Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 4.1e-41 171.0 90 100.0
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.5e-22 109.4 88 70.5
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 7.3e-22 107.1 87 71.3
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 6.8e-20 100.5 93 63.4
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 6.8e-20 100.5 93 63.4
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 1.2e-19 99.8 98 58.2
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.0e-19 99.0 92 59.8
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 2.0e-19 99.0 97 58.8
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 4.4e-19 97.8 98 57.1
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.7e-18 95.9 91 61.5
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.7e-18 95.9 91 61.5
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.9e-18 95.1 91 60.4
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 2.9e-18 95.1 87 63.2
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-18 94.0 91 59.3
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-18 94.0 91 59.3
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 4.2e-17 91.3 91 56.0
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 4.2e-17 91.3 94 58.5
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 5.4e-17 90.9 90 56.7
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 7.1e-17 90.5 91 56.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 7.1e-17 90.5 90 56.7
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.2e-16 89.7 97 56.7
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.2e-16 89.7 99 52.5
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.6e-16 89.4 93 57.0
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.6e-16 89.4 94 55.3
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.1e-16 89.0 93 58.1
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 2.1e-16 89.0 86 61.6
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.7e-16 88.6 91 54.9
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.7e-16 88.6 91 54.9
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 4.6e-16 87.8 92 62.0
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 4.6e-16 87.8 90 56.7
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 4.6e-16 87.8 87 57.5
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 4.6e-16 87.8 94 54.3
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 6.0e-16 87.4 95 57.9
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.0e-15 86.7 101 54.5
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.0e-15 86.7 91 54.9
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 1.3e-15 86.3 95 54.7
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 2.3e-15 85.5 91 54.9
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 2.3e-15 85.5 90 54.4
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.3e-15 85.5 95 53.7
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.0e-15 85.1 93 57.0
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.0e-15 85.1 93 57.0
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.0e-15 85.1 92 55.4
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 5.1e-15 84.3 95 53.7
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.1e-15 84.3 91 53.8
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 8.7e-15 83.6 78 61.5
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.1e-14 83.2 97 50.5
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.1e-14 83.2 93 55.9
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 1.1e-14 83.2 89 56.2
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 1.9e-14 82.4 91 51.6
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 1.9e-14 82.4 89 59.6
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 5.6e-14 80.9 97 53.6
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 5.6e-14 80.9 97 48.5
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 7.3e-14 80.5 66 66.7
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 7.3e-14 80.5 90 51.1
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 9.6e-14 80.1 87 52.9
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.8e-13 78.6 88 51.1
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 4.7e-13 77.8 83 56.6
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.7e-13 77.8 90 50.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 4.7e-13 77.8 86 53.5
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 6.2e-13 77.4 66 66.7
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.2e-13 77.4 93 53.8
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 8.1e-13 77.0 94 47.9
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.1e-12 76.6 92 48.9
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.8e-12 75.9 92 55.4
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.8e-12 75.9 90 51.1
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.4e-12 75.5 96 50.0
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 3.1e-12 75.1 89 52.8
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 1.2e-11 73.2 89 53.9
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.5e-11 72.8 89 50.6
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.5e-11 72.8 72 54.2
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 5.8e-11 70.9 97 45.4
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 5.8e-11 70.9 56 69.6
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 4.9e-10 67.8 84 48.8
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.2e-08 63.2 70 52.9
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 4.3e-06 54.7 49 63.3


User provided reference genes

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