Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 3.3e-121 438.3 214 100.0
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 6.5e-61 238.0 222 63.1
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 4.4e-57 225.3 221 58.4
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 5.7e-57 224.9 212 62.7
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 4.8e-56 221.9 221 61.1
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 6.3e-56 221.5 230 57.0
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.8e-55 219.9 224 58.9
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 3.1e-55 219.2 221 60.2
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 4.1e-55 218.8 225 58.2
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 5.4e-55 218.4 227 57.7
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 5.4e-55 218.4 227 58.1
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 9.1e-55 217.6 222 59.5
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 1.2e-54 217.2 221 58.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 1.2e-54 217.2 221 58.8
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 1.2e-54 217.2 222 59.0
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.6e-54 216.9 232 56.5
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 2.0e-54 216.5 224 57.6
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 2.7e-54 216.1 225 58.7
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.5e-54 215.7 232 56.5
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 4.5e-54 215.3 226 55.3
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 5.9e-54 214.9 232 55.2
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 5.9e-54 214.9 232 56.9
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 5.9e-54 214.9 221 57.9
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.0e-53 214.2 221 59.3
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 1.3e-53 213.8 224 56.2
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 1.3e-53 213.8 228 57.0
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.7e-53 213.4 174 67.8
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.2e-53 213.0 232 56.0
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 2.2e-53 213.0 237 55.7
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 5.0e-53 211.8 227 55.5
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 6.5e-53 211.5 221 57.0
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 8.5e-53 211.1 221 57.5
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.5e-52 210.3 227 58.1
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 2.5e-52 209.5 236 54.7
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 4.2e-52 208.8 237 53.2
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 4.2e-52 208.8 202 57.4
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 4.2e-52 208.8 221 57.5
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 4.2e-52 208.8 151 73.5
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 4.2e-52 208.8 226 58.0
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 5.5e-52 208.4 228 56.6
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 5.5e-52 208.4 228 56.6
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 9.4e-52 207.6 246 54.5
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.6e-51 206.8 224 54.0
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 2.1e-51 206.5 191 59.7
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 2.1e-51 206.5 224 54.9
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 2.7e-51 206.1 224 54.0
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 3.6e-51 205.7 227 56.4
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 3.6e-51 205.7 223 54.3
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 3.6e-51 205.7 178 64.6
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 4.7e-51 205.3 230 55.2
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 6.1e-51 204.9 177 64.4
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.4e-50 203.8 230 57.0
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 2.3e-50 203.0 149 71.1
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 2.3e-50 203.0 188 61.2
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 4.0e-50 202.2 218 56.4
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 5.2e-50 201.8 160 69.4
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 5.2e-50 201.8 230 54.8
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 6.8e-50 201.4 203 56.7
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.2e-49 200.7 225 54.7
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 3.4e-49 199.1 145 73.1
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 4.4e-49 198.7 232 51.7
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 7.5e-49 198.0 238 52.5
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 7.5e-49 198.0 226 54.4
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 1.3e-48 197.2 189 59.8
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.3e-48 197.2 144 73.6
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 2.2e-48 196.4 225 53.8
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 3.7e-48 195.7 162 66.7
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 3.7e-48 195.7 233 53.6
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.9e-48 195.3 247 49.4
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 4.9e-48 195.3 183 60.7
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 4.9e-48 195.3 236 52.5
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.1e-47 194.1 181 59.1
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.4e-47 193.7 246 49.6
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 3.1e-47 192.6 232 51.3
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 3.1e-47 192.6 279 44.8
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 4.1e-47 192.2 153 68.6
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 7.0e-47 191.4 153 68.0
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 7.0e-47 191.4 217 53.9
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 9.2e-47 191.0 283 45.9
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 9.2e-47 191.0 153 68.6
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.6e-46 190.3 151 68.2
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 2.0e-46 189.9 153 67.3
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 2.7e-46 189.5 165 64.2
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 5.9e-46 188.3 203 55.2
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 1.3e-45 187.2 153 67.3
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 1.3e-45 187.2 153 67.3
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.7e-45 186.8 153 66.7
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 1.7e-45 186.8 158 65.2
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 1.7e-45 186.8 153 66.7
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 1.7e-45 186.8 153 66.7
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.9e-45 186.0 268 47.4
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.9e-45 186.0 209 54.5
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 3.8e-45 185.7 157 65.0
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 5.0e-45 185.3 228 52.6
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 6.6e-45 184.9 214 53.7
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 6.6e-45 184.9 148 68.2
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 6.6e-45 184.9 156 64.7
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 8.6e-45 184.5 210 54.8
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 7.3e-44 181.4 214 54.2
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 3.6e-43 179.1 203 53.7
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 4.7e-43 178.7 140 67.1
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 8.0e-43 177.9 120 75.0
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 2.3e-42 176.4 226 49.6
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 3.0e-42 176.0 217 48.4
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.0e-42 176.0 151 62.3
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 3.0e-42 176.0 198 53.0
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.8e-42 174.9 149 63.1
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 8.9e-42 174.5 206 51.0
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 8.9e-42 174.5 166 58.4
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 1.5e-41 173.7 160 62.5
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 1.5e-41 173.7 214 51.4
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.4e-41 172.6 302 41.7
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 5.7e-41 171.8 154 59.1
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 9.8e-41 171.0 217 50.7
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 4.9e-40 168.7 129 68.2
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.4e-39 167.2 201 46.8
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 1.4e-39 167.2 164 53.7
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 2.7e-38 162.9 232 48.3
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 3.0e-37 159.5 115 69.6
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 5.0e-37 158.7 160 58.1
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 1.9e-36 156.8 133 65.4
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 2.5e-36 156.4 200 51.5
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.2e-35 154.1 139 61.9
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 6.2e-35 151.8 221 47.1
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.2e-33 147.5 129 61.2
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 4.4e-33 145.6 122 59.8
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 5.8e-33 145.2 147 53.7
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.7e-32 143.7 131 60.3
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 8.3e-32 141.4 148 54.7
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.1e-31 141.0 178 52.2
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 4.1e-31 139.0 148 54.7
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 1.2e-30 137.5 141 53.9
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 1.2e-30 137.5 145 56.6
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 1.7e-29 133.7 187 49.2
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 6.6e-29 131.7 151 51.7
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 1.1e-28 131.0 147 48.3
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.9e-28 130.2 141 54.6
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 9.5e-28 127.9 179 48.6
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 2.8e-27 126.3 109 62.4
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.8e-26 123.6 174 49.4
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.8e-26 123.6 137 54.0
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 2.0e-25 120.2 187 46.0
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 4.4e-25 119.0 101 65.3
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 3.9e-21 105.9 122 46.7
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.9e-20 103.6 147 43.5
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 4.3e-20 102.4 62 80.6
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.2e-16 90.1 88 53.4
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 6.4e-16 88.6 120 43.3
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 6.0e-14 82.0 105 39.0
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.5e-09 67.4 40 80.0
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 9.9e-09 64.7 93 44.1


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