Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0022736 Lotus japonicus HOM05D000045 ORTHO05D007788 4.8e-213 744.2 365 100.0
Lj1g0001785 Lotus japonicus HOM05D000045 ORTHO05D007788 2.7e-176 622.1 365 86.8
Lj1g0017368 Lotus japonicus HOM05D000045 ORTHO05D007788 3.3e-161 572.0 364 81.3
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 8.9e-34 148.7 328 31.1
arahy.Tifrunner.gnm1.ann1.RA57MB Arachis hypogaea HOM05D008645 ORTHO05D007788 1.2e-27 128.3 285 32.3
Lj4g0026673 Lotus japonicus HOM05D011457 ORTHO05D007788 3.1e-26 123.6 265 30.9
Lj2g0006281 Lotus japonicus HOM05D011457 ORTHO05D007788 5.8e-25 119.4 295 31.9
Lj3g0011410 Lotus japonicus HOM05D011457 ORTHO05D007788 5.8e-25 119.4 295 31.9
Lj6g0005229 Lotus japonicus HOM05D011457 ORTHO05D007788 7.5e-25 119.0 295 31.9
arahy.Tifrunner.gnm1.ann1.TC2NGU Arachis hypogaea HOM05D010837 ORTHO05D007788 9.8e-25 118.6 237 31.2
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 9.8e-25 118.6 307 29.3
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 3.7e-24 116.7 310 29.4
arahy.Tifrunner.gnm1.ann1.AXL83M Arachis hypogaea HOM05D008645 ORTHO05D007788 1.2e-22 111.7 376 26.3
arahy.Tifrunner.gnm1.ann1.IRL4YX Arachis hypogaea HOM05D008645 ORTHO05D007788 1.2e-22 111.7 284 29.9
arahy.Tifrunner.gnm1.ann1.F2DF0X Arachis hypogaea HOM05D010837 ORTHO05D007788 3.5e-22 110.2 263 28.5
Medtr4g007830 Medicago truncatula HOM05D011457 ORTHO05D007788 3.5e-22 110.2 224 32.1
arahy.Tifrunner.gnm1.ann1.4TSV6W Arachis hypogaea HOM05D008645 ORTHO05D007788 4.6e-22 109.8 272 27.6
arahy.Tifrunner.gnm1.ann1.GI9T10 Arachis hypogaea HOM05D008645 ORTHO05D007788 4.6e-22 109.8 272 27.6
arahy.Tifrunner.gnm1.ann1.AL9EYS Arachis hypogaea HOM05D008645 ORTHO05D007788 6.0e-22 109.4 310 26.8
arahy.Tifrunner.gnm1.ann1.GDDC9H Arachis hypogaea HOM05D008645 ORTHO05D007788 3.0e-21 107.1 283 29.3
arahy.Tifrunner.gnm1.ann1.2N7Z0C Arachis hypogaea HOM05D008645 ORTHO05D007788 7.3e-20 102.4 284 29.2
arahy.Tifrunner.gnm1.ann1.D6JZRQ Arachis hypogaea HOM05D008645 ORTHO05D007788 7.3e-20 102.4 288 27.1
Medtr4g040020 Medicago truncatula HOM05D009725 ORTHO05D007788 1.1e-18 98.6 200 31.5
arahy.Tifrunner.gnm1.ann1.DG4Z6X Arachis hypogaea HOM05D008645 ORTHO05D007788 1.4e-18 98.2 229 28.4
Lj5g0015857 Lotus japonicus HOM05D009725 ORTHO05D007788 1.8e-18 97.8 234 30.8
Medtr8g089760 Medicago truncatula HOM05D011457 ORTHO05D007788 8.9e-18 95.5 156 35.3
arahy.Tifrunner.gnm1.ann1.A7DQCV Arachis hypogaea HOM05D011457 ORTHO05D007788 1.2e-17 95.1 231 32.0
arahy.Tifrunner.gnm1.ann1.RSA1RP Arachis hypogaea HOM05D008645 ORTHO05D007788 1.2e-17 95.1 277 27.1
arahy.Tifrunner.gnm1.ann1.IZD333 Arachis hypogaea HOM05D008645 ORTHO05D007788 1.7e-16 91.3 340 24.7
arahy.Tifrunner.gnm1.ann1.Y9CTG1 Arachis hypogaea HOM05D008645 ORTHO05D007788 6.4e-16 89.4 306 27.1
