Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0021030 Lotus japonicus HOM05D000256 ORTHO05D000119 5.8e-49 197.2 97 100.0
Lj2g0009295 Lotus japonicus HOM05D000256 ORTHO05D000119 1.0e-37 159.8 101 77.2
Glyma.13G116500 Glycine max HOM05D000256 ORTHO05D000119 1.4e-26 122.9 103 62.1
Phvul.003G125200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.4e-26 122.9 103 62.1
VMungo0420G0002 Vigna mungo HOM05D000256 ORTHO05D000119 1.7e-24 115.9 103 56.3
Lalb_Chr07g0181531 Lupinus albus HOM05D000256 ORTHO05D000119 2.2e-24 115.5 94 59.6
Medtr4g123577 Medicago truncatula HOM05D000256 ORTHO05D000119 3.8e-24 114.8 102 56.9
Eucgr.B02182 Eucalyptus grandis HOM05D000256 ORTHO05D000119 9.3e-23 110.2 98 54.1
Hma1.2p1_0691F.1_g204070 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 9.3e-23 110.2 101 52.5
Manes.01G048300 Manihot esculenta HOM05D000256 ORTHO05D000119 9.3e-23 110.2 97 52.6
Eucgr.L01080 Eucalyptus grandis HOM05D000256 ORTHO05D000119 2.7e-22 108.6 98 53.1
TAR633G1870 Trochodendron aralioides HOM05D000256 ORTHO05D000119 2.7e-22 108.6 108 52.8
Ciclev10023727m.g Citrus clementina HOM05D000256 ORTHO05D000119 6.0e-22 107.5 97 52.6
Thecc.02G043800 Theobroma cacao HOM05D000256 ORTHO05D000119 6.0e-22 107.5 96 52.1
Actinidia25723 Actinidia chinensis HOM05D000256 ORTHO05D000119 1.3e-21 106.3 102 52.0
Gorai.005G259300 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.5e-20 102.8 101 51.5
Atru.chr4.3198 Acer truncatum HOM05D000256 ORTHO05D000119 5.6e-20 100.9 109 48.6
Duzib052G0546 Durio zibethinus HOM05D000256 ORTHO05D000119 5.6e-20 100.9 101 49.5
COL.COLO4_17920 Corchorus olitorius HOM05D000256 ORTHO05D000119 3.7e-19 98.2 101 50.5
PGR031G0330 Punica granatum HOM05D000256 ORTHO05D000119 3.7e-19 98.2 76 57.9
Potri.010G008300 Populus trichocarpa HOM05D000256 ORTHO05D000119 4.8e-19 97.8 99 47.5
MBI18_g28934_MAGBIO Magnolia biondii HOM05D000256 ORTHO05D000119 1.4e-18 96.3 99 45.5
TWI81G0897 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 2.9e-16 88.6 80 43.8
Ca_21355_v3 Cicer arietinum L. HOM05D000256 ORTHO05D000119 8.4e-16 87.0 61 52.5
Nn6g34635 Nelumbo nucifera HOM05D000256 ORTHO05D000119 1.2e-14 83.2 103 40.8
Aqoxy5G00764 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 1.1e-12 76.6 105 39.0
ATR0693G139 Amborella trichopoda HOM05D000256 ORTHO05D000119 1.5e-12 76.3 100 39.0
CiPaw.13G128600 Carya illinoinensis HOM05D000256 ORTHO05D000119 2.5e-12 75.5 94 41.5
COL.COLO4_10970 Corchorus olitorius HOM05D000256 ORTHO05D000119 9.7e-12 73.6 95 38.9
CSS0050460 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 3.7e-11 71.6 104 37.5
Cpa.g.sc146.2 Carica papaya HOM05D000256 ORTHO05D000119 3.7e-11 71.6 105 41.9
TAR365G1093 Trochodendron aralioides HOM05D000256 ORTHO05D000119 3.7e-11 71.6 60 46.7
TAR623G1688 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.8e-11 71.2 95 41.1
Lalb_Chr20g0114951 Lupinus albus HOM05D000256 ORTHO05D000119 8.2e-11 70.5 81 44.4
Cc04_g12610 Coffea canephora HOM05D000256 ORTHO05D000119 1.1e-10 70.1 99 41.4
Lalb_Chr20g0114961 Lupinus albus HOM05D000256 ORTHO05D000119 1.1e-10 70.1 81 44.4
