Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0022993 Lotus japonicus HOM05D003556 ORTHO05D003404 5.3e-87 324.3 164 100.0
Lj4g0015413 Lotus japonicus HOM05D001445 ORTHO05D003404 1.3e-40 170.2 90 95.6
Glyma.17G044900 Glycine max HOM05D001445 ORTHO05D003404 8.1e-27 124.4 89 75.3
VMungo1215G2168 Vigna mungo HOM05D001445 ORTHO05D003404 1.5e-25 120.2 90 71.1
Lalb_Chr11g0066641 Lupinus albus HOM05D001445 ORTHO05D003404 4.0e-18 95.5 90 57.8
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 5.2e-18 95.1 90 57.8
Lalb_Chr07g0181461 Lupinus albus HOM05D001445 ORTHO05D003404 1.7e-16 90.1 91 53.8
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 3.8e-16 89.0 86 55.8
Eucgr.C00759 Eucalyptus grandis HOM05D001445 ORTHO05D001261 3.8e-16 89.0 88 54.5
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 1.6e-14 83.6 86 53.5
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.6e-14 83.6 95 48.4
Aqoxy7G04181 Aquilegia oxysepala HOM05D001445 ORTHO05D003404 3.5e-14 82.4 87 50.6
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 3.5e-14 82.4 87 54.0
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 3.5e-14 82.4 92 52.2
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 2.3e-13 79.7 86 48.8
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 6.6e-13 78.2 39 100.0
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 6.6e-13 78.2 91 48.4
MBI13_g01661_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 1.1e-12 77.4 81 51.9
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 1.5e-12 77.0 90 47.8
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 1.9e-12 76.6 91 45.1
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 2.5e-12 76.3 91 48.4
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 4.3e-12 75.5 91 48.4
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 1.6e-11 73.6 91 45.1
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 1.6e-11 73.6 91 47.3
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 2.1e-11 73.2 86 50.0
TWI59G1361 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 8.1e-11 71.2 86 47.7
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 1.1e-10 70.9 92 42.4
TWI14G0192 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.4e-10 70.5 86 45.3
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 6.9e-10 68.2 89 46.1
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 6.9e-10 68.2 89 46.1
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 6.9e-10 68.2 88 42.0
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 6.9e-10 68.2 88 42.0
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 9.0e-10 67.8 92 39.1
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 9.0e-10 67.8 91 41.8
TWI23G0284 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.2e-09 67.4 86 45.3
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 2.0e-09 66.6 83 41.0
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 2.0e-09 66.6 88 42.0
QL03p019019 Quercus lobata HOM05D003556 ORTHO05D003404 3.4e-09 65.9 90 40.0
QL03p019667 Quercus lobata HOM05D003556 ORTHO05D003404 4.4e-09 65.5 90 40.0
QL03p019662 Quercus lobata HOM05D003556 ORTHO05D003404 5.8e-09 65.1 90 40.0
QL08p042930 Quercus lobata HOM05D003556 ORTHO05D003404 5.8e-09 65.1 90 40.0
Rhsim05G0137100 Rhododendron simsii HOM05D003556 ORTHO05D003404 7.6e-09 64.7 91 41.8
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 1.3e-08 63.9 86 41.9
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 1.3e-08 63.9 91 42.9
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 1.3e-08 63.9 93 41.9
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 1.7e-08 63.5 86 46.5
Cfa006647 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.7e-08 63.5 89 42.7
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 1.7e-08 63.5 93 41.9
