Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0028074 Lotus japonicus HOM05D004059 ORTHO05D004591 2.3e-263 911.8 477 100.0
VMungo1309G0851 Vigna mungo HOM05D004059 ORTHO05D004591 5.6e-121 438.7 523 54.5
Lj6g0002908 Lotus japonicus HOM05D004059 ORTHO05D004591 8.1e-120 434.9 533 53.8
Glyma.17G054000 Glycine max HOM05D004059 ORTHO05D004591 7.4e-113 411.8 550 51.6
Medtr2g039620 Medicago truncatula HOM05D004059 ORTHO05D004591 3.1e-111 406.4 530 50.6
Glyma.09G064200 Glycine max HOM05D004059 ORTHO05D004591 4.5e-110 402.5 545 51.2
Phvul.009G231600 Phaseolus vulgaris HOM05D004059 ORTHO05D004591 6.4e-109 398.7 523 50.9
TPR.G13416 Trifolium pratense HOM05D004059 ORTHO05D004591 2.1e-104 383.6 545 48.3
Glyma.15G170500 Glycine max HOM05D004059 ORTHO05D004591 6.9e-103 378.6 499 52.1
VMungo1215G3226 Vigna mungo HOM05D004059 ORTHO05D004591 6.7e-98 362.1 515 47.0
Psat1g140200 Pisum sativum HOM05D004059 ORTHO05D004591 1.3e-93 347.8 538 45.7
arahy.Tifrunner.gnm1.ann1.H4FASW Arachis hypogaea HOM05D004059 ORTHO05D004591 1.1e-89 334.7 487 47.4
Phvul.003G135700 Phaseolus vulgaris HOM05D004059 ORTHO05D004591 4.1e-87 326.2 490 45.9
VMungo1215G0279 Vigna mungo HOM05D004059 ORTHO05D004591 6.9e-87 325.5 493 47.3
CiPaw.03G214200 Carya illinoinensis HOM05D004059 ORTHO05D004591 4.5e-86 322.8 532 43.0
QL02p062365 Quercus lobata HOM05D004059 ORTHO05D004591 1.9e-84 317.4 518 43.1
Cfa003070 Carpinus fangiana HOM05D004059 ORTHO05D004591 2.5e-84 317.0 532 42.9
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 6.7e-82 308.9 548 42.3
CSS0005796 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 7.4e-81 305.4 528 41.1
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 5.3e-79 299.3 568 39.8
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 9.1e-79 298.5 543 40.7
Prupe.7G207500 Prunus persica HOM05D004059 ORTHO05D004591 7.7e-78 295.4 569 39.4
arahy.Tifrunner.gnm1.ann1.MX4JUX Arachis hypogaea HOM05D004059 ORTHO05D004591 6.5e-77 292.4 514 43.4
TAR636G3314 Trochodendron aralioides HOM05D004059 ORTHO05D004591 8.5e-77 292.0 520 39.4
TAR624G0558 Trochodendron aralioides HOM05D004059 ORTHO05D004591 1.9e-76 290.8 527 39.5
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 1.4e-74 284.6 535 40.0
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 1.4e-74 284.6 528 38.4
Lalb_Chr11g0074551 Lupinus albus HOM05D004059 ORTHO05D004591 1.8e-74 284.3 381 49.9
Lalb_Chr08g0232291 Lupinus albus HOM05D004059 ORTHO05D004591 1.5e-73 281.2 375 51.5
RcHm_v2.0_Chr2g0093571 Rosa chinensis HOM05D004059 ORTHO05D004591 4.8e-72 276.2 579 37.5
Cc06_g11520 Coffea canephora HOM05D004059 ORTHO05D004591 7.0e-71 272.3 552 38.2
arahy.Tifrunner.gnm1.ann1.0BQ45N Arachis hypogaea HOM05D004059 ORTHO05D004591 1.2e-70 271.6 538 39.2
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 2.6e-70 270.4 536 38.6
FAN19G2456 Fragaria x ananassa HOM05D004059 ORTHO05D004591 4.5e-70 269.6 577 36.7
