Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 3.2e-93 345.1 180 100.0
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 3.1e-72 275.4 191 75.4
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 3.6e-68 261.9 181 76.2
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 4.8e-65 251.5 181 72.4
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 3.1e-64 248.8 183 75.4
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 2.9e-62 242.3 183 72.1
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 9.4e-61 237.3 176 70.5
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 1.6e-60 236.5 182 66.5
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.1e-60 236.1 174 71.8
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.7e-60 235.7 176 69.9
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 3.0e-59 232.3 182 68.1
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 3.0e-59 232.3 180 71.1
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 9.7e-58 227.3 163 72.4
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 1.4e-56 223.4 180 63.3
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 1.8e-56 223.0 189 65.6
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.4e-56 222.6 191 61.3
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 5.3e-56 221.5 182 65.4
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 9.1e-56 220.7 180 62.2
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.5e-55 219.9 182 65.9
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 2.6e-55 219.2 177 66.7
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.2e-54 216.1 180 61.1
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 3.8e-54 215.3 153 71.9
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.1e-53 213.8 156 67.3
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 3.2e-53 212.2 176 67.0
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 2.1e-52 209.5 175 64.6
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 3.6e-52 208.8 188 61.2
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 4.7e-52 208.4 146 70.5
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 8.8e-51 204.1 171 64.9
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 8.8e-51 204.1 168 61.9
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 1.1e-50 203.8 183 60.7
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.1e-50 203.8 181 58.6
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 1.5e-50 203.4 165 62.4
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 2.0e-50 203.0 139 71.2
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 3.3e-50 202.2 178 60.7
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 5.7e-50 201.4 168 63.1
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 1.3e-49 200.3 139 69.1
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-49 199.9 139 68.3
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-49 199.9 139 69.1
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 1.4e-48 196.8 177 58.8
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 2.4e-48 196.1 172 60.5
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 3.1e-48 195.7 138 67.4
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 3.1e-48 195.7 148 67.6
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 5.3e-48 194.9 140 68.6
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 7.0e-48 194.5 180 58.9
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 5.9e-47 191.4 169 60.4
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 7.7e-47 191.0 165 62.4
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.7e-46 189.9 171 57.3
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 3.8e-46 188.7 150 63.3
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 5.0e-46 188.3 152 61.8
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.9e-45 186.4 151 62.3
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.9e-45 186.4 151 62.3
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.5e-45 186.0 143 64.3
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 3.2e-45 185.7 139 67.6
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 4.2e-45 185.3 183 57.4
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 5.5e-45 184.9 150 60.7
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.2e-44 183.7 134 67.9
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 2.1e-44 183.0 179 55.3
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 2.7e-44 182.6 145 62.1
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 4.7e-44 181.8 171 55.6
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 6.1e-44 181.4 144 62.5
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 6.1e-44 181.4 143 64.3
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 8.0e-44 181.0 167 56.9
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 2.3e-43 179.5 141 63.1
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 3.0e-43 179.1 145 60.7
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 3.0e-43 179.1 139 61.9
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 5.2e-43 178.3 143 65.7
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 5.2e-43 178.3 143 65.7
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 6.7e-43 177.9 140 61.4
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.5e-42 176.8 143 65.0
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.0e-42 176.4 180 53.9
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 3.3e-42 175.6 166 54.8
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 9.7e-42 174.1 169 56.2
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 2.2e-41 172.9 143 60.1
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 2.0e-39 166.4 133 63.9
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.5e-39 165.6 124 63.7
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 4.5e-39 165.2 124 69.4
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 5.9e-39 164.9 151 58.3
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.3e-38 163.7 167 56.3
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 2.2e-38 162.9 171 52.0
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 5.0e-38 161.8 184 50.5
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 9.4e-37 157.5 128 64.8
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 1.5e-34 150.2 113 63.7
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 7.0e-32 141.4 116 62.9
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 1.7e-30 136.7 113 58.4
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 3.8e-30 135.6 110 61.8
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 5.0e-30 135.2 167 49.1
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.5e-29 133.7 101 74.3
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.9e-29 133.3 110 60.9
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.1e-28 129.8 119 58.8
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 5.2e-27 125.2 87 67.8
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 5.2e-27 125.2 151 42.4
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 4.9e-25 118.6 88 64.8
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 5.9e-23 111.7 105 53.3
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 9.5e-21 104.4 124 46.8
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 8.0e-20 101.3 101 53.5
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.4e-19 100.5 77 67.5
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 4.9e-17 92.0 174 34.5
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 1.3e-14 84.0 110 40.9
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 2.3e-14 83.2 68 57.4
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 2.3e-14 83.2 123 38.2
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 5.2e-11 72.0 92 42.4


User provided reference genes

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