Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 1.2e-21 105.5 52 100.0
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.8e-20 101.7 50 94.0
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 3.0e-20 100.9 51 94.1
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 3.3e-19 97.4 51 90.2
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 7.5e-19 96.3 49 91.8
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 7.5e-19 96.3 47 97.9
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 9.7e-19 95.9 50 92.0
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 1.7e-18 95.1 51 86.3
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 1.7e-18 95.1 51 86.3
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 3.7e-18 94.0 49 89.8
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 1.8e-17 91.7 47 91.5
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 2.4e-17 91.3 50 86.0
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 5.3e-17 90.1 53 86.8
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 7.0e-17 89.7 51 80.4
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 9.1e-17 89.4 47 91.5
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 5.9e-16 86.7 51 78.4
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 7.7e-16 86.3 51 78.4
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 1.0e-15 85.9 51 78.4
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.7e-15 85.1 48 83.3
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.9e-15 84.3 51 74.5
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 2.9e-15 84.3 48 77.1
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 3.8e-15 84.0 51 76.5
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 5.0e-15 83.6 51 76.5
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 5.0e-15 83.6 51 74.5
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 6.5e-15 83.2 51 80.4
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 1.5e-14 82.0 48 75.0
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 1.5e-14 82.0 48 79.2
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 1.5e-14 82.0 48 79.2
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 1.5e-14 82.0 51 76.5
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 1.9e-14 81.6 51 76.5
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 2.5e-14 81.3 51 72.5
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 2.5e-14 81.3 51 78.4
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 3.2e-14 80.9 47 80.9
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 3.2e-14 80.9 47 80.9
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 3.2e-14 80.9 51 76.5
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 4.2e-14 80.5 49 75.5
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 4.2e-14 80.5 51 76.5
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 5.5e-14 80.1 51 74.5
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 5.5e-14 80.1 51 74.5
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 7.2e-14 79.7 47 78.7
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 7.2e-14 79.7 51 74.5
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 9.4e-14 79.3 47 76.6
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.2e-13 79.0 51 74.5
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.2e-13 79.0 51 74.5
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 1.6e-13 78.6 49 71.4
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 1.6e-13 78.6 51 74.5
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 4.7e-13 77.0 51 68.6
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 4.7e-13 77.0 51 66.7
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 4.7e-13 77.0 51 66.7
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 4.7e-13 77.0 51 68.6
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 6.1e-13 76.6 51 68.6
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 6.1e-13 76.6 51 68.6
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 6.1e-13 76.6 51 68.6
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 6.1e-13 76.6 51 68.6
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 6.1e-13 76.6 51 68.6
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 1.0e-12 75.9 51 66.7
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 1.0e-12 75.9 51 66.7
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.0e-12 75.9 48 72.9
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 1.0e-12 75.9 48 72.9
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 1.0e-12 75.9 49 67.3
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 1.4e-12 75.5 51 66.7
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.4e-12 75.5 48 72.9
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 1.8e-12 75.1 51 66.7
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 1.8e-12 75.1 51 70.6
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 3.0e-12 74.3 47 70.2
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 3.0e-12 74.3 51 64.7
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 3.0e-12 74.3 51 68.6
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 3.0e-12 74.3 51 66.7
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 4.0e-12 73.9 48 72.9
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 6.8e-12 73.2 47 72.3
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 8.8e-12 72.8 51 64.7
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 8.8e-12 72.8 51 64.7
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 1.2e-11 72.4 48 70.8
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 1.2e-11 72.4 75 52.0
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.0e-11 71.6 51 64.7
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 3.4e-11 70.9 51 64.7
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 3.4e-11 70.9 41 80.5
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 3.4e-11 70.9 51 72.5
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 4.4e-11 70.5 51 64.7
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 4.4e-11 70.5 51 64.7
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 7.5e-11 69.7 51 62.7
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 8.3e-10 66.2 62 59.7
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 1.0e-07 59.3 36 75.0
TWI81G0786 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 1.3e-07 58.9 49 57.1
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 1.7e-07 58.5 37 67.6
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 2.5e-06 54.7 78 41.0
SHI07594 Sapria himalayana HOM05D007758 ORTHO05D009788 7.2e-06 53.1 30 76.7


User provided reference genes

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