Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 1.0e-38 162.9 82 100.0
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 1.8e-22 109.0 84 67.9
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 8.1e-20 100.1 86 61.6
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 3.1e-19 98.2 88 59.1
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 6.9e-19 97.1 84 60.7
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 1.2e-18 96.3 88 58.0
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 2.6e-18 95.1 89 61.8
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 2.2e-17 92.0 88 56.8
Glyma.05G084000 Glycine max HOM05D007434 ORTHO05D009541 1.9e-16 89.0 80 61.2
TPR.G19016 Trifolium pratense HOM05D007434 ORTHO05D009541 5.5e-16 87.4 93 54.8
Glyma.17G176700 Glycine max HOM05D007434 ORTHO05D009541 7.1e-16 87.0 83 63.9
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 7.9e-15 83.6 86 55.8
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 1.0e-14 83.2 92 52.2
Phvul.003G245500 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 3.9e-14 81.3 86 55.8
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 4.8e-12 74.3 93 44.1
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 4.0e-11 71.2 92 46.7
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 1.2e-10 69.7 87 49.4
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.5e-10 69.3 97 45.4
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 1.5e-10 69.3 86 44.2
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 2.9e-09 65.1 75 45.3
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 5.0e-09 64.3 75 44.0
arahy.Tifrunner.gnm1.ann1.0D7IHD Arachis hypogaea HOM05D007434 ORTHO05D009541 6.5e-09 63.9 87 43.7
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 1.1e-08 63.2 89 43.8
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 1.9e-08 62.4 75 42.7
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.5e-08 62.0 87 39.1
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 4.2e-08 61.2 85 44.7
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 4.2e-08 61.2 103 42.7
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 4.2e-08 61.2 94 43.6
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 5.5e-08 60.8 93 38.7
Gohir.A02G159900 Gossypium hirsutum HOM05D007434 ORTHO05D009541 5.5e-08 60.8 78 51.3
Gohir.D03G020700 Gossypium hirsutum HOM05D007434 ORTHO05D009541 5.5e-08 60.8 78 51.3
Gorai.003G021800 Gossypium raimondii HOM05D007434 ORTHO05D009541 7.1e-08 60.5 78 51.3
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 7.1e-08 60.5 78 42.3
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 9.3e-08 60.1 92 39.1
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.6e-07 59.3 102 34.3
Sc03g0001440 Simmondsia chinensis HOM05D012520 ORTHO05D013638 1.6e-07 59.3 84 39.3
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 2.1e-07 58.9 92 37.0
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 2.7e-07 58.5 102 40.2
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 7.9e-07 57.0 91 39.6
Cpa.g.sc55.176 Carica papaya HOM05D007434 ORTHO05D009541 7.9e-07 57.0 78 47.4
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 1.0e-06 56.6 93 36.6
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.0e-06 56.6 93 36.6
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 1.3e-06 56.2 94 38.3
Migut.H00450 Erythranthe guttata HOM05D018578 ORTHO05D020597 1.8e-06 55.8 77 39.0
HanXRQChr12g0379321 Helianthus annuus HOM05D021427 ORTHO05D022523 1.8e-06 55.8 87 44.8
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 1.8e-06 55.8 83 41.0
DCAR_010906 Daucus carota HOM05D007434 ORTHO05D009541 3.0e-06 55.1 91 35.2
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 3.0e-06 55.1 102 39.2
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 5.1e-06 54.3 86 37.2
Manes.18G033800 Manihot esculenta HOM05D011848 ORTHO05D012195 5.1e-06 54.3 69 44.9
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 6.7e-06 53.9 111 34.2
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 8.7e-06 53.5 85 36.5
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 8.7e-06 53.5 100 36.0
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 8.7e-06 53.5 91 38.5


User provided reference genes

Program Settings