Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.7e-151 539.3 273 100.0
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 5.5e-121 438.0 276 82.2
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 3.6e-120 435.3 276 80.1
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 5.1e-119 431.4 274 81.8
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.1e-118 430.3 275 78.9
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 2.2e-114 416.0 275 79.6
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 6.5e-114 414.5 276 79.3
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 3.2e-113 412.1 276 78.6
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 2.7e-112 409.1 277 75.8
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.5e-107 393.3 287 72.8
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 5.5e-105 384.8 273 70.3
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 7.2e-105 384.4 273 70.3
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.0e-103 380.6 274 71.9
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 3.9e-103 378.6 271 71.2
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 5.2e-103 378.3 277 71.5
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 6.7e-103 377.9 270 71.5
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 8.8e-103 377.5 273 71.4
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.1e-102 377.1 270 71.5
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 1.1e-102 377.1 281 71.9
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.6e-102 375.9 267 71.5
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 9.7e-102 374.0 273 71.4
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 4.8e-101 371.7 277 70.8
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.1e-100 370.5 290 67.9
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 5.9e-99 364.8 280 66.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 2.2e-98 362.8 271 67.5
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.1e-97 360.5 290 67.9
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.9e-97 359.8 272 64.7
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 7.2e-97 357.8 272 65.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 9.4e-97 357.5 274 67.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.4e-95 353.6 273 65.9
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 8.8e-95 350.9 271 64.9
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 8.8e-95 350.9 272 64.0
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.0e-94 349.7 304 62.2
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 4.4e-94 348.6 273 68.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 4.4e-94 348.6 306 60.8
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 5.7e-94 348.2 271 66.8
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 5.7e-94 348.2 277 65.3
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 5.7e-94 348.2 277 65.7
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 7.5e-94 347.8 273 65.6
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.3e-93 347.1 296 63.2
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.7e-93 346.7 270 65.6
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.2e-93 346.3 270 63.7
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.2e-93 346.3 270 63.7
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 2.8e-93 345.9 270 63.7
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.8e-93 345.9 333 58.3
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.8e-93 345.9 274 66.4
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.7e-93 345.5 274 65.0
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 4.8e-93 345.1 323 61.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.4e-92 343.6 356 55.3
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.8e-92 343.2 271 65.3
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.8e-92 343.2 270 63.0
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.8e-92 343.2 277 65.0
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 7.0e-92 341.3 272 64.3
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 9.1e-92 340.9 272 62.5
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 1.2e-91 340.5 275 63.3
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 7.7e-91 337.8 267 64.4
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 3.8e-90 335.5 276 64.9
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 5.0e-90 335.1 283 62.5
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 8.5e-90 334.3 313 60.4
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.1e-89 334.0 274 63.5
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.1e-89 334.0 276 63.4
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.9e-89 333.2 258 64.3
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.9e-89 333.2 277 63.2
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 4.7e-88 328.6 274 61.7
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.4e-87 327.0 272 62.9
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 2.3e-87 326.2 210 72.4
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.0e-86 323.2 280 62.5
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 3.4e-86 322.4 264 63.3
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 7.5e-86 321.2 276 60.1
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 9.8e-86 320.9 274 61.7
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 2.2e-85 319.7 233 68.7
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 2.8e-85 319.3 275 62.2
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.8e-84 316.6 244 65.6
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.2e-83 313.9 272 62.1
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.6e-83 313.5 277 63.2
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 3.5e-83 312.4 242 70.2
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.9e-83 311.6 276 60.5
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 5.9e-83 311.6 274 62.8
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 3.8e-82 308.9 229 67.7
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.6e-80 303.5 317 54.6
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 4.0e-79 298.9 202 72.8
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.3e-77 293.9 189 75.7
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 1.3e-77 293.9 194 76.3
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.7e-77 293.5 192 72.9
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 4.9e-77 292.0 275 58.2
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 1.6e-75 287.0 245 60.8
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 2.3e-74 283.1 227 66.1
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 8.6e-74 281.2 192 74.5
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 6.8e-71 271.6 196 67.9
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-70 270.8 231 58.4
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 7.5e-70 268.1 183 69.4
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 9.8e-70 267.7 241 55.6
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 7.0e-68 261.5 194 67.5
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.0e-66 257.7 214 57.5
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 3.0e-66 256.1 268 54.5
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.6e-64 250.4 267 50.9
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 2.3e-63 246.5 305 46.2
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 4.6e-59 232.3 291 50.5
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 6.0e-59 231.9 289 43.3
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 2.3e-58 229.9 130 78.5
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.5e-54 217.2 217 46.5
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 2.6e-54 216.5 166 57.8
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 8.3e-53 211.5 204 49.5
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.6e-51 207.2 165 57.0
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 2.1e-48 196.8 136 74.3
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.1e-44 184.5 187 56.1
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.1e-39 167.9 235 37.0
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 2.3e-34 150.2 191 49.2
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.7e-29 134.0 107 62.6
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.9e-29 132.5 223 39.9
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.3e-21 107.8 56 83.9
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 8.4e-21 105.1 63 79.4
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 4.6e-19 99.4 59 72.9
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.0e-18 98.2 90 54.4
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.8e-18 97.4 101 53.5
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 1.8e-18 97.4 94 56.4
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.6e-16 90.9 79 62.0
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 7.1e-12 75.5 92 51.1
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 9.3e-12 75.1 90 40.0
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 3.9e-10 69.7 81 50.6


User provided reference genes

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