Ciclev10007937m.g Citrus clementina HOM05D004059 ORTHO05D004591 1.0e-69 268.5 548 38.7
Sed0008144 Sechium edule HOM05D004059 ORTHO05D004591 5.0e-69 266.2 545 37.1
FAN23G2659 Fragaria x ananassa HOM05D004059 ORTHO05D004591 1.2e-67 261.5 584 35.4
Actinidia29906 Actinidia chinensis HOM05D004059 ORTHO05D004591 2.1e-67 260.8 479 40.9
Atru.chr7.1612 Acer truncatum HOM05D004059 ORTHO05D004591 3.6e-67 260.0 548 39.6
Manes.03G034700 Manihot esculenta HOM05D004059 ORTHO05D004591 1.4e-66 258.1 533 37.9
FAN26G3139 Fragaria x ananassa HOM05D004059 ORTHO05D004591 5.2e-66 256.1 584 34.9
Duzib168G0233 Durio zibethinus HOM05D004059 ORTHO05D004591 8.8e-66 255.4 569 36.4
GSVIVG01015189001 Vitis vinifera HOM05D004059 ORTHO05D004591 8.8e-66 255.4 532 38.0
Sabra06G0117700 Salix brachista HOM05D004059 ORTHO05D004591 1.2e-65 255.0 583 36.9
FAN28G1400 Fragaria x ananassa HOM05D004059 ORTHO05D004591 2.0e-65 254.2 585 35.0
Potri.006G148800 Populus trichocarpa HOM05D004059 ORTHO05D004591 2.0e-65 254.2 598 36.8
Eucgr.C03476 Eucalyptus grandis HOM05D004059 ORTHO05D004591 4.4e-65 253.1 559 36.3
TWI34G0199 Tripterygium wilfordii HOM05D004059 ORTHO05D004591 7.5e-65 252.3 535 36.8
Thecc.09G087400 Theobroma cacao HOM05D004059 ORTHO05D004591 9.7e-65 251.9 537 37.8
FAN26G1668 Fragaria x ananassa HOM05D004059 ORTHO05D004591 2.8e-64 250.4 580 34.8
CSS0003764 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 3.1e-63 246.9 496 38.5
Nn8g38830 Nelumbo nucifera HOM05D004059 ORTHO05D004591 4.1e-63 246.5 535 37.6
AUR62029052 Chenopodium quinoa HOM05D004059 ORTHO05D004591 2.0e-62 244.2 542 36.0
Aqoxy7G04020 Aquilegia oxysepala HOM05D004059 ORTHO05D004591 5.9e-62 242.7 539 35.3
ClCG03G015470 Citrullus lanatus HOM05D004059 ORTHO05D004591 7.7e-62 242.3 535 35.5
AUR62033947 Chenopodium quinoa HOM05D004059 ORTHO05D004591 1.0e-61 241.9 545 35.6
Gohir.D07G011700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 2.2e-61 240.7 525 38.1
FvH4_1g07710 Fragaria vesca HOM05D004059 ORTHO05D004591 5.0e-61 239.6 553 35.3
PGR102G2684 Punica granatum HOM05D004059 ORTHO05D004591 3.2e-60 236.9 550 36.0
Gorai.001G012400 Gossypium raimondii HOM05D004059 ORTHO05D004591 4.2e-60 236.5 529 37.4
Manes.16G101000 Manihot esculenta HOM05D004059 ORTHO05D004591 2.7e-59 233.8 564 35.6
DCAR_011967 Daucus carota HOM05D004059 ORTHO05D004591 4.7e-59 233.0 528 36.2
Gohir.A05G030300 Gossypium hirsutum HOM05D004059 ORTHO05D004591 6.1e-59 232.6 537 35.0
Oeu017604.1 Olea europaea HOM05D004059 ORTHO05D004591 8.0e-59 232.3 552 36.1
Gorai.009G031900 Gossypium raimondii HOM05D004059 ORTHO05D004591 1.8e-58 231.1 530 34.5
Solyc07g039570.3 Solanum lycopersicum HOM05D004059 ORTHO05D004591 2.3e-58 230.7 529 35.2
HanXRQChr03g0060341 Helianthus annuus HOM05D004059 ORTHO05D004591 3.0e-58 230.3 543 34.6
Rhsim03G0231600 Rhododendron simsii HOM05D004059 ORTHO05D004591 5.2e-58 229.6 569 36.0
AT5G56960 Arabidopsis thaliana HOM05D004059 ORTHO05D004591 6.8e-58 229.2 543 35.0