Cc04_g12620 Coffea canephora HOM05D000256 ORTHO05D000119 3.1e-10 68.6 100 41.0
QL01p019403 Quercus lobata HOM05D000256 ORTHO05D000119 6.9e-10 67.4 60 48.3
Cc00_g10840 Coffea canephora HOM05D000256 ORTHO05D000119 2.0e-09 65.9 98 39.8
Lalb_Chr18g0044311 Lupinus albus HOM05D000256 ORTHO05D000119 2.0e-09 65.9 81 40.7
Lalb_Chr22g0360131 Lupinus albus HOM05D000256 ORTHO05D000119 2.0e-09 65.9 81 42.0
Sc22g0002900 Simmondsia chinensis HOM05D000256 ORTHO05D000119 2.0e-09 65.9 103 32.0
unitig_699.g19174 Utricularia gibba HOM05D000256 ORTHO05D000119 2.6e-09 65.5 97 33.0
Manes.09G044300 Manihot esculenta HOM05D000256 ORTHO05D000119 3.4e-09 65.1 98 35.7
Nitab4.5_0004762g0080 Nicotiana tabacum HOM05D000256 ORTHO05D000119 3.4e-09 65.1 102 34.3
TAR623G1279 Trochodendron aralioides HOM05D000256 ORTHO05D000119 4.5e-09 64.7 95 37.9
TPR.G23409 Trifolium pratense HOM05D000256 ORTHO05D000119 7.6e-09 63.9 97 38.1
Haze_20146 Corylus avellana HOM05D000256 ORTHO05D000119 1.0e-08 63.5 60 43.3
MSTRG.12394 Avicennia marina HOM05D000256 ORTHO05D000119 1.3e-08 63.2 98 34.7
Lalb_Chr18g0045921 Lupinus albus HOM05D000256 ORTHO05D000119 1.3e-08 63.2 81 39.5
Migut.N02440 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.7e-08 62.8 106 35.8
TPR.G19335 Trifolium pratense HOM05D000256 ORTHO05D000119 1.7e-08 62.8 97 37.1
Haze_20148 Corylus avellana HOM05D000256 ORTHO05D000119 2.2e-08 62.4 60 43.3
PSO210G2317 Papaver somniferum HOM05D000256 ORTHO05D000119 3.8e-08 61.6 94 34.0
Cpa.g.sc104.9 Carica papaya HOM05D000545 ORTHO05D004272 6.5e-08 60.8 102 34.3
CAN.G742.38 Capsicum annuum HOM05D000256 ORTHO05D000119 1.1e-07 60.1 103 33.0
Thecc.04G096600 Theobroma cacao HOM05D000256 ORTHO05D000119 1.1e-07 60.1 98 34.7
Lalb_Chr18g0044301 Lupinus albus HOM05D000256 ORTHO05D000119 2.5e-07 58.9 81 37.0
Oeu028650.1 Olea europaea HOM05D000256 ORTHO05D000119 3.2e-07 58.5 104 33.7
Ciclev10006552m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.2e-07 58.2 79 39.2
QL07p027457 Quercus lobata HOM05D000256 ORTHO05D000119 5.5e-07 57.8 101 35.6
TPR.G22372 Trifolium pratense HOM05D000256 ORTHO05D000119 5.5e-07 57.8 55 43.6
TPR.G23411 Trifolium pratense HOM05D000256 ORTHO05D000119 5.5e-07 57.8 99 37.4
EL10Ac9g21568 Beta vulgaris HOM05D000256 ORTHO05D000119 7.2e-07 57.4 103 35.0
Aqoxy7G01491 Aquilegia oxysepala HOM05D000256 ORTHO05D000119 9.3e-07 57.0 107 32.7
TPR.G23404 Trifolium pratense HOM05D000256 ORTHO05D000119 9.3e-07 57.0 97 35.1
vmacro22823 Vaccinium macrocarpon HOM05D000256 ORTHO05D000119 9.3e-07 57.0 80 35.0
Lalb_Chr02g0153171 Lupinus albus HOM05D000256 ORTHO05D000119 1.6e-06 56.2 101 33.7
TPR.G8259 Trifolium pratense HOM05D000256 ORTHO05D000119 2.7e-06 55.5 99 36.4
Sopen11g029570 Solanum pennellii HOM05D000256 ORTHO05D000119 3.6e-06 55.1 60 40.0
Nn1g08794 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.6e-06 54.7 81 32.1
CAN.G742.37 Capsicum annuum HOM05D000256 ORTHO05D000119 6.1e-06 54.3 61 39.3
Lalb_Chr15g0076211 Lupinus albus HOM05D000256 ORTHO05D000119 6.1e-06 54.3 77 39.0


User provided reference genes

Program Settings