39.5
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 7.3e-45 185.3 285 52.6
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 7.3e-45 185.3 349 43.0
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 1.6e-44 184.1 323 54.2
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 2.1e-44 183.7 322 51.6
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 3.6e-44 183.0 337 51.6
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 8.1e-44 181.8 333 52.0
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.4e-43 181.0 350 41.1
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 1.8e-43 180.6 341 37.5
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 2.4e-43 180.3 323 50.8
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 3.1e-43 179.9 352 51.4
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 4.0e-43 179.5 333 48.3
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 6.9e-43 178.7 338 50.9
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 8.9e-43 178.3 318 46.9
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 8.9e-43 178.3 339 44.0
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 1.2e-42 177.9 333 48.3
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 2.0e-42 177.2 324 46.9
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 5.8e-42 175.6 321 48.6
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 9.9e-42 174.9 327 49.8
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 1.7e-41 174.1 304 40.5
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.7e-41 174.1 319 45.5
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 1.7e-41 174.1 327 49.8
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 2.2e-41 173.7 259 54.1
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 3.8e-41 172.9 328 45.7
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.4e-40 171.0 351 43.0
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 1.4e-40 171.0 340 43.5
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 5.4e-40 169.1 304 43.1
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 9.3e-40 168.3 324 41.4
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 1.6e-39 167.5 322 48.1
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 3.5e-39 166.4 361 47.4
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 3.5e-39 166.4 324 41.7
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 6.0e-39 165.6 329 49.8
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 6.0e-39 165.6 218 47.7
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 7.8e-39 165.2 323 43.3
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 1.0e-38 164.9 342 47.4
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 1.0e-38 164.9 343 42.3
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 2.3e-38 163.7 303 39.9
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 3.0e-38 163.3 326 52.5
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 6.6e-38 162.2 298 37.9
Medtr4g132690 Medicago truncatula HOM05D004496 ORTHO05D005513 1.5e-37 161.0 317 50.2
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 5.6e-37 159.1 316 53.8
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 1.6e-36 157.5 335 43.3
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 2.8e-36 156.8 307 37.5
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 4.8e-36 156.0 312 49.0
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 4.8e-36 156.0 307 38.8
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 6.2e-36 155.6 340 48.5
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 1.1e-35 154.8 319 50.2
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 1.4e-35 154.5 325 48.9
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 1.4e-35 154.5 287 47.4
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 9.0e-35 151.8 313 47.6
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 2.0e-34 150.6 322 41.3
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 4.5e-34 149.4 333 46.8
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 5.8e-34 149.1 261 52.1
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 7.6e-34 148.7 327 45.9
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 9.9e-34 148.3 313 45.4
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 1.3e-33 147.9 262 50.0
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 2.9e-33 146.7 311 34.1
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.9e-33 146.7 306 46.1
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 3.8e-33 146.4 318 42.5
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 4.9e-33 146.0 281 45.6
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 4.9e-33 146.0 281 45.6
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 6.4e-33 145.6 321 42.1
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 6.4e-33 145.6 298 41.3
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 6.4e-33 145.6 336 49.4
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 8.4e-33 145.2 289 51.2
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 1.1e-32 144.8 287 47.4
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 4.2e-32 142.9 318 39.9
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 4.2e-32 142.9 283 48.1
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 7.1e-32 142.1 303 36.3
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 7.1e-32 142.1 337 42.1
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 1.2e-31 141.4 316 41.1
DCAR_002205 Daucus carota HOM05D004496 ORTHO05D005513 2.1e-31 140.6 327 43.1
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 2.1e-31 140.6 282 43.3
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 3.5e-31 139.8 348 42.2
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 3.5e-31 139.8 335 43.9
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 4.6e-31 139.4 281 45.2
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 4.6e-31 139.4 315 40.6
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 4.6e-31 139.4 281 45.2
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 4.6e-31 139.4 281 45.2
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 6.0e-31 139.0 284 47.5
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 2.3e-30 137.1 335 39.4
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 3.0e-30 136.7 330 41.5
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 6.7e-30 135.6 315 39.7
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 1.1e-29 134.8 280 40.4
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 1.5e-29 134.4 273 41.4
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 1.9e-29 134.0 281 40.9
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 1.9e-29 134.0 323 37.8
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 3.3e-29 133.3 320 39.1
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 1.3e-28 131.3 319 42.6
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 4.8e-28 129.4 390 36.4
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 4.8e-28 129.4 321 45.8
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 8.1e-28 128.6 301 42.2
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 1.4e-27 127.9 351 35.3
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 1.8e-27 127.5 328 38.1
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 2.4e-27 127.1 262 39.3
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 3.1e-27 126.7 348 37.4
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 9.0e-27 125.2 322 40.1
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.7e-25 120.9 295 37.3
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 1.7e-25 120.9 397 34.8
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 2.2e-25 120.6 294 39.5
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 2.2e-25 120.6 295 37.3
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 3.8e-25 119.8 239 48.1
HPP92_023384 Vanilla planifolia HOM05D004496 ORTHO05D005513 3.8e-25 119.8 315 33.3
Oeu003154.1 Olea europaea HOM05D004496 ORTHO05D005513 5.5e-24 115.9 266 38.3
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 1.2e-23 114.8 318 40.9
Potri.006G282500 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.6e-23 114.4 330 43.9
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 1.0e-22 111.7 362 33.4
Potri.006G282000 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.0e-22 111.7 333 42.3
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 1.3e-22 111.3 271 38.0
Ca_21060_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 6.7e-22 109.0 302 37.1
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 8.7e-22 108.6 210 36.7
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.5e-21 107.1 202 47.5
SGA_v2.0_scaffold89G27486 Striga asiatica HOM05D004496 ORTHO05D005513 3.3e-21 106.7 337 46.0
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 4.3e-21 106.3 279 32.6
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 9.6e-21 105.1 272 37.5
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 2.8e-20 103.6 186 46.8
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 6.9e-19 99.0 144 43.1
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 5.8e-18 95.9 134 47.0
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 5.8e-18 95.9 308 32.8
TPR.G37047 Trifolium pratense HOM05D004496 ORTHO05D005513 1.7e-17 94.4 220 45.0
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 2.9e-17 93.6 227 31.3
Potri.006G283300 Populus trichocarpa HOM05D004496 ORTHO05D005513 6.5e-17 92.4 305 44.3
Nn2g15240 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.0e-14 85.1 262 35.1
Lj1P1236T60 Lonicera japonica HOM05D004496 ORTHO05D005513 8.7e-14 82.0 138 42.0
Nn1g06547 Nelumbo nucifera HOM05D004496 ORTHO05D005513 9.7e-13 78.6 93 53.8
Nn3g21624 Nelumbo nucifera HOM05D004496 ORTHO05D005513 4.1e-11 73.2 262 38.5
BraA03t14400Z Brassica rapa HOM05D004496 ORTHO05D005513 1.5e-10 71.2 130 40.0
Eucgr.D01366 Eucalyptus grandis HOM05D004496 ORTHO05D005513 3.4e-10 70.1 143 40.6
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 1.1e-08 65.1 260 27.3
SGA_v2.0_scaffold4G01894 Striga asiatica HOM05D004496 ORTHO05D005513 1.9e-08 64.3 306 33.7
Nn2g15668 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.6e-07 61.2 91 50.5
Os01g0922100 Oryza sativa ssp. japonica HOM05D004496 ORTHO05D005513 6.7e-06 55.8 43 65.1


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