Gohir.D05G031700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 2.0e-57 227.6 530 34.3
Aa31LG3G12850 Aethionema arabicum HOM05D004059 ORTHO05D004591 3.4e-57 226.9 511 36.0
Cpa.g.sc61.16 Carica papaya HOM05D004059 ORTHO05D004591 1.3e-56 224.9 499 35.7
Nn6g35501 Nelumbo nucifera HOM05D004059 ORTHO05D004591 1.7e-56 224.6 523 35.4
CAN.G52.7 Capsicum annuum HOM05D004059 ORTHO05D004591 1.1e-55 221.9 526 34.4
Carub.0008s1744 Capsella rubella HOM05D004059 ORTHO05D004591 1.2e-54 218.4 535 34.4
BcaC03g14194 Brassica carinata HOM05D004059 ORTHO05D004591 2.7e-54 217.2 541 34.6
C02p14760 Brassica napus HOM05D004059 ORTHO05D004591 2.7e-54 217.2 541 34.6
THA.LOC104818114 Tarenaya hassleriana HOM05D004059 ORTHO05D004591 2.7e-54 217.2 519 35.8
AL8G32820 Arabidopsis lyrata HOM05D004059 ORTHO05D004591 1.3e-53 214.9 471 36.1
BolC2t07605H Brassica oleracea HOM05D004059 ORTHO05D004591 1.3e-53 214.9 546 34.2
Migut.J00583 Erythranthe guttata HOM05D004059 ORTHO05D004591 5.0e-53 213.0 527 34.3
Peaxi162Scf00028g00036 Petunia axillaris HOM05D004059 ORTHO05D004591 7.2e-52 209.1 497 34.0
CsaV3_1G040580 Cucumis sativus L. HOM05D004059 ORTHO05D004591 9.5e-52 208.8 496 35.9
BraA02t05954Z Brassica rapa HOM05D004059 ORTHO05D004591 1.2e-51 208.4 537 33.5
vmacro06298 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 1.2e-51 208.4 505 35.2
DCAR_031333 Daucus carota HOM05D004059 ORTHO05D004591 8.0e-51 205.7 495 34.7
PSO210G4563 Papaver somniferum HOM05D004059 ORTHO05D004591 2.3e-50 204.1 563 32.0
PSO210G1620 Papaver somniferum HOM05D004059 ORTHO05D004591 4.4e-49 199.9 563 31.8
Sopen07g018910 Solanum pennellii HOM05D004059 ORTHO05D004591 4.4e-49 199.9 490 34.5
CiPaw.04G148500 Carya illinoinensis HOM05D004059 ORTHO05D004591 7.5e-49 199.1 389 38.8
Nitab4.5_0006053g0020 Nicotiana tabacum HOM05D004059 ORTHO05D004591 7.5e-49 199.1 534 33.7
A02p08850 Brassica napus HOM05D004059 ORTHO05D004591 9.8e-49 198.7 535 32.5
SGA_v2.0_scaffold62G21623 Striga asiatica HOM05D004059 ORTHO05D004591 2.8e-48 197.2 505 32.7
MELO3C015488.2 Cucumis melo HOM05D004059 ORTHO05D004591 8.3e-48 195.7 473 35.3
Rhsim05G0018600 Rhododendron simsii HOM05D004059 ORTHO05D004591 1.4e-47 194.9 490 33.7
SGA_v2.0_scaffold23G10028 Striga asiatica HOM05D004059 ORTHO05D004591 2.4e-47 194.1 513 35.5
ECA240G1274 Erigeron canadensis HOM05D004059 ORTHO05D004591 4.1e-47 193.4 537 33.1
MBI01_g09949_MAGBIO Magnolia biondii HOM05D004059 ORTHO05D004591 1.6e-46 191.4 478 33.9
MELO3C004627.2 Cucumis melo HOM05D004059 ORTHO05D004591 5.9e-46 189.5 514 32.9
SalBow6G2434 Salvia bowleyana HOM05D004059 ORTHO05D004591 1.0e-45 188.7 524 32.6
Lsat_1_v5_gn_7_36701 Lactuca sativa HOM05D004059 ORTHO05D004591 3.8e-45 186.8 471 35.9
PGSC0003DMG400022043 Solanum tuberosum HOM05D004059 ORTHO05D004591 7.3e-44 182.6 380 38.7
Gohir.A07G011900 Gossypium hirsutum HOM05D004059 ORTHO05D004591 6.1e-43 179.5 362 39.8