Cfa006646 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.9e-08 62.8 89 42.7
Manes.09G173500 Manihot esculenta HOM05D003556 ORTHO05D003404 2.9e-08 62.8 91 42.9
QL03p019550 Quercus lobata HOM05D003556 ORTHO05D003404 2.9e-08 62.8 90 38.9
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 3.8e-08 62.4 88 39.8
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 6.4e-08 61.6 83 42.2
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 8.4e-08 61.2 39 76.9
Manes.03G045700 Manihot esculenta HOM05D004113 ORTHO05D005233 1.4e-07 60.5 77 45.5
SHI15103 Sapria himalayana HOM05D003556 ORTHO05D003404 2.4e-07 59.7 92 43.5
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 3.2e-07 59.3 86 41.9
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 3.2e-07 59.3 95 36.8
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 4.2e-07 58.9 90 41.1
Cfa006651 Carpinus fangiana HOM05D003556 ORTHO05D003404 4.2e-07 58.9 88 44.3
Haze_04964 Corylus avellana HOM05D003556 ORTHO05D003404 4.2e-07 58.9 87 37.9
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 4.2e-07 58.9 39 74.4
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 4.2e-07 58.9 92 34.8
Hma1.2p1_0414F.1_g147630 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 7.1e-07 58.2 84 40.5
PSO782G4884 Papaver somniferum HOM05D001445 ORTHO05D001261 7.1e-07 58.2 87 36.8
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 9.3e-07 57.8 90 40.0
Dinv25498 Davidia involucrata HOM05D000036 ORTHO05D002265 9.3e-07 57.8 92 41.3
CiPaw.07G023500 Carya illinoinensis HOM05D003556 ORTHO05D003404 1.2e-06 57.4 88 39.8
Duzib138G0838 Durio zibethinus HOM05D003556 ORTHO05D003404 1.2e-06 57.4 87 36.8
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 1.2e-06 57.4 87 36.8
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 1.2e-06 57.4 39 71.8
PSO782G0985 Papaver somniferum HOM05D001445 ORTHO05D001261 1.6e-06 57.0 85 42.4
Sed0024461 Sechium edule HOM05D003556 ORTHO05D003404 1.6e-06 57.0 92 34.8
AT2G47340 Arabidopsis thaliana HOM05D026554 ORTHO05D001888 2.7e-06 56.2 88 33.0
CDE02G0716 Ceratophyllum demersum HOM05D000085 ORTHO05D000158 2.7e-06 56.2 86 36.0
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 2.7e-06 56.2 89 37.1
THA.LOC104822713 Tarenaya hassleriana HOM05D003556 ORTHO05D003404 2.7e-06 56.2 86 36.0
Cfa006653 Carpinus fangiana HOM05D003556 ORTHO05D003404 3.5e-06 55.8 86 44.2
CiPaw.07G023600 Carya illinoinensis HOM05D003556 ORTHO05D003404 3.5e-06 55.8 89 36.0
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 3.5e-06 55.8 85 41.2
Eucgr.K03504 Eucalyptus grandis HOM05D003556 ORTHO05D003404 3.5e-06 55.8 90 35.6
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 4.6e-06 55.5 88 38.6
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 4.6e-06 55.5 39 71.8
Sabra01G0098200 Salix brachista HOM05D003556 ORTHO05D003404 4.6e-06 55.5 92 34.8
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 4.6e-06 55.5 94 36.2
ATR0693G401 Amborella trichopoda HOM05D001445 ORTHO05D001261 6.0e-06 55.1 89 41.6
Manes.01G228700 Manihot esculenta HOM05D008182 ORTHO05D001888 6.0e-06 55.1 83 37.3
Potri.001G127500 Populus trichocarpa HOM05D003556 ORTHO05D003404 6.0e-06 55.1 92 35.9
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 6.0e-06 55.1 87 39.1
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 7.8e-06 54.7 86 41.9
AT1G02550 Arabidopsis thaliana HOM05D008182 ORTHO05D001888 7.8e-06 54.7 83 30.1
Haze_04119 Corylus avellana HOM05D014310 ORTHO05D003404 7.8e-06 54.7 124 34.7
Eucgr.E00321 Eucalyptus grandis HOM05D001445 ORTHO05D001261 7.8e-06 54.7 87 40.2
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 7.8e-06 54.7 106 34.9
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 7.8e-06 54.7 86 36.0


User provided reference genes

Program Settings