Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 4.3e-217 757.7 378 100.0
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 4.8e-200 701.0 369 91.9
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.4e-198 694.9 374 90.6
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 3.4e-198 694.9 370 90.3
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 5.0e-197 691.0 373 91.2
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 8.5e-197 690.3 367 91.6
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 2.5e-196 688.7 369 90.8
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.2e-195 686.4 368 92.1
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 3.6e-195 684.9 374 89.8
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 3.0e-194 681.8 370 89.2
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 3.9e-194 681.4 363 91.2
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 4.1e-191 671.4 370 89.5
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 6.5e-189 664.1 363 87.9
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.5e-188 662.9 371 87.6
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.2e-187 659.8 372 85.2
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.7e-187 658.7 364 87.6
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 5.2e-186 654.4 372 87.1
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.5e-185 652.9 366 86.1
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 3.3e-185 651.7 369 86.4
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.7e-184 649.4 366 85.8
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.7e-184 648.3 370 85.1
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 4.8e-184 647.9 368 85.6
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 6.3e-184 647.5 363 86.0
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 6.3e-184 647.5 363 86.0
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 8.2e-184 647.1 369 85.6
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 8.2e-184 647.1 366 85.8
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.1e-183 646.7 363 86.5
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.4e-183 646.4 368 85.1
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 5.3e-183 644.4 372 84.9
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 5.3e-183 644.4 372 84.4
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 9.1e-183 643.7 374 84.2
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.2e-182 643.3 370 84.9
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 2.0e-182 642.5 369 84.3
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 2.7e-182 642.1 364 84.1
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.3e-181 639.8 366 83.9
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.3e-181 639.8 363 85.1
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 1.1e-180 636.7 363 85.1
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 5.5e-180 634.4 368 82.1
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 9.4e-180 633.6 363 83.2
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 9.4e-180 633.6 365 83.6
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 1.6e-179 632.9 370 82.4
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 1.6e-179 632.9 364 84.1
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.1e-179 632.5 362 83.1
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 4.7e-179 631.3 368 82.6
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 5.2e-178 627.9 402 79.6
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 6.8e-178 627.5 363 82.6
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.0e-177 625.9 368 81.8
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.0e-177 625.9 365 82.7
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 7.5e-177 624.0 362 80.4
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 9.8e-177 623.6 361 80.9
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.2e-176 622.5 365 82.5
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 2.8e-176 622.1 361 82.5
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.7e-176 621.7 365 82.2
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 4.8e-176 621.3 362 81.2
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 8.3e-176 620.5 365 81.9
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.1e-175 620.2 363 81.8
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 7.7e-174 614.0 373 81.0
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 7.7e-174 614.0 363 81.8
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 2.9e-173 612.1 364 80.8
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 2.5e-172 609.0 362 82.0
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.5e-172 609.0 353 82.2
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 4.2e-172 608.2 380 78.4
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 5.7e-169 597.8 364 78.8
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 2.2e-168 595.9 371 78.2
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 4.9e-168 594.7 366 79.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 3.1e-167 592.0 367 77.9
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 2.7e-166 589.0 370 77.3
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 3.5e-166 588.6 370 77.3
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 5.9e-166 587.8 369 77.2
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 5.9e-166 587.8 376 76.6
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.3e-165 586.6 370 76.5
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 2.9e-165 585.5 369 76.4
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.9e-165 585.5 369 76.7
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 2.9e-165 585.5 379 75.5
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 6.6e-165 584.3 380 75.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.1e-164 583.6 364 76.6
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 3.3e-164 582.0 370 76.8
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 6.1e-163 577.8 385 74.3
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 6.1e-163 577.8 365 77.8
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 2.0e-161 572.8 364 76.4
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 2.7e-158 562.4 352 76.1
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.0e-157 558.1 357 76.5
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.1e-156 557.0 364 73.6
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 7.0e-151 537.7 301 88.0
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 9.2e-151 537.3 370 70.8
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 8.1e-147 524.2 303 83.8
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 2.0e-145 519.6 285 89.5
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 5.4e-143 511.5 285 87.4
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 3.5e-142 508.8 272 89.7
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.1e-140 503.8 365 66.3
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 2.3e-138 496.1 366 66.1
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.9e-135 486.5 366 64.5
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 3.9e-133 478.8 277 84.1
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 5.1e-133 478.4 367 64.0
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.5e-129 466.8 306 75.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 9.6e-116 421.0 242 85.1
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 4.8e-115 418.7 230 87.8
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.2e-113 414.1 233 83.7
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.1e-110 403.3 416 53.6
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.5e-108 397.1 223 83.9
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 5.9e-89 332.0 180 87.8
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 1.5e-68 264.2 212 64.2
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 2.6e-52 210.3 122 82.0
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 3.4e-52 209.9 120 82.5
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.4e-50 204.5 126 77.8
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.5e-47 194.5 126 75.4
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.5e-47 193.7 136 70.6
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.2e-46 191.4 123 74.0
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.2e-46 191.4 123 74.0
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.0e-44 184.1 136 68.4
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 2.2e-35 154.1 95 76.8
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 6.4e-35 152.5 96 79.2
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 5.4e-18 96.3 69 65.2
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.2e-14 85.1 54 77.8
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 2.1e-14 84.3 54 75.9
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 2.8e-14 84.0 54 77.8
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.5e-12 78.2 54 72.2
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.3e-11 75.1 279 25.8
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 7.8e-09 65.9 206 27.7
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 6.6e-08 62.8 43 65.1
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 2.5e-07 60.8 64 50.0


User provided reference genes

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