CANSAT56G2242 Cannabis sativa HOM05D004059 ORTHO05D004591 1.4e-42 178.3 661 29.3
Nitab4.5_0002593g0060 Nicotiana tabacum HOM05D004059 ORTHO05D004591 2.3e-42 177.6 531 32.0
Peaxi162Scf00498g00042 Petunia axillaris HOM05D004059 ORTHO05D004591 3.4e-41 173.7 356 38.8
CARHR270700 Cardamine hirsuta HOM05D004059 ORTHO05D004591 4.4e-41 173.3 473 32.3
Lj7A677T52 Lonicera japonica HOM05D004059 ORTHO05D004591 7.5e-41 172.6 387 37.0
Thhalv10013360m.g Eutrema salsugineum HOM05D004059 ORTHO05D004591 2.9e-40 170.6 495 32.5
EL10Ac8g19192 Beta vulgaris HOM05D004059 ORTHO05D004591 3.7e-40 170.2 490 33.7
vmacro17254 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 4.9e-40 169.9 451 33.3
CsaV3_2G001440 Cucumis sativus L. HOM05D004059 ORTHO05D004591 8.3e-40 169.1 490 31.8
Gorai.010G083900 Gossypium raimondii HOM05D004059 ORTHO05D004591 8.3e-40 169.1 409 36.2
Lj4C294G8 Lonicera japonica HOM05D004059 ORTHO05D004591 8.3e-40 169.1 478 32.4
unitig_749.g14229 Utricularia gibba HOM05D004059 ORTHO05D004591 1.2e-38 165.2 503 29.2
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 4.6e-38 163.3 387 35.7
C09p48620 Brassica napus HOM05D004059 ORTHO05D004591 5.9e-38 162.9 520 31.0
Gohir.D06G071950 Gossypium hirsutum HOM05D004059 ORTHO05D004591 7.8e-38 162.5 490 32.9
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 1.0e-37 162.2 457 32.2
Sc08g0008540 Simmondsia chinensis HOM05D004059 ORTHO05D004591 4.7e-35 153.3 510 30.8
Lj4C294T9 Lonicera japonica HOM05D004059 ORTHO05D004591 1.1e-34 152.1 380 34.2
Actinidia38451 Actinidia chinensis HOM05D004059 ORTHO05D004591 4.0e-34 150.2 175 50.9
MBI04_g36310_MAGBIO Magnolia biondii HOM05D004059 ORTHO05D004591 5.2e-34 149.8 486 29.6
Glyma.13G105400 Glycine max HOM05D004059 ORTHO05D004591 8.9e-34 149.1 263 47.1
ATR0749G078 Amborella trichopoda HOM05D004059 ORTHO05D004591 5.8e-33 146.4 510 31.2
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 9.8e-33 145.6 228 43.9
CAN.G3656.1 Capsicum annuum HOM05D004059 ORTHO05D004591 1.9e-31 141.4 267 37.8
BcaB08g36035 Brassica carinata HOM05D004059 ORTHO05D004591 3.5e-30 137.1 219 43.4
BcaB05g22300 Brassica carinata HOM05D004059 ORTHO05D004591 1.0e-29 135.6 442 31.7
CAN.G1583.1 Capsicum annuum HOM05D000597 ORTHO05D004591 6.6e-29 132.9 181 44.8
THA.LOC104811746 Tarenaya hassleriana HOM05D004059 ORTHO05D004591 1.9e-28 131.3 280 37.5
ClCG11G001730 Citrullus lanatus HOM05D004059 ORTHO05D004591 4.3e-28 130.2 457 27.6
PGSC0003DMG400000335 Solanum tuberosum HOM05D000597 ORTHO05D004591 8.1e-27 125.9 304 33.9
Peaxi162Scf00498g00056 Petunia axillaris HOM05D004059 ORTHO05D004591 5.8e-25 119.8 365 31.5
HanXRQChr09g0238101 Helianthus annuus HOM05D004059 ORTHO05D004591 2.2e-24 117.9 363 34.4
Sed0013460 Sechium edule HOM05D004059 ORTHO05D004591 2.2e-24 117.9 262 34.4
BcaC04g20035 Brassica carinata HOM05D004059 ORTHO05D004591 1.1e-23 115.5 213 41.8
TAR383G1057 Trochodendron aralioides HOM05D004059 ORTHO05D004591 1.1e-23 115.5 452 29.9
