Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 1.7e-210 735.7 368 100.0
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 6.7e-114 414.8 379 61.5
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 3.4e-110 402.5 387 59.2
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 1.7e-109 400.2 410 56.8
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 2.6e-105 386.3 389 58.1
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 8.8e-98 361.3 482 44.0
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 4.4e-97 359.0 407 54.5
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 2.2e-96 356.7 385 54.5
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 1.1e-92 344.4 404 51.7
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 2.5e-92 343.2 520 41.0
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 2.0e-89 333.6 385 51.7
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 5.9e-70 268.9 434 42.9
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 4.3e-68 262.7 445 43.1
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 2.6e-65 253.4 424 41.5
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 6.0e-62 242.3 469 38.4
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 9.5e-60 235.0 362 42.3
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 9.5e-60 235.0 455 37.6
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.2e-59 234.6 420 38.8
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 3.4e-57 226.5 427 38.2
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 5.8e-57 225.7 428 38.8
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 2.9e-56 223.4 438 38.1
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 2.9e-56 223.4 255 51.0
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 3.7e-56 223.0 426 38.0
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 1.9e-55 220.7 436 39.7
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 4.1e-55 219.5 249 53.0
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 4.6e-54 216.1 395 39.0
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 7.8e-54 215.3 244 54.5
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 7.8e-54 215.3 244 54.5
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 7.8e-54 215.3 439 35.8
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 1.0e-53 214.9 434 36.4
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 3.9e-53 213.0 430 36.7
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 6.6e-53 212.2 222 57.2
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 8.6e-53 211.8 467 33.6
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.5e-52 211.1 408 38.5
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 1.6e-51 207.6 406 36.7
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 4.7e-51 206.1 383 38.9
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 1.4e-50 204.5 419 38.2
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 1.4e-50 204.5 419 35.6
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 1.8e-50 204.1 414 35.0
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 8.9e-50 201.8 428 36.7
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.2e-49 201.4 465 33.3
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 3.4e-49 199.9 261 47.9
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 4.4e-49 199.5 448 35.7
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.3e-48 198.0 226 54.9
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.3e-48 198.0 427 36.5
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.2e-48 197.2 434 34.8
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 1.1e-47 194.9 423 34.8
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 1.9e-47 194.1 447 35.6
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 9.2e-47 191.8 431 34.3
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 1.2e-46 191.4 370 37.0
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 3.5e-46 189.9 396 36.9
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 4.6e-46 189.5 452 32.5
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 1.3e-45 188.0 461 32.3
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.3e-45 188.0 433 33.9
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 1.7e-45 187.6 436 34.4
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 3.9e-45 186.4 464 31.9
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 1.1e-44 184.9 431 35.5
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 2.5e-44 183.7 428 33.2
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 5.6e-44 182.6 460 32.6
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 1.6e-43 181.0 453 31.1
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 2.1e-43 180.6 423 34.8
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 2.1e-43 180.6 444 33.3
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 1.8e-42 177.6 443 33.2
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 4.0e-42 176.4 444 34.0
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 5.2e-42 176.0 469 31.8
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 6.8e-42 175.6 452 31.4
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.2e-41 174.9 455 33.2
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.2e-41 174.9 455 33.2
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 1.5e-41 174.5 434 33.6
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 2.0e-41 174.1 446 32.5
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 2.6e-41 173.7 464 31.5
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 1.3e-40 171.4 437 31.4
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 1.7e-40 171.0 452 31.9
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 3.8e-40 169.9 429 32.9
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 3.8e-40 169.9 286 39.2
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 1.0e-37 161.8 203 42.4
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 3.0e-37 160.2 482 32.0
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 5.1e-37 159.5 470 31.1
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 3.3e-36 156.8 171 47.4
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 2.4e-34 150.6 186 47.8
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 9.0e-34 148.7 451 29.0
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 3.4e-33 146.7 359 33.1
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.7e-32 144.4 249 39.8
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 4.2e-31 139.8 352 34.4
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 3.3e-28 130.2 196 43.4
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 7.3e-28 129.0 245 37.1
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 1.3e-27 128.3 136 52.2
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 2.1e-27 127.5 221 37.1
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 3.6e-27 126.7 122 54.1
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 2.2e-24 117.5 143 42.7
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 1.1e-23 115.2 181 41.4
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 1.9e-23 114.4 199 38.2
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 9.3e-23 112.1 174 39.7
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 1.2e-22 111.7 79 69.6
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 1.3e-21 108.2 118 50.8
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 6.7e-21 105.9 255 34.1
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 4.3e-20 103.2 188 36.7
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 7.6e-17 92.4 97 53.6
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 1.4e-15 88.2 83 54.2
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.9e-15 87.8 139 36.0
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.9e-15 87.8 139 36.0
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 1.6e-14 84.7 421 24.9
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 2.1e-14 84.3 56 67.9
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 2.3e-13 80.9 134 37.3
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 1.9e-12 77.8 192 29.7
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 5.6e-12 76.3 74 48.6
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 1.1e-07 62.0 81 38.3
VMungo0720G2542 Vigna mungo HOM05D059265 ORTHO05D008590 5.5e-07 59.7 116 32.8
PSO339G5387 Papaver somniferum HOM05D007068 ORTHO05D008590 6.1e-06 56.2 149 28.9


User provided reference genes

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