arahy.Tifrunner.gnm1.ann1.8LA92R Arachis hypogaea HOM05D010837 ORTHO05D007788 5.4e-15 86.3 148 31.1
arahy.Tifrunner.gnm1.ann1.WW3PD2 Arachis hypogaea HOM05D010837 ORTHO05D007788 2.1e-14 84.3 236 28.4
arahy.Tifrunner.gnm1.ann1.9N7IR1 Arachis hypogaea HOM05D022818 ORTHO05D007788 4.6e-14 83.2 243 25.5
arahy.Tifrunner.gnm1.ann1.NUK2FL Arachis hypogaea HOM05D010837 ORTHO05D007788 4.6e-14 83.2 239 27.6
Medtr6g035170 Medicago truncatula HOM05D009725 ORTHO05D007788 4.6e-14 83.2 218 29.4
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.7e-13 81.3 272 24.3
QL10p051876 Quercus lobata HOM05D022192 ORTHO05D009908 1.2e-11 75.1 260 29.6
COL.COLO4_20373 Corchorus olitorius HOM05D007993 ORTHO05D000898 1.6e-11 74.7 263 24.7
Thecc.04G055800 Theobroma cacao HOM05D008451 ORTHO05D009908 2.8e-11 73.9 208 26.0
QL08p032772 Quercus lobata HOM05D022192 ORTHO05D009908 3.6e-11 73.6 305 26.9
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 6.2e-11 72.8 282 21.6
arahy.Tifrunner.gnm1.ann1.1I2ZQ8 Arachis hypogaea HOM05D008645 ORTHO05D007788 2.4e-10 70.9 249 25.7
arahy.Tifrunner.gnm1.ann1.94TR4L Arachis hypogaea HOM05D017846 ORTHO05D007788 2.4e-10 70.9 302 24.5
Dinv01242 Davidia involucrata HOM05D010363 ORTHO05D008693 4.0e-10 70.1 222 24.3
Medtr8g031230 Medicago truncatula HOM05D009725 ORTHO05D007788 5.2e-10 69.7 271 23.6
Lj5g0014629 Lotus japonicus HOM05D011457 ORTHO05D007788 8.9e-10 68.9 194 29.4
arahy.Tifrunner.gnm1.ann1.EFNC7X Arachis hypogaea HOM05D008645 ORTHO05D007788 1.2e-09 68.6 230 23.9
arahy.Tifrunner.gnm1.ann1.L8MZRF Arachis hypogaea HOM05D010837 ORTHO05D007788 3.4e-09 67.0 235 26.0
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 3.4e-09 67.0 371 24.0
TPR.G36271 Trifolium pratense HOM05D009725 ORTHO05D007788 3.4e-09 67.0 71 40.8
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 4.4e-09 66.6 240 26.2
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 4.4e-09 66.6 345 20.3
Rhsim04G0161400 Rhododendron simsii HOM05D012118 ORTHO05D009908 4.4e-09 66.6 238 24.8
TPR.G18164 Trifolium pratense HOM05D009725 ORTHO05D007788 4.4e-09 66.6 71 42.3
arahy.Tifrunner.gnm1.ann1.6XKL96 Arachis hypogaea HOM05D008645 ORTHO05D007788 5.8e-09 66.2 235 24.3
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 5.8e-09 66.2 328 19.2
arahy.Tifrunner.gnm1.ann1.Q3QHXW Arachis hypogaea HOM05D008645 ORTHO05D007788 7.6e-09 65.9 250 22.4
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 7.6e-09 65.9 276 21.4
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 7.6e-09 65.9 276 21.4
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 7.6e-09 65.9 309 23.0
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 9.9e-09 65.5 301 22.3
TPR.G30128 Trifolium pratense HOM05D009725 ORTHO05D007788 9.9e-09 65.5 101 33.7
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-08 65.1 363 22.9