BolC9t57704H Brassica oleracea HOM05D004059 ORTHO05D004591 2.1e-22 111.3 219 40.2
CDE04G0617 Ceratophyllum demersum HOM05D004059 ORTHO05D004591 6.6e-21 106.3 342 28.9
Peaxi162Scf00498g00054 Petunia axillaris HOM05D004059 ORTHO05D004591 8.6e-21 105.9 279 36.6
Dinv42329 Davidia involucrata HOM05D004059 ORTHO05D004591 3.3e-20 104.0 178 40.4
CDE06G2535 Ceratophyllum demersum HOM05D004059 ORTHO05D004591 1.8e-18 98.2 263 31.9
Hma1.2p1_0672F.1_g201130 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 5.8e-17 93.2 431 26.0
BolC9t57705H Brassica oleracea HOM05D004059 ORTHO05D004591 9.9e-17 92.4 119 40.3
HPP92_023889 Vanilla planifolia HOM05D004059 ORTHO05D004591 9.9e-17 92.4 291 29.9
Zm00001eb385110 Zea mays HOM05D004059 ORTHO05D004591 9.9e-17 92.4 505 26.5
Peaxi162Scf00498g00537 Petunia axillaris HOM05D000597 ORTHO05D004591 1.7e-16 91.7 211 36.0
HPP92_023832 Vanilla planifolia HOM05D004059 ORTHO05D004591 2.4e-15 87.8 311 29.9
Zm00001eb120960 Zea mays HOM05D004059 ORTHO05D004591 3.0e-13 80.9 304 27.0
Actinidia38450 Actinidia chinensis HOM05D004059 ORTHO05D004591 1.9e-12 78.2 229 34.1
Nitab4.5_0002824g0150 Nicotiana tabacum HOM05D004059 ORTHO05D004591 4.3e-12 77.0 129 43.4
Os06g0570900 Oryza sativa ssp. japonica HOM05D004059 ORTHO05D004591 4.3e-12 77.0 533 21.8
Sed0000136 Sechium edule HOM05D004059 ORTHO05D004591 4.3e-12 77.0 122 41.8
Zm00001eb160210 Zea mays HOM05D004059 ORTHO05D004591 9.6e-12 75.9 182 30.2
HPP92_026782 Vanilla planifolia HOM05D004059 ORTHO05D004591 1.6e-11 75.1 481 24.5
Nitab4.5_0002824g0140 Nicotiana tabacum HOM05D004059 ORTHO05D004591 2.1e-11 74.7 124 38.7
SalBow1G7755 Salvia bowleyana HOM05D004059 ORTHO05D004591 3.6e-11 73.9 211 33.2
Dinv42328 Davidia involucrata HOM05D004059 ORTHO05D004591 4.7e-11 73.6 222 34.2
Zm00001eb240050 Zea mays HOM05D004059 ORTHO05D004591 4.7e-11 73.6 603 23.5
TPR.G866 Trifolium pratense HOM05D004059 ORTHO05D004591 1.8e-10 71.6 85 56.5
Os01g0575200 Oryza sativa ssp. japonica HOM05D004059 ORTHO05D004591 2.4e-10 71.2 171 29.2
AL290U10010 Arabidopsis lyrata HOM05D004059 ORTHO05D004591 2.2e-08 64.7 74 40.5
unitig_78.g29617 Utricularia gibba HOM05D004059 ORTHO05D004591 2.9e-08 64.3 336 25.6
Os05g0199800 Oryza sativa ssp. japonica HOM05D004059 ORTHO05D004591 4.9e-08 63.5 169 31.4
SalBow1G5126 Salvia bowleyana HOM05D004059 ORTHO05D004591 8.4e-08 62.8 116 37.9
Os01g0196300 Oryza sativa ssp. japonica HOM05D004059 ORTHO05D004591 2.4e-07 61.2 68 45.6
Os01g0195801 Oryza sativa ssp. japonica HOM05D004059 ORTHO05D004591 4.2e-07 60.5 68 45.6
Zm00001eb337860 Zea mays HOM05D004059 ORTHO05D004591 4.2e-07 60.5 149 29.5
Zm00001eb357120 Zea mays HOM05D004059 ORTHO05D004591 7.1e-07 59.7 137 29.2
Dinv04215 Davidia involucrata HOM05D004059 ORTHO05D000135 4.6e-06 57.0 66 47.0
Solyc12g008930.3 Solanum lycopersicum HOM05D004059 ORTHO05D004591 4.6e-06 57.0 57 43.9


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