Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 7.5e-33 143.3 73 100.0
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 2.0e-22 108.6 69 75.4
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 2.0e-22 108.6 68 77.9
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 7.7e-22 106.7 68 75.0
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 5.0e-21 104.0 71 74.6
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 1.9e-20 102.1 68 73.5
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 9.5e-20 99.8 70 71.4
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 2.8e-16 88.2 72 68.1
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 8.3e-16 86.7 67 64.2
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 5.9e-14 80.5 67 59.7
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 1.7e-13 79.0 79 58.2
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 1.9e-12 75.5 69 60.9
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 7.3e-12 73.6 79 50.6
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 1.2e-11 72.8 78 50.0
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 3.6e-11 71.2 79 49.4
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 4.7e-11 70.9 79 48.1
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 1.0e-10 69.7 68 52.9
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.4e-10 69.3 76 52.6
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.8e-10 68.9 78 51.3
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 2.3e-10 68.6 80 50.0
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 3.1e-10 68.2 80 53.8
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 3.1e-10 68.2 75 49.3
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.0e-10 67.8 80 50.0
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 5.2e-10 67.4 81 48.1
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 5.2e-10 67.4 80 50.0
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 8.9e-10 66.6 79 45.6
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 1.5e-09 65.9 80 46.2
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 1.5e-09 65.9 80 47.5
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 1.5e-09 65.9 71 52.1
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 1.5e-09 65.9 70 54.3
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.0e-09 65.5 79 49.4
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 7.5e-09 63.5 79 44.3
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 9.8e-09 63.2 80 46.2
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 1.3e-08 62.8 78 47.4
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.7e-08 62.4 76 48.7
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.7e-08 62.4 76 46.1
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 2.2e-08 62.0 79 45.6
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 3.7e-08 61.2 75 48.0
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 3.7e-08 61.2 75 45.3
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 4.9e-08 60.8 85 47.1
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 6.4e-08 60.5 50 58.0
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 8.3e-08 60.1 69 47.8
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 8.3e-08 60.1 80 46.2
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.1e-07 59.7 80 43.8
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.1e-07 59.7 79 45.6
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 1.1e-07 59.7 80 48.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.4e-07 59.3 79 45.6
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.4e-07 59.3 78 47.4
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 1.4e-07 59.3 66 50.0
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 1.4e-07 59.3 80 48.8
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 1.9e-07 58.9 66 50.0
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 1.9e-07 58.9 77 48.1
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.9e-07 58.9 79 44.3
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 2.4e-07 58.5 66 48.5
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 3.2e-07 58.2 68 45.6
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 4.1e-07 57.8 79 41.8
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.1e-07 57.8 79 44.3
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 5.4e-07 57.4 66 48.5
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 5.4e-07 57.4 80 46.2
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 7.0e-07 57.0 80 46.2
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 7.0e-07 57.0 79 48.1
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.0e-07 57.0 77 45.5
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 7.0e-07 57.0 77 45.5
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 1.6e-06 55.8 65 44.6
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 2.0e-06 55.5 65 44.6
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 2.7e-06 55.1 78 41.0
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.7e-06 55.1 78 46.2
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 2.7e-06 55.1 74 47.3
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 3.5e-06 54.7 65 47.7
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.5e-06 54.7 83 41.0
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.5e-06 54.7 78 46.2
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 4.6e-06 54.3 74 43.2
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 4.6e-06 54.3 65 44.6
AT1G62045 Arabidopsis thaliana HOM05D007037 ORTHO05D006691 6.0e-06 53.9 65 53.8
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 6.0e-06 53.9 81 42.0


User provided reference genes

Program Settings