TPR.G10800 Trifolium pratense HOM05D009725 ORTHO05D007788 1.3e-08 65.1 99 33.3
QL09p039396 Quercus lobata HOM05D022192 ORTHO05D009908 1.7e-08 64.7 144 36.8
COL.COLO4_07542 Corchorus olitorius HOM05D030435 ORTHO05D013856 2.2e-08 64.3 161 29.2
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-08 64.3 280 18.9
TPR.G21967 Trifolium pratense HOM05D009725 ORTHO05D007788 2.2e-08 64.3 71 42.3
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 2.9e-08 63.9 240 26.2
arahy.Tifrunner.gnm1.ann1.29P2VL Arachis hypogaea HOM05D010837 ORTHO05D007788 4.9e-08 63.2 106 33.0
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 4.9e-08 63.2 62 51.6
arahy.Tifrunner.gnm1.ann1.K0IVEK Arachis hypogaea HOM05D008645 ORTHO05D007788 6.4e-08 62.8 69 42.0
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 8.4e-08 62.4 185 25.4
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-07 62.0 277 22.0
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.4e-07 61.6 271 21.4
TPR.G7459 Trifolium pratense HOM05D009725 ORTHO05D007788 1.9e-07 61.2 72 43.1
arahy.Tifrunner.gnm1.ann1.RR9ZRP Arachis hypogaea HOM05D008645 ORTHO05D007788 3.2e-07 60.5 263 25.9
arahy.Tifrunner.gnm1.ann1.928VU4 Arachis hypogaea HOM05D010837 ORTHO05D007788 4.2e-07 60.1 106 32.1
arahy.Tifrunner.gnm1.ann1.BHD3CD Arachis hypogaea HOM05D010837 ORTHO05D007788 4.2e-07 60.1 106 32.1
arahy.Tifrunner.gnm1.ann1.1VF0IH Arachis hypogaea HOM05D010837 ORTHO05D007788 5.4e-07 59.7 106 32.1
arahy.Tifrunner.gnm1.ann1.T0JM81 Arachis hypogaea HOM05D008645 ORTHO05D007788 5.4e-07 59.7 154 28.6
arahy.Tifrunner.gnm1.ann1.C31QLU Arachis hypogaea HOM05D010837 ORTHO05D007788 7.1e-07 59.3 106 30.2
arahy.Tifrunner.gnm1.ann1.IU228R Arachis hypogaea HOM05D010837 ORTHO05D007788 7.1e-07 59.3 106 32.1
arahy.Tifrunner.gnm1.ann1.VIZ2WZ Arachis hypogaea HOM05D027585 ORTHO05D007788 7.1e-07 59.3 197 26.4
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 7.1e-07 59.3 276 23.6
TPR.G7309 Trifolium pratense HOM05D009725 ORTHO05D007788 7.1e-07 59.3 72 41.7
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 9.3e-07 58.9 259 21.2
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.2e-06 58.5 220 25.9
Medtr8g031240 Medicago truncatula HOM05D009725 ORTHO05D007788 1.6e-06 58.2 141 32.6
arahy.Tifrunner.gnm1.ann1.TQX653 Arachis hypogaea HOM05D010837 ORTHO05D007788 2.7e-06 57.4 68 41.2
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 3.5e-06 57.0 257 23.0
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 4.6e-06 56.6 78 38.5
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.6e-06 56.6 235 23.4
arahy.Tifrunner.gnm1.ann1.5EE3V7 Arachis hypogaea HOM05D010837 ORTHO05D007788 6.0e-06 56.2 68 39.7
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea HOM05D001394 ORTHO05D001237 7.8e-06 55.8 62 45.2


User provided reference genes

